BLASTX nr result

ID: Coptis21_contig00013070 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013070
         (1352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281134.1| PREDICTED: mitochondrial substrate carrier f...   461   e-127
ref|XP_002512372.1| peroxisomal membrane protein pmp34, putative...   455   e-125
emb|CAN77030.1| hypothetical protein VITISV_015341 [Vitis vinifera]   449   e-124
ref|XP_002314718.1| predicted protein [Populus trichocarpa] gi|2...   449   e-124
ref|XP_002328561.1| predicted protein [Populus trichocarpa] gi|2...   448   e-123

>ref|XP_002281134.1| PREDICTED: mitochondrial substrate carrier family protein Q [Vitis
            vinifera] gi|297737006|emb|CBI26207.3| unnamed protein
            product [Vitis vinifera]
          Length = 319

 Score =  461 bits (1187), Expect = e-127
 Identities = 242/318 (76%), Positives = 273/318 (85%), Gaps = 2/318 (0%)
 Frame = -3

Query: 1242 DLESLTEATSGAIGALLSTSILYPLDTCKTKYQAEVRDHAQQKYRRLSDVLWEAISTGQV 1063
            D ESL EATSGA+GAL+ST+ILYPLDTCKTKYQAEV  H QQKYR +SDVLWEAIST QV
Sbjct: 4    DTESLLEATSGAVGALVSTTILYPLDTCKTKYQAEVSGHHQQKYRNISDVLWEAISTNQV 63

Query: 1062 LSLYQGLGTKNLQSFISQFVYFYGYSYFKRLYLERSGTKSIGTRXXXXXXXXXXXXXXLV 883
            LSLYQGLGTKNLQSFISQFVYFYGYS+FKRLYLE+SG K+I T+              L+
Sbjct: 64   LSLYQGLGTKNLQSFISQFVYFYGYSFFKRLYLEKSGAKTIRTKANLIVAAAAGACTVLM 123

Query: 882  TQPLELASSRMQTSAFGKSKGLYETLTEGTWIEAFDGLGISLLLTSNPAIQYTVFDQLKS 703
            TQPL+ ASSRMQTSAFGKSKGL++TL+EGTW EAFDGLGISLLLT+NP+IQYTVFDQLK 
Sbjct: 124  TQPLDTASSRMQTSAFGKSKGLWKTLSEGTWKEAFDGLGISLLLTANPSIQYTVFDQLKL 183

Query: 702  RLLMRQRSSKADTESSPEALSAFSAFVLGAISKSIATCLTYPAIRCKVMIQAADVSEDG- 526
            RLL  + S+K  TESSPEALSAFSAFVLGA+SK IAT +TYPAIRCKVM+QAA+  EDG 
Sbjct: 184  RLLKGKLSNKTGTESSPEALSAFSAFVLGAVSKCIATTVTYPAIRCKVMLQAAESDEDGT 243

Query: 525  -KDAQPKQSKTISGTLYSIWKREGLPGFFKGLHAQILKTVLSSALLLMIKEKITKTTWVL 349
             K+AQP+  KT+S T+YSIWKREGL GFFKGL AQILKTVLSSALLLMIKEKITKTTWV+
Sbjct: 244  TKEAQPR--KTVSDTIYSIWKREGLLGFFKGLEAQILKTVLSSALLLMIKEKITKTTWVI 301

Query: 348  MLALQRSLLVTRSRLKSS 295
            +LAL+R L V R+RLK++
Sbjct: 302  LLALRRYLTVNRTRLKAA 319


>ref|XP_002512372.1| peroxisomal membrane protein pmp34, putative [Ricinus communis]
            gi|223548333|gb|EEF49824.1| peroxisomal membrane protein
            pmp34, putative [Ricinus communis]
          Length = 318

 Score =  455 bits (1171), Expect = e-125
 Identities = 237/317 (74%), Positives = 271/317 (85%)
 Frame = -3

Query: 1245 MDLESLTEATSGAIGALLSTSILYPLDTCKTKYQAEVRDHAQQKYRRLSDVLWEAISTGQ 1066
            +DLESL+EATSGAIG+LLST+ILYPLDTCKTKYQAEVR H Q+KYR LSDVL+EAIS GQ
Sbjct: 3    VDLESLSEATSGAIGSLLSTTILYPLDTCKTKYQAEVRAHGQRKYRHLSDVLFEAISNGQ 62

Query: 1065 VLSLYQGLGTKNLQSFISQFVYFYGYSYFKRLYLERSGTKSIGTRXXXXXXXXXXXXXXL 886
            +LSLYQGLGTKNLQSFISQFVYFYGYSYFKRLYLE+SG K IGT+              +
Sbjct: 63   ILSLYQGLGTKNLQSFISQFVYFYGYSYFKRLYLEKSGFKKIGTKANLVLAAAAGACTAI 122

Query: 885  VTQPLELASSRMQTSAFGKSKGLYETLTEGTWIEAFDGLGISLLLTSNPAIQYTVFDQLK 706
            VTQPL+ ASSRMQTSAFGKSKGL++TLTEG W +AFDGLGISLLLTSNPAIQYTVFDQLK
Sbjct: 123  VTQPLDTASSRMQTSAFGKSKGLWQTLTEGNWGDAFDGLGISLLLTSNPAIQYTVFDQLK 182

Query: 705  SRLLMRQRSSKADTESSPEALSAFSAFVLGAISKSIATCLTYPAIRCKVMIQAADVSEDG 526
             RLL + + + AD+ SS EALSAFSAFVLGA+SKSIAT +TYPAIRCKVMIQAAD  ++ 
Sbjct: 183  QRLL-KGKQNTADSSSSVEALSAFSAFVLGAVSKSIATVITYPAIRCKVMIQAADSDDES 241

Query: 525  KDAQPKQSKTISGTLYSIWKREGLPGFFKGLHAQILKTVLSSALLLMIKEKITKTTWVLM 346
            K  + K  KT+ G + +IWKREG+ GFFKGL AQILKTVLSSALLLMIKEKI+++TWVL+
Sbjct: 242  KKGKSKSRKTVPGVVCAIWKREGVLGFFKGLQAQILKTVLSSALLLMIKEKISRSTWVLI 301

Query: 345  LALQRSLLVTRSRLKSS 295
            LA++R LLV RSRLKS+
Sbjct: 302  LAIRRYLLVPRSRLKSA 318


>emb|CAN77030.1| hypothetical protein VITISV_015341 [Vitis vinifera]
          Length = 322

 Score =  449 bits (1156), Expect = e-124
 Identities = 238/318 (74%), Positives = 266/318 (83%), Gaps = 1/318 (0%)
 Frame = -3

Query: 1245 MDLESLTEATSGAIGALLSTSILYPLDTCKTKYQAEVRDHAQQKYRRLSDVLWEAISTGQ 1066
            +DL+SL+EATSGA+GALLST+ILYPLDTCKTKYQAEV+ H QQKYR LSDVLWEAIST Q
Sbjct: 3    VDLQSLSEATSGAVGALLSTTILYPLDTCKTKYQAEVKAHGQQKYRNLSDVLWEAISTRQ 62

Query: 1065 VLSLYQGLGTKNLQSFISQFVYFYGYSYFKRLYLERSGTKSIGTRXXXXXXXXXXXXXXL 886
            ++SLYQGLGTKNLQSFI+QFVYFYGYS FKRLYLERSG  SIGT+              +
Sbjct: 63   IVSLYQGLGTKNLQSFIAQFVYFYGYSCFKRLYLERSGFNSIGTKANLILAAAAGACTAI 122

Query: 885  VTQPLELASSRMQTSAFGKSKGLYETLTEGTWIEAFDGLGISLLLTSNPAIQYTVFDQLK 706
            VTQPL+ ASSRMQTSAFGKSKGL++TLT GTW EAFDGLGISLLLT+NPAIQYTVFDQLK
Sbjct: 123  VTQPLDTASSRMQTSAFGKSKGLWQTLTAGTWSEAFDGLGISLLLTTNPAIQYTVFDQLK 182

Query: 705  SRLLMRQRSSKADTESSPEALSAFSAFVLGAISKSIATCLTYPAIRCKVMIQAADVSED- 529
             R L R ++   +  SSPEALSA SAF+LGAISKSIAT LTYPAIRCKVMIQAAD S+D 
Sbjct: 183  QRHLKRNQNI-TEKGSSPEALSALSAFMLGAISKSIATFLTYPAIRCKVMIQAADTSDDE 241

Query: 528  GKDAQPKQSKTISGTLYSIWKREGLPGFFKGLHAQILKTVLSSALLLMIKEKITKTTWVL 349
             K A  K  KT+ G LY+IWKREG+PGFFKGL AQILKTVLSSALLLMIKEKI   TWVL
Sbjct: 242  AKKAPQKSHKTVHGVLYAIWKREGVPGFFKGLQAQILKTVLSSALLLMIKEKIAAGTWVL 301

Query: 348  MLALQRSLLVTRSRLKSS 295
            +LA ++ LL+T SRLKS+
Sbjct: 302  ILAARKYLLLTGSRLKSA 319


>ref|XP_002314718.1| predicted protein [Populus trichocarpa] gi|222863758|gb|EEF00889.1|
            predicted protein [Populus trichocarpa]
          Length = 322

 Score =  449 bits (1155), Expect = e-124
 Identities = 234/316 (74%), Positives = 264/316 (83%)
 Frame = -3

Query: 1242 DLESLTEATSGAIGALLSTSILYPLDTCKTKYQAEVRDHAQQKYRRLSDVLWEAISTGQV 1063
            DLESL+EATSGAIGAL+ST+I YPLDTCKTKYQAEVR H QQKYR +SDV WEAI++ QV
Sbjct: 4    DLESLSEATSGAIGALVSTTISYPLDTCKTKYQAEVRAHHQQKYRNISDVFWEAIASRQV 63

Query: 1062 LSLYQGLGTKNLQSFISQFVYFYGYSYFKRLYLERSGTKSIGTRXXXXXXXXXXXXXXLV 883
            LSLYQGLGTKNLQSFISQFVYFYGYS+FKRLYLE+S  K+IGT+              +V
Sbjct: 64   LSLYQGLGTKNLQSFISQFVYFYGYSFFKRLYLEKSRNKTIGTKANLIVAAAAGACTVIV 123

Query: 882  TQPLELASSRMQTSAFGKSKGLYETLTEGTWIEAFDGLGISLLLTSNPAIQYTVFDQLKS 703
            TQPL+ ASS+MQTS FGKS+GL++TL+EGTW EAFDGLGISLLLTSNP+IQYTVFDQLK 
Sbjct: 124  TQPLDTASSKMQTSEFGKSRGLWKTLSEGTWSEAFDGLGISLLLTSNPSIQYTVFDQLKR 183

Query: 702  RLLMRQRSSKADTESSPEALSAFSAFVLGAISKSIATCLTYPAIRCKVMIQAADVSEDGK 523
            RLL RQ S K+  ESSPEALSAFSAFVLGA+SK IATC+TYPAIRCKV +QAA+  E   
Sbjct: 184  RLLERQLSKKSSIESSPEALSAFSAFVLGAVSKCIATCVTYPAIRCKVTLQAAESDESEI 243

Query: 522  DAQPKQSKTISGTLYSIWKREGLPGFFKGLHAQILKTVLSSALLLMIKEKITKTTWVLML 343
            +    ++KTISG LYSIWK EG  GFFKGL AQ LKTVLSSAL LMIKEKI+KTTW LML
Sbjct: 244  EEVQAKTKTISGALYSIWKNEGSAGFFKGLLAQNLKTVLSSALHLMIKEKISKTTWFLML 303

Query: 342  ALQRSLLVTRSRLKSS 295
            AL+R L VTRSR+KS+
Sbjct: 304  ALKRYLFVTRSRIKST 319


>ref|XP_002328561.1| predicted protein [Populus trichocarpa] gi|222838276|gb|EEE76641.1|
            predicted protein [Populus trichocarpa]
          Length = 317

 Score =  448 bits (1153), Expect = e-123
 Identities = 234/318 (73%), Positives = 267/318 (83%), Gaps = 1/318 (0%)
 Frame = -3

Query: 1245 MDLESLTEATSGAIGALLSTSILYPLDTCKTKYQAEVRDHAQQKYRRLSDVLWEAISTGQ 1066
            +DLES++EATSGAIG+LLST+ILYPLDTCKTKYQAE R H QQKYR+L+DVLWEAIST Q
Sbjct: 3    VDLESVSEATSGAIGSLLSTTILYPLDTCKTKYQAEARAHGQQKYRKLTDVLWEAISTRQ 62

Query: 1065 VLSLYQGLGTKNLQSFISQFVYFYGYSYFKRLYLERSGTKSIGTRXXXXXXXXXXXXXXL 886
            VLSLYQG+GTKNLQSFISQFVYFYGYSYFKRLY+E+SG K IGT+              +
Sbjct: 63   VLSLYQGIGTKNLQSFISQFVYFYGYSYFKRLYMEKSGFKKIGTKANLIIAAAAGACTAV 122

Query: 885  VTQPLELASSRMQTSAFGKSKGLYETLTEGTWIEAFDGLGISLLLTSNPAIQYTVFDQLK 706
            +TQPL+ ASSRMQTSAFGKSKGL+ETLTEG+W +AFDGLGISLLLTSNPAIQYTVFDQLK
Sbjct: 123  ITQPLDTASSRMQTSAFGKSKGLWETLTEGSWSDAFDGLGISLLLTSNPAIQYTVFDQLK 182

Query: 705  SRLLMRQRSSKADTESSPEALSAFSAFVLGAISKSIATCLTYPAIRCKVMIQAADVSED- 529
             +LLMR   +K   E +   LSAFSAFVLGA+SKSIAT LTYPAIRCKV+I+AAD  +D 
Sbjct: 183  QKLLMR---NKNGAEKTAVTLSAFSAFVLGALSKSIATFLTYPAIRCKVVIEAADTDDDE 239

Query: 528  GKDAQPKQSKTISGTLYSIWKREGLPGFFKGLHAQILKTVLSSALLLMIKEKITKTTWVL 349
             K +Q K  KTIS  + +IWKREG+ GFFKGLHAQILKTVLSSALLLMIKEKI  TTWVL
Sbjct: 240  TKKSQRKSKKTISAVICAIWKREGIFGFFKGLHAQILKTVLSSALLLMIKEKIAATTWVL 299

Query: 348  MLALQRSLLVTRSRLKSS 295
            +LA++R L +TR RLKS+
Sbjct: 300  ILAIRRYLFLTRGRLKST 317


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