BLASTX nr result
ID: Coptis21_contig00013100
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00013100 (1915 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002319493.1| predicted protein [Populus trichocarpa] gi|2... 350 6e-94 ref|XP_002330183.1| predicted protein [Populus trichocarpa] gi|2... 340 6e-91 ref|XP_002278421.1| PREDICTED: uncharacterized protein LOC100240... 339 2e-90 ref|XP_002512479.1| splicing factor, arginine/serine-rich 2,rnap... 311 5e-82 ref|NP_187218.1| RING/U-box protein [Arabidopsis thaliana] gi|67... 306 1e-80 >ref|XP_002319493.1| predicted protein [Populus trichocarpa] gi|222857869|gb|EEE95416.1| predicted protein [Populus trichocarpa] Length = 810 Score = 350 bits (899), Expect = 6e-94 Identities = 215/513 (41%), Positives = 285/513 (55%), Gaps = 43/513 (8%) Frame = +1 Query: 157 DDDFDLDYKAVRERNRTKSVIK----------DWVSDDSEPSDVEYTLSDEEKELLREAN 306 D DF D RE+++ S ++ D+VS+ S SD EYTLS+EE+E +REA+ Sbjct: 213 DGDFLADSPVAREKSKKTSGVRKRKFSVNSDSDFVSNGS--SDYEYTLSEEEREQVREAS 270 Query: 307 KFLGISTTCSRDSSLNGKLHKDGASKCLKPTPVERKGKQKVHELHIDTGKQVCGICFSEE 486 + G T R SS+ ++ ++G C + PV RKGK+KV E + GKQVCGIC SEE Sbjct: 271 QLYGELKTSLRSSSVGKRIQENG-DLCQQTKPVGRKGKEKVKEEKSELGKQVCGICLSEE 329 Query: 487 RKGIVRGTLNCCSHYFCYACIMEWSKIESRCPLCKQRFVTISMPERSKLGVELRSLVIPI 666 K +RGTL+CCSHYFC+ CIMEWSK+ESRCPLCKQRF TI+ RS +GV+LR++VI + Sbjct: 330 DKRRLRGTLDCCSHYFCFTCIMEWSKVESRCPLCKQRFSTIAKNGRSAMGVDLRNMVIEV 389 Query: 667 PTRDQVYQPTEEEVMGYLDPYDGVVCIECQEGGDDSLMLLCDICDSPSHTYCVGLGQEVP 846 P RDQVYQPTEEE+ Y+DPY+ V+C EC EGGDD LMLLCD+CDS +HTYCVGLG++VP Sbjct: 390 PMRDQVYQPTEEEIRSYIDPYENVICKECHEGGDDGLMLLCDLCDSSAHTYCVGLGRQVP 449 Query: 847 EGNWYCKGCRISEPGSSNVLVQDPSLGTSSNSIPTYLTSQRMSVNDLDPTPQAVSALDPS 1026 EGNWYC CR GS++ QDP +P S N P LDP+ Sbjct: 450 EGNWYCDDCRPVALGSTSSQAQDP--------LPDQWNSSNNIFNRPSPILNLDEGLDPN 501 Query: 1027 LFRENEI--------LPSPRSIVGDDVHLVSPSGI-GVSTLSGRRRIHRQIRSMLSN-NR 1176 L + L SPR + GD +H+ SP + G STLSGRR +HR IR++LSN N Sbjct: 502 LESAPRLTIPQVSGSLSSPRFLTGD-IHVASPVSVAGASTLSGRRHLHRHIRTLLSNRNP 560 Query: 1177 VSHTTEVPRRIDDNIESEIVADSEDEQ--------LEKTTTQLAGPSASNGFHSDGFEVW 1332 ++ V RID + + +D + Q L+ TQ G S + + Sbjct: 561 SANMNPVANRIDVISAASLHSDFLNSQIDPVRETALQNLRTQEIGTSEQT---PNKERLQ 617 Query: 1333 AQDASPSSLLEIDH---TAAQSSRSSNFEGNGSASQQS------------NSVFGFQQLQ 1467 A D SS D T QS R + + + + + NS+ GF+Q Sbjct: 618 ANDHPSSSFQNRDSYYLTPNQSRRQTVQDPTITTADRPVNLTLWPDLMGINSIPGFEQSH 677 Query: 1468 HHRSSLFSWPDDCEFPRQRRSSSSHFQVENPLE 1566 RS + PD Q R S + V+ L+ Sbjct: 678 QFRSRSSTEPDGTLSSYQVREQSQFYDVKEQLQ 710 >ref|XP_002330183.1| predicted protein [Populus trichocarpa] gi|222871639|gb|EEF08770.1| predicted protein [Populus trichocarpa] Length = 735 Score = 340 bits (873), Expect = 6e-91 Identities = 191/383 (49%), Positives = 245/383 (63%), Gaps = 14/383 (3%) Frame = +1 Query: 157 DDDFDLDYKAVRERNRTKSVI---KDWVSDDSE-----PSDVEYTLSDEEKELLREANKF 312 D DF D VRE+++ S + K V+ DS+ SD +YT+S+EE+EL+REAN+F Sbjct: 139 DGDFLADSSIVREKSKKHSGVRKRKFAVNSDSDFLSNGSSDYDYTISEEERELVREANQF 198 Query: 313 LGISTTCSRDSSLNGKLHKDGASKCLKPTPVERKGKQKVHELHIDTGKQVCGICFSEERK 492 + T S SS GK ++ C + P+ RKGK+KV E+ + G+QVCGIC SEE K Sbjct: 199 GELKT--SLRSSSAGKRFQENGDLCEQTKPLGRKGKEKVDEVKSELGRQVCGICLSEEDK 256 Query: 493 GIVRGTLNCCSHYFCYACIMEWSKIESRCPLCKQRFVTISMPERSKLGVELRSLVIPIPT 672 RGTL+CCSHYFC+ CIMEWSK+ESRCPLCKQRF TI+ RS +GV+LR++VI +P Sbjct: 257 RRFRGTLDCCSHYFCFTCIMEWSKVESRCPLCKQRFRTITKNGRSIVGVDLRNMVIQVPK 316 Query: 673 RDQVYQPTEEEVMGYLDPYDGVVCIECQEGGDDSLMLLCDICDSPSHTYCVGLGQEVPEG 852 RDQVYQPTEEE+ Y+DPY+ V+C EC EGGDD LMLLCD+CDS +HTYCVGLG++VPEG Sbjct: 317 RDQVYQPTEEEIRSYIDPYENVICKECHEGGDDGLMLLCDLCDSSAHTYCVGLGRQVPEG 376 Query: 853 NWYCKGCRISEPGSSNVLVQDPSLGTSSNSIPTYLTSQRMSVN---DLDPTPQAVSALD- 1020 NWYC CR GSS+ QD SL N + +N LDP ++ L Sbjct: 377 NWYCDDCRPVALGSSSSQTQD-SLPDQWNISSNIFNRPSLMLNLEEGLDPNLESSPRLTV 435 Query: 1021 PSLFRENEILPSPRSIVGDDVHLVSP-SGIGVSTLSGRRRIHRQIRSMLSN-NRVSHTTE 1194 P F L SPR GD+ H+ SP SG G STLSGRR IHR IR +LSN N ++ Sbjct: 436 PQAFGS---LSSPRFPTGDN-HVASPVSGAGASTLSGRRHIHRNIRILLSNMNPSTNMNP 491 Query: 1195 VPRRIDDNIESEIVADSEDEQLE 1263 + RID + + D + Q++ Sbjct: 492 MANRIDVISAASLRGDLSNSQID 514 >ref|XP_002278421.1| PREDICTED: uncharacterized protein LOC100240780 [Vitis vinifera] Length = 733 Score = 339 bits (869), Expect = 2e-90 Identities = 198/434 (45%), Positives = 258/434 (59%), Gaps = 17/434 (3%) Frame = +1 Query: 148 VSSDDDFDLDYKAVRERNRTKSVIKDWVSDDSE-----PSDVEYTLSDEEKELLREANKF 312 V +D DF + VRER K + + DSE SD E+T+S+EE+E +REA++F Sbjct: 153 VDNDGDFIDERPVVRERKSHKRKRRLAPASDSEFVSSGSSDFEFTISEEEREQVREADEF 212 Query: 313 LGISTTCSRDSSLNGKLHKDGASKCLKPTPVERKGKQKVHELHIDTGKQVCGICFSEERK 492 ST R +SL K ++ + P RKGK+KV ++ + GKQVCGIC SEE K Sbjct: 213 CRRSTNNMRSASLPAKTIEE------ERKPPVRKGKEKVEDVKNEVGKQVCGICLSEEGK 266 Query: 493 GIVRGTLNCCSHYFCYACIMEWSKIESRCPLCKQRFVTISMPERSKLGVELRSLVIPIPT 672 VRGTL+CCSHYFC+ CIMEWSK+ESRCPLCKQRF+TIS P R+ G++LR ++I +P Sbjct: 267 RRVRGTLDCCSHYFCFGCIMEWSKVESRCPLCKQRFMTISKPARANTGIDLRDVMIQVPE 326 Query: 673 RDQVYQPTEEEVMGYLDPYDGVVCIECQEGGDDSLMLLCDICDSPSHTYCVGLGQEVPEG 852 RDQVY P+EEE+ GYLDPY+ V+C EC +GGDD LMLLCD+CDSP+HTYCVGLG+EVPEG Sbjct: 327 RDQVYLPSEEEIRGYLDPYENVICTECHQGGDDGLMLLCDLCDSPAHTYCVGLGREVPEG 386 Query: 853 NWYCKGCRISEPGSSNVLVQDPSLGTSSNSIPTYLTSQRMSVNDLDPTPQAVSALDPSLF 1032 NWYC+GCR S+ VQDP L+ R + N L P V + SL Sbjct: 387 NWYCEGCRPSQ-------VQDP------------LSDHRTTQNTLSDRPSPVGNIGESLV 427 Query: 1033 RENEILPSP-RSIVGDDV-------HLVSP-SGIGVSTLSGRRRIHRQIRSMLSNNRVSH 1185 +L +P +G ++ SP S G STLSGRR IHRQI + SNNR+SH Sbjct: 428 TSLSLLSTPFTQGIGINISPRYRNAEAASPVSASGASTLSGRRWIHRQIHQIRSNNRMSH 487 Query: 1186 TTEVPRRIDD---NIESEIVADSEDEQLEKTTTQLAGPSASNGFHSDGFEVWAQDASPSS 1356 R I + N S+ + D+ L+ T +Q + HS E QD S Sbjct: 488 V--AVRNIGNSAPNSGSDFLNSQIDQGLD-TASQHTKALETGTSHSTFLEESLQDNRYPS 544 Query: 1357 LLEIDHTAAQSSRS 1398 L +D + + S+S Sbjct: 545 LQNMDLLSPRLSQS 558 >ref|XP_002512479.1| splicing factor, arginine/serine-rich 2,rnap interacting protein, putative [Ricinus communis] gi|223548440|gb|EEF49931.1| splicing factor, arginine/serine-rich 2,rnap interacting protein, putative [Ricinus communis] Length = 791 Score = 311 bits (796), Expect = 5e-82 Identities = 178/400 (44%), Positives = 249/400 (62%), Gaps = 9/400 (2%) Frame = +1 Query: 223 DWVSDDSEPSDVEYTLSDEEKELLREANKFLGISTTCSRDSSLNGKLHKDGASKCLKPTP 402 D++S S SD EYT+S+EE+E +RE +K G+ T+ SS+ + ++ C + Sbjct: 232 DFMSSGS--SDYEYTISEEEREQVREGSKLFGVKTSLRSSSSI--RKTQESGDLCQQGKS 287 Query: 403 VERKGKQKVHELHIDTGKQVCGICFSEERKGIVRGTLNCCSHYFCYACIMEWSKIESRCP 582 + RKGK+KV E+ + GKQ+CGIC SEE K +RGTL+CCSHYFC+ CIMEWSK+ESRCP Sbjct: 288 LARKGKEKVKEVKPELGKQMCGICLSEEDKRRLRGTLDCCSHYFCFTCIMEWSKVESRCP 347 Query: 583 LCKQRFVTISMPERSKLGVELRSLVIPIPTRDQVYQPTEEEVMGYLDPYDGVVCIECQEG 762 LCKQRF TI+ R+ +GVE R++VI +P RDQVYQP+EEE+ ++DPY+ V+C EC EG Sbjct: 348 LCKQRFKTITKNGRAAVGVEPRNVVIQVPKRDQVYQPSEEEIRSFIDPYENVICTECHEG 407 Query: 763 GDDSLMLLCDICDSPSHTYCVGLGQEVPEGNWYCKGCRISEPGSSNVLVQDPSLG-TSSN 939 G+D LMLLCD+CDSP+HT+CVGLG++VPEGNWYC+ CR GS++ DP ++N Sbjct: 408 GEDGLMLLCDLCDSPAHTFCVGLGRQVPEGNWYCEVCRPVALGSTSSQALDPMPDQRTTN 467 Query: 940 SIPTYLTSQRMSVNDLDPT--PQAVSALDPSLFRENEILPSPRSIVGDDVHLVSP-SGIG 1110 +I + + SV D T P A P L SPR G DV SP SG G Sbjct: 468 NIFSRPSPDTNSVEGFDATSEPSPRLAFAPGF----GSLSSPRFPAG-DVQAASPVSGAG 522 Query: 1111 VSTLSGRRRIHRQIRSMLSNNRVSHTTEVPRRID-DNIESEIVADSEDE----QLEKTTT 1275 STLS RR++HR I++++S +R+ + I N+ ++ D+ ++ + T Sbjct: 523 GSTLSQRRQLHRHIQNLISMSRMHYMANRTDGISAANLHIDLSNPHNDQCRETIVQNSRT 582 Query: 1276 QLAGPSASNGFHSDGFEVWAQDASPSSLLEIDHTAAQSSR 1395 Q G S S F + E A D SS+ D +++SS+ Sbjct: 583 QEIGASQST-FLDERLE--ANDYPSSSMQNGDLFSSRSSQ 619 >ref|NP_187218.1| RING/U-box protein [Arabidopsis thaliana] gi|6714443|gb|AAF26130.1|AC011620_6 unknown protein [Arabidopsis thaliana] gi|21539513|gb|AAM53309.1| unknown protein [Arabidopsis thaliana] gi|27311925|gb|AAO00928.1| unknown protein [Arabidopsis thaliana] gi|332640753|gb|AEE74274.1| RING/U-box protein [Arabidopsis thaliana] Length = 883 Score = 306 bits (784), Expect = 1e-80 Identities = 172/359 (47%), Positives = 224/359 (62%), Gaps = 18/359 (5%) Frame = +1 Query: 157 DDDFDLDYKAVRERNRTKS----------VIKDWVSDDSEPSDVEYTLSDEEKELLREAN 306 DDDF D R++ +TKS V D S SD EYT+S+EE+E +REA Sbjct: 305 DDDFVDDCLPARKKAKTKSSRPRPRRRCTVPSDSDVASSGESDYEYTISEEEREQIREAG 364 Query: 307 KFLGISTTCS---RDSSLNGKLHKDGASKCLKPTPVERKGKQKVHELHIDTGKQVCGICF 477 L S + R +++N L + L+ +PV +KG++KV + D K VCGIC Sbjct: 365 SLLKSSVNHASSIRQTTVNKDLPQ------LRKSPV-KKGEKKVELVKRDVIKNVCGICL 417 Query: 478 SEERKGIVRGTLNCCSHYFCYACIMEWSKIESRCPLCKQRFVTISMPERSKLGVELRSLV 657 SEE ++GTL+CCSHYFC+ CIMEWSK+ESRCPLCKQRF TIS P RS GV+LR +V Sbjct: 418 SEEDMRRLKGTLDCCSHYFCFTCIMEWSKVESRCPLCKQRFRTISKPARSTPGVDLREVV 477 Query: 658 IPIPTRDQVYQPTEEEVMGYLDPYDGVVCIECQEGGDDSLMLLCDICDSPSHTYCVGLGQ 837 IP+P RDQVYQPTEEE+ YLDPY+ ++C EC +G DD LMLLCD+CDS +HTYCVGLG+ Sbjct: 478 IPVPERDQVYQPTEEELRSYLDPYENIICTECHQGDDDGLMLLCDLCDSSAHTYCVGLGR 537 Query: 838 EVPEGNWYCKGCRISEPGSSN-----VLVQDPSLGTSSNSIPTYLTSQRMSVNDLDPTPQ 1002 EVPEGNWYC+GCR GS++ + Q G S P ++ Q V+ + Sbjct: 538 EVPEGNWYCEGCRPVALGSASSQTHIISEQQRGSGFYSRPSPLVVSGQYQDVSLI----- 592 Query: 1003 AVSALDPSLFRENEILPSPRSIVGDDVHLVSPSGIGVSTLSGRRRIHRQIRSMLSNNRV 1179 VS P F E L SPR I D SPSG+G +TLS RR +HR I+++++ +R+ Sbjct: 593 -VSPRTP--FFNGENLFSPR-IPNGDAQGSSPSGLGATTLSRRRTLHRHIQNIINGDRL 647