BLASTX nr result

ID: Coptis21_contig00013099 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013099
         (765 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39695.3| unnamed protein product [Vitis vinifera]               93   7e-17
ref|XP_003633622.1| PREDICTED: uncharacterized protein LOC100855...    91   4e-16
emb|CAN77579.1| hypothetical protein VITISV_015345 [Vitis vinifera]    90   6e-16
ref|XP_002315099.1| predicted protein [Populus trichocarpa] gi|2...    89   8e-16
ref|XP_004170203.1| PREDICTED: uncharacterized protein LOC101230...    70   4e-10

>emb|CBI39695.3| unnamed protein product [Vitis vinifera]
          Length = 394

 Score = 92.8 bits (229), Expect = 7e-17
 Identities = 76/230 (33%), Positives = 114/230 (49%), Gaps = 12/230 (5%)
 Frame = +2

Query: 14  SSTSKGRPSNPSIAST--PRQPIEHPSSV-VPFTNRSSSTSRGRASNPRQPTDQRY---N 175
           S+T  GR S+ S+A T  P+ P+     V +  + RS+  +       +Q +D  +   N
Sbjct: 147 STTPSGR-SSISLAETKNPKGPLILNQKVGIDPSKRSNLGTITSKPTTQQESDANFITTN 205

Query: 176 HVLSNTTKALEKDLAQSISPPKTV-----MAGFFDDTPPNLITNXXXXXXXXXXXXXXXK 340
            + +  T +  K  ++ +SP         + GF D+TPPNL T+                
Sbjct: 206 LLRNMGTDSKMKPTSRGVSPLVRTKIPAQIPGFSDETPPNLKTDRSSSASRGRSCNPVLS 265

Query: 341 KVPIQDPI-QARRQSCSPSMSRGRKPEFSKQERDGDVTTITKKKNQGGGNGSLAFGSSMV 517
                D   + RRQ CSPS++R RK +F KQE +G++TT  +K      NG+   GS MV
Sbjct: 266 SHQKSDSTAKPRRQLCSPSVARNRKVQF-KQESEGNLTT--QKGRTQTANGAQVLGSRMV 322

Query: 518 EKVMNARKLGGEELERTPKFGTPSNENSGFGRFASKGCMDIALKNKHVEK 667
           +KVMNARK G EE E  P       EN  +GR  SK  +D+ALK+  +++
Sbjct: 323 DKVMNARKSGAEERETKPNLRGLITENPAYGRTTSKSSLDMALKHMDIKR 372


>ref|XP_003633622.1| PREDICTED: uncharacterized protein LOC100855297 [Vitis vinifera]
          Length = 185

 Score = 90.5 bits (223), Expect = 4e-16
 Identities = 56/139 (40%), Positives = 75/139 (53%), Gaps = 1/139 (0%)
 Frame = +2

Query: 254 GFFDDTPPNLITNXXXXXXXXXXXXXXXKKVPIQDPI-QARRQSCSPSMSRGRKPEFSKQ 430
           GF D+TPPNL T+                     D   + RRQ CSPS++R RK +F KQ
Sbjct: 28  GFSDETPPNLKTDRSSSASRGRSCNPVLSSHQKSDSTAKPRRQLCSPSVARNRKVQF-KQ 86

Query: 431 ERDGDVTTITKKKNQGGGNGSLAFGSSMVEKVMNARKLGGEELERTPKFGTPSNENSGFG 610
           E +G++TT  +K      NG+   GS MV+KVMNARK G EE E  P       EN  +G
Sbjct: 87  ESEGNLTT--QKGRTQTANGAQVLGSRMVDKVMNARKSGAEERETKPNLRGLITENPAYG 144

Query: 611 RFASKGCMDIALKNKHVEK 667
           R  SK  +D+ALK+  +++
Sbjct: 145 RTTSKSSLDMALKHMDIKR 163


>emb|CAN77579.1| hypothetical protein VITISV_015345 [Vitis vinifera]
          Length = 1494

 Score = 89.7 bits (221), Expect = 6e-16
 Identities = 75/225 (33%), Positives = 111/225 (49%), Gaps = 12/225 (5%)
 Frame = +2

Query: 14  SSTSKGRPSNPSIAST--PRQPIEHPSSV-VPFTNRSSSTSRGRASNPRQPTDQRY---N 175
           S+T  GR S+ S+A T  P+ P+     V +  + RS+  +       +Q +D  +   N
Sbjct: 147 STTPSGR-SSISLAETKNPKGPLILNQKVGIDPSKRSNLGTITSKPTTQQESDANFITTN 205

Query: 176 HVLSNTTKALEKDLAQSISPPKTV-----MAGFFDDTPPNLITNXXXXXXXXXXXXXXXK 340
            + +  T +  K  ++ +SP         + GF D+TPPNL T+                
Sbjct: 206 LLRNMGTDSKMKPTSRGVSPLVRTKIPAQIPGFSDETPPNLKTDRSSSASRGRSCNPVLS 265

Query: 341 KVPIQDPI-QARRQSCSPSMSRGRKPEFSKQERDGDVTTITKKKNQGGGNGSLAFGSSMV 517
                D   + +RQ CSPS++R RK +F KQE +G++TT  +K      NG+   GS MV
Sbjct: 266 SHQKSDSTAKPKRQLCSPSVARNRKVQF-KQESEGNLTT--QKGRTQTANGAQILGSRMV 322

Query: 518 EKVMNARKLGGEELERTPKFGTPSNENSGFGRFASKGCMDIALKN 652
           +KVMNARK G EE E  P       EN  +GR  SK  +D+ALK+
Sbjct: 323 DKVMNARKSGAEERETKPNLRGLITENPAYGRTTSKSSLDMALKH 367


>ref|XP_002315099.1| predicted protein [Populus trichocarpa] gi|222864139|gb|EEF01270.1|
           predicted protein [Populus trichocarpa]
          Length = 407

 Score = 89.4 bits (220), Expect = 8e-16
 Identities = 76/199 (38%), Positives = 102/199 (51%), Gaps = 23/199 (11%)
 Frame = +2

Query: 140 SNPRQPTDQRY---NHVLSNTTKALE-KDLAQSISPP--KTVMA---GFFDDTPPNLITN 292
           +N  +PT+Q+    N + SN +K ++ K   + +SP    T+ A   GF +DTPPNL T+
Sbjct: 193 ANSAKPTNQKSSQTNFLSSNLSKDIKTKPENRGVSPSVRSTIAAQIPGFSNDTPPNLRTD 252

Query: 293 XXXXXXXXXXXXXXXKKV--PIQDPI-QARRQSCSPSMSRGRKPEFSKQERDGDVTTITK 463
                                 QDP  + RRQSCSPS++RGRK      E + +  T +K
Sbjct: 253 RATSATRGRPVAANPTASVRQKQDPAPRPRRQSCSPSVTRGRK------ESNEENLTTSK 306

Query: 464 KKNQGGGNGSLAFGSSMVEKVMNARKLGGEELERTPK-FGTPSNENS--------GFGR- 613
            K   G NG+  FGS MV+KVMNARKLG EE E  PK  G   + NS        GFGR 
Sbjct: 307 GKTVTGNNGAQIFGSRMVDKVMNARKLGAEEREAKPKQQGATKSANSSANASPSHGFGRM 366

Query: 614 -FASKGCMDIALKNKHVEK 667
              +K  MD+A K+  + K
Sbjct: 367 MMTTKSQMDMAFKHMVIAK 385


>ref|XP_004170203.1| PREDICTED: uncharacterized protein LOC101230836, partial [Cucumis
           sativus]
          Length = 435

 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 83/278 (29%), Positives = 123/278 (44%), Gaps = 29/278 (10%)
 Frame = +2

Query: 14  SSTSKGRPSNP-----SIASTPRQPIEHPSSV--VPFTNRSSSTSRGRASNPRQPTDQRY 172
           SST   RP+ P     S ASTP +    PSS    P +   SS+S  + S P    +Q  
Sbjct: 128 SSTPTSRPTIPPPKPTSRASTPTRRPSTPSSASSAPVSLVKSSSSISKPS-PTVSRNQAP 186

Query: 173 NHVLSNTTKALEKDLAQSISPPKTVMAGFFDDTPPNLITNXXXXXXXXXXXXXXXKKVPI 352
           +   S T K+   + ++        M GF  D PPNL T+                    
Sbjct: 187 SRGASPTVKSRPWNPSE--------MPGFTLDAPPNLRTSLPDRPLSVTRGRPGAPSARS 238

Query: 353 Q--DPI---QARRQSCSPSMSRGRKPEFSKQERDGDVTTITKKKNQGGGNGS-LAFGSSM 514
              +P+   + RRQSCSP  SRGR P  +     G V  I +  ++   N S +  G+ M
Sbjct: 239 SSVEPVPNGRPRRQSCSP--SRGRAPNGNIHLSGGSVPAINRMHSKANDNISPVLIGTKM 296

Query: 515 VEKVMNARKLGGEELERTPKFGTP---------SNENSGFGRFASKGCMDIALKNKHVEK 667
           VE+V+N RKL     ++  K  +P         S ++SGFGR  SK  +D+A+++  + +
Sbjct: 297 VERVINMRKL--VPPKQDDKHSSPHGNLSGKSSSPDSSGFGRTLSKKSLDMAIRHMDIRR 354

Query: 668 MSHAN--PVMMNIKTAS-----SDPSKRTSQSHEGSKI 760
               N  P+M NI  +S     S PS+  + S   S +
Sbjct: 355 SIPGNLRPLMTNIPASSMYSVRSGPSRSRTISVSDSPL 392


Top