BLASTX nr result

ID: Coptis21_contig00013085 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013085
         (1034 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302602.1| predicted protein [Populus trichocarpa] gi|2...   107   8e-32
ref|XP_002277369.1| PREDICTED: uncharacterized protein LOC100258...   108   3e-31
emb|CBI40421.3| unnamed protein product [Vitis vinifera]              108   3e-31
ref|XP_003548624.1| PREDICTED: uncharacterized protein LOC100801...    99   6e-28
ref|XP_002511911.1| conserved hypothetical protein [Ricinus comm...    96   1e-24

>ref|XP_002302602.1| predicted protein [Populus trichocarpa] gi|222844328|gb|EEE81875.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score =  107 bits (266), Expect(2) = 8e-32
 Identities = 56/97 (57%), Positives = 72/97 (74%), Gaps = 3/97 (3%)
 Frame = -3

Query: 498 RSPT-SNVEAQDRVLELDGDRSYITDCAQVMKKI--NFERSYFITGNFILDAYEEGCEFA 328
           RSP+ S+ EA ++ ++L  D S + D A VM+ I  +F++SYF+TG+  L+AYEE CEFA
Sbjct: 78  RSPSNSSTEASEKDIKLGKDVSGVIDRAVVMETIKEDFQKSYFVTGSLTLEAYEENCEFA 137

Query: 327 DPAASFKGLC*FTRICSNFGSLIEKSKMNLTKWEEFE 217
           DPA SFKGL  F R C+NFG LIEKS M LTKWE+FE
Sbjct: 138 DPAGSFKGLQRFKRNCTNFGLLIEKSNMKLTKWEDFE 174



 Score = 57.4 bits (137), Expect(2) = 8e-32
 Identities = 29/66 (43%), Positives = 43/66 (65%)
 Frame = -2

Query: 694 SHHFSAHRFVTF*SLHLKFYTIQCSGKKQTSSSSTNEDYESNKNVLITLAWYNFELLGIT 515
           SHH   H  +   + + K   I+C+GK+ TS+SS+++     +N L+ +AWY+ ELLGI 
Sbjct: 16  SHHH--HSIIFSPNYNGKLNRIRCNGKRPTSNSSSSKQESEPENALLKVAWYSSELLGIA 73

Query: 514 ASFFRS 497
           ASFFRS
Sbjct: 74  ASFFRS 79


>ref|XP_002277369.1| PREDICTED: uncharacterized protein LOC100258452 [Vitis vinifera]
          Length = 256

 Score =  108 bits (270), Expect(2) = 3e-31
 Identities = 56/96 (58%), Positives = 71/96 (73%), Gaps = 2/96 (2%)
 Frame = -3

Query: 498 RSPTSNVEAQDRVLELDGDRSYITDCAQVMKKI--NFERSYFITGNFILDAYEEGCEFAD 325
           RSP+S VEA +R ++L GD S   D A +++ I  +F+RSYF+TGN  L AYE+ CEFAD
Sbjct: 92  RSPSS-VEAPERAIDLAGDGSGAVDRAALVETIKEDFQRSYFVTGNLTLSAYEDDCEFAD 150

Query: 324 PAASFKGLC*FTRICSNFGSLIEKSKMNLTKWEEFE 217
           PA SF+GL  F R C+NFGSLI+KS M L KWE+FE
Sbjct: 151 PAGSFRGLRRFKRNCTNFGSLIQKSNMKLMKWEDFE 186



 Score = 53.9 bits (128), Expect(2) = 3e-31
 Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
 Frame = -2

Query: 709 AFVNISHHFS-AHRFVTF*-SLHLKFYTIQCSGKKQTSSSSTNEDYESNKNVLITLAWYN 536
           +F +++ H S  HR   F  + H K +  +C G+   S+SST ++ E  +N L+ +AWY 
Sbjct: 22  SFTSVTPHISFRHRNDFFRPNYHHKIHRFRCDGENPRSNSSTAQESEP-ENALLKVAWYG 80

Query: 535 FELLGITASFFRSITHLE 482
            ELLGI ASFFRS + +E
Sbjct: 81  SELLGIAASFFRSPSSVE 98


>emb|CBI40421.3| unnamed protein product [Vitis vinifera]
          Length = 240

 Score =  108 bits (270), Expect(2) = 3e-31
 Identities = 56/96 (58%), Positives = 71/96 (73%), Gaps = 2/96 (2%)
 Frame = -3

Query: 498 RSPTSNVEAQDRVLELDGDRSYITDCAQVMKKI--NFERSYFITGNFILDAYEEGCEFAD 325
           RSP+S VEA +R ++L GD S   D A +++ I  +F+RSYF+TGN  L AYE+ CEFAD
Sbjct: 76  RSPSS-VEAPERAIDLAGDGSGAVDRAALVETIKEDFQRSYFVTGNLTLSAYEDDCEFAD 134

Query: 324 PAASFKGLC*FTRICSNFGSLIEKSKMNLTKWEEFE 217
           PA SF+GL  F R C+NFGSLI+KS M L KWE+FE
Sbjct: 135 PAGSFRGLRRFKRNCTNFGSLIQKSNMKLMKWEDFE 170



 Score = 53.9 bits (128), Expect(2) = 3e-31
 Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
 Frame = -2

Query: 709 AFVNISHHFS-AHRFVTF*-SLHLKFYTIQCSGKKQTSSSSTNEDYESNKNVLITLAWYN 536
           +F +++ H S  HR   F  + H K +  +C G+   S+SST ++ E  +N L+ +AWY 
Sbjct: 6   SFTSVTPHISFRHRNDFFRPNYHHKIHRFRCDGENPRSNSSTAQESEP-ENALLKVAWYG 64

Query: 535 FELLGITASFFRSITHLE 482
            ELLGI ASFFRS + +E
Sbjct: 65  SELLGIAASFFRSPSSVE 82


>ref|XP_003548624.1| PREDICTED: uncharacterized protein LOC100801965 [Glycine max]
          Length = 238

 Score = 99.0 bits (245), Expect(2) = 6e-28
 Identities = 52/94 (55%), Positives = 65/94 (69%)
 Frame = -3

Query: 498 RSPTSNVEAQDRVLELDGDRSYITDCAQVMKKINFERSYFITGNFILDAYEEGCEFADPA 319
           RSP++      R+L+   DR+ + D      K +FERSYF+TG+  L+AYEE CEFADPA
Sbjct: 70  RSPSNEEVPPQRLLQTI-DRAAVVDTI----KQDFERSYFVTGDLTLNAYEEDCEFADPA 124

Query: 318 ASFKGLC*FTRICSNFGSLIEKSKMNLTKWEEFE 217
            SFKGL  F R C+NFGSL+EKS M L KWE+FE
Sbjct: 125 GSFKGLQRFKRNCTNFGSLLEKSNMKLMKWEDFE 158



 Score = 52.4 bits (124), Expect(2) = 6e-28
 Identities = 29/74 (39%), Positives = 43/74 (58%)
 Frame = -2

Query: 703 VNISHHFSAHRFVTF*SLHLKFYTIQCSGKKQTSSSSTNEDYESNKNVLITLAWYNFELL 524
           +NISHH +          HL+ +  +CSG      ++ N++ ES  N ++ LAWY+ ELL
Sbjct: 9   INISHHSTLIFPPKQHKQHLRIHRFRCSG------TNPNKESESQNNAILKLAWYSSELL 62

Query: 523 GITASFFRSITHLE 482
           GI AS FRS ++ E
Sbjct: 63  GIAASVFRSPSNEE 76


>ref|XP_002511911.1| conserved hypothetical protein [Ricinus communis]
           gi|223549091|gb|EEF50580.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 235

 Score = 95.5 bits (236), Expect(2) = 1e-24
 Identities = 53/96 (55%), Positives = 63/96 (65%), Gaps = 2/96 (2%)
 Frame = -3

Query: 498 RSPTSNVEAQDRVLELDGDRSYITDCAQVMKKI--NFERSYFITGNFILDAYEEGCEFAD 325
           RSP+   EA     +L  D     D A V++ I  +F+RSYF+TGN   DAYEE CEFAD
Sbjct: 72  RSPSVTSEAN---FKLSIDDLGSIDRATVVQSIKDDFQRSYFVTGNLTSDAYEEDCEFAD 128

Query: 324 PAASFKGLC*FTRICSNFGSLIEKSKMNLTKWEEFE 217
           PA SFKGL  F R C+NFG L+EKS M L KWE+FE
Sbjct: 129 PAGSFKGLRRFKRNCTNFGLLLEKSNMKLMKWEDFE 164



 Score = 44.7 bits (104), Expect(2) = 1e-24
 Identities = 27/63 (42%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
 Frame = -2

Query: 682 SAHRFVTF*SLH-LKFYTIQCSGKKQTSSSSTNEDYESNKNVLITLAWYNFELLGITASF 506
           S H+ + F  ++  KF  I+C+G+    + ST ++ E  +N L+ +AWY+ ELLGI ASF
Sbjct: 16  SDHQNIIFSPIYPRKFNRIRCNGE----NPSTRKESEP-ENALLKVAWYSSELLGIAASF 70

Query: 505 FRS 497
           FRS
Sbjct: 71  FRS 73


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