BLASTX nr result
ID: Coptis21_contig00013068
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00013068 (467 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002522208.1| hypothetical protein RCOM_1732210 [Ricinus c... 63 2e-08 ref|XP_004146631.1| PREDICTED: putative ribonuclease H protein A... 59 3e-07 gb|AEJ07916.1| putative ZmL1 non-LTR retrotransposon protein [Ze... 59 3e-07 gb|AFW65836.1| hypothetical protein ZEAMMB73_825751 [Zea mays] 59 5e-07 ref|XP_002869889.1| At4g21420 [Arabidopsis lyrata subsp. lyrata]... 58 7e-07 >ref|XP_002522208.1| hypothetical protein RCOM_1732210 [Ricinus communis] gi|223538579|gb|EEF40183.1| hypothetical protein RCOM_1732210 [Ricinus communis] Length = 95 Score = 63.2 bits (152), Expect = 2e-08 Identities = 33/86 (38%), Positives = 47/86 (54%) Frame = +1 Query: 208 PQLLECYWFLPPMGIMKISTDGASRGNPGIAGWGVVARNHLGVVCAAGIGGLGVETSYMA 387 P++ W PP +K++++GA+RG PG G G + RN GVV I L +++A Sbjct: 2 PKIFTIKWHPPPPSWIKLNSNGATRGAPGTTGVGGLFRNCRGVVKGCFIVPLSTTYAFVA 61 Query: 388 ECHDIIEGTRRAVEQGWKDIWIESDS 465 E I G +A GW IW+ESDS Sbjct: 62 EIKAAIYGIDKAYNFGWNKIWLESDS 87 >ref|XP_004146631.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis sativus] gi|449488498|ref|XP_004158057.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis sativus] Length = 205 Score = 59.3 bits (142), Expect = 3e-07 Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 2/92 (2%) Frame = +1 Query: 196 LSRAPQLLECYWFLPPMGIMKISTDGASRGN--PGIAGWGVVARNHLGVVCAAGIGGLGV 369 L + P + W P G K++ DG+S+G PG+A G V R+H +G Sbjct: 25 LHKRPIPIPVAWTRPEFGWTKLNFDGSSKGEIGPGVASIGGVLRDHKAQFLLGYAESIGR 84 Query: 370 ETSYMAECHDIIEGTRRAVEQGWKDIWIESDS 465 S MAE + +G +E GWKD+W+E D+ Sbjct: 85 AYSSMAELKALTKGLELVLENGWKDVWVEGDA 116 >gb|AEJ07916.1| putative ZmL1 non-LTR retrotransposon protein [Zea mays] Length = 472 Score = 59.3 bits (142), Expect = 3e-07 Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 5/108 (4%) Frame = +1 Query: 157 DTILLLKLNLEP----RLSRAPQLLECYWFLPPMGIMKISTDGASRGNPGIAGWGVVARN 324 +T+ +N+E + +RAP + W PP G KI+ DG+ R G+ WG + R Sbjct: 280 NTVAYHLMNMEKLQIGKSARAPPM-NLKWQPPPAGFYKINCDGSYRAKSGLGSWGCIIRG 338 Query: 325 HLGVVCAAGIGGL-GVETSYMAECHDIIEGTRRAVEQGWKDIWIESDS 465 H G AAG G L G+ ++ AE ++G AV G +++ IE+D+ Sbjct: 339 HDGGFLAAGAGALTGISSALHAESVACMKGLELAVFLGMQNVMIETDA 386 >gb|AFW65836.1| hypothetical protein ZEAMMB73_825751 [Zea mays] Length = 279 Score = 58.5 bits (140), Expect = 5e-07 Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 5/108 (4%) Frame = +1 Query: 157 DTILLLKLNLEP----RLSRAPQLLECYWFLPPMGIMKISTDGASRGNPGIAGWGVVARN 324 +T+ +N+E + +RAP + W PP G KI+ DG+ G+ GWG + R Sbjct: 87 NTVAYHLMNMEKLQIGKSARAPPM-NLKWQPPPAGFYKINCDGSYLAKSGLGGWGCIIRG 145 Query: 325 HLGVVCAAGIGGL-GVETSYMAECHDIIEGTRRAVEQGWKDIWIESDS 465 H G AAG G L G+ ++ AE ++G AV G +++ IE+D+ Sbjct: 146 HDGSFLAAGAGTLTGISSTLHAESVACMKGLELAVFLGMQNVMIETDA 193 >ref|XP_002869889.1| At4g21420 [Arabidopsis lyrata subsp. lyrata] gi|297315725|gb|EFH46148.1| At4g21420 [Arabidopsis lyrata subsp. lyrata] Length = 201 Score = 58.2 bits (139), Expect = 7e-07 Identities = 36/110 (32%), Positives = 55/110 (50%) Frame = +1 Query: 136 KGTMSSSDTILLLKLNLEPRLSRAPQLLECYWFLPPMGIMKISTDGASRGNPGIAGWGVV 315 +G++ S T+LL++ + Q ++ W P +G +K++ DG SRG G A G + Sbjct: 11 QGSLQSRATLLLIR-------NYHKQPVKVVWKKPQIGWIKLNFDG-SRGREGQASIGGI 62 Query: 316 ARNHLGVVCAAGIGGLGVETSYMAECHDIIEGTRRAVEQGWKDIWIESDS 465 RNH +G TS MAE + G +E GW DIW+E D+ Sbjct: 63 FRNHKAEFLLGYSESIGEATSTMAEFAALKRGLELVLENGWTDIWLEGDA 112