BLASTX nr result

ID: Coptis21_contig00013060 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013060
         (753 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321118.1| predicted protein [Populus trichocarpa] gi|2...   161   1e-37
ref|NP_001132031.1| uncharacterized protein LOC100193440 [Zea ma...   161   1e-37
ref|XP_002452409.1| hypothetical protein SORBIDRAFT_04g025220 [S...   159   6e-37
ref|XP_002531025.1| Vesicle transport protein GOT1B, putative [R...   159   8e-37
ref|NP_001047360.1| Os02g0602800 [Oryza sativa Japonica Group] g...   158   1e-36

>ref|XP_002321118.1| predicted protein [Populus trichocarpa] gi|222861891|gb|EEE99433.1|
           predicted protein [Populus trichocarpa]
          Length = 135

 Score =  161 bits (408), Expect = 1e-37
 Identities = 76/99 (76%), Positives = 84/99 (84%)
 Frame = -2

Query: 752 GLIALGNILSLSGVALLLGWRSTWQLFTKRVNYKGSVPFLLGLFLIFVRWPIVGIIMEIY 573
           GL+ALGNI  LSGVA+LLGWRSTW+LFT R NYKGSV FLLGLF IFVRWP+VGII EIY
Sbjct: 34  GLLALGNIFWLSGVAILLGWRSTWKLFTNRENYKGSVCFLLGLFFIFVRWPVVGIIFEIY 93

Query: 572 GSIILFSGFSPSIKVFLYQIPIVGWILQYPFLLLDQLRK 456
             I LF GF PS+KVFLYQIP+VGWI+QYP  LLD LR+
Sbjct: 94  SCIALFGGFWPSVKVFLYQIPVVGWIIQYPITLLDYLRR 132


>ref|NP_001132031.1| uncharacterized protein LOC100193440 [Zea mays]
           gi|194693248|gb|ACF80708.1| unknown [Zea mays]
           gi|195623924|gb|ACG33792.1| golgi transport 1 protein B
           [Zea mays] gi|413922933|gb|AFW62865.1| golgi transport 1
           protein B isoform 1 [Zea mays]
           gi|413922934|gb|AFW62866.1| golgi transport 1 protein B
           isoform 2 [Zea mays]
          Length = 135

 Score =  161 bits (408), Expect = 1e-37
 Identities = 72/99 (72%), Positives = 85/99 (85%)
 Frame = -2

Query: 752 GLIALGNILSLSGVALLLGWRSTWQLFTKRVNYKGSVPFLLGLFLIFVRWPIVGIIMEIY 573
           GL+ALGNI  L+GV LLLGW+S WQLFTK+ N KGSVPF +GLFL+FVRWP+ GIIME+Y
Sbjct: 34  GLLALGNIFFLTGVGLLLGWQSMWQLFTKKANLKGSVPFFIGLFLLFVRWPVAGIIMELY 93

Query: 572 GSIILFSGFSPSIKVFLYQIPIVGWILQYPFLLLDQLRK 456
           GS +LFSG+ P I+ FLYQIPI+GWILQYPF LL QLR+
Sbjct: 94  GSFVLFSGYGPPIQAFLYQIPIIGWILQYPFQLLGQLRR 132


>ref|XP_002452409.1| hypothetical protein SORBIDRAFT_04g025220 [Sorghum bicolor]
           gi|241932240|gb|EES05385.1| hypothetical protein
           SORBIDRAFT_04g025220 [Sorghum bicolor]
          Length = 135

 Score =  159 bits (402), Expect = 6e-37
 Identities = 71/99 (71%), Positives = 83/99 (83%)
 Frame = -2

Query: 752 GLIALGNILSLSGVALLLGWRSTWQLFTKRVNYKGSVPFLLGLFLIFVRWPIVGIIMEIY 573
           GL+ALGNI  L+GV LLLGW+S WQLFTK+ N KGSVPF  GLFL+FVRWP+ GIIME+Y
Sbjct: 34  GLLALGNIFFLTGVGLLLGWQSMWQLFTKKANLKGSVPFFFGLFLLFVRWPVAGIIMELY 93

Query: 572 GSIILFSGFSPSIKVFLYQIPIVGWILQYPFLLLDQLRK 456
           GS +LFSG+ P I+ FLYQIPI+GWILQYPF L  QLR+
Sbjct: 94  GSFVLFSGYGPPIQAFLYQIPIIGWILQYPFQLFGQLRR 132


>ref|XP_002531025.1| Vesicle transport protein GOT1B, putative [Ricinus communis]
           gi|223529400|gb|EEF31363.1| Vesicle transport protein
           GOT1B, putative [Ricinus communis]
          Length = 135

 Score =  159 bits (401), Expect = 8e-37
 Identities = 72/98 (73%), Positives = 84/98 (85%)
 Frame = -2

Query: 752 GLIALGNILSLSGVALLLGWRSTWQLFTKRVNYKGSVPFLLGLFLIFVRWPIVGIIMEIY 573
           GL+ALGNI  L+GVA+LLGW STW LFT R NYKG++ FLLGLF IFVRWPIVGI++EIY
Sbjct: 34  GLLALGNIFWLTGVAILLGWHSTWNLFTNRANYKGTISFLLGLFFIFVRWPIVGIVLEIY 93

Query: 572 GSIILFSGFSPSIKVFLYQIPIVGWILQYPFLLLDQLR 459
           G I LF GF P++KVFLYQIP+VGWI+QYP LLL +LR
Sbjct: 94  GCIALFGGFWPTVKVFLYQIPVVGWIIQYPVLLLGRLR 131


>ref|NP_001047360.1| Os02g0602800 [Oryza sativa Japonica Group]
           gi|47497305|dbj|BAD19347.1| NFkB activating protein-like
           [Oryza sativa Japonica Group]
           gi|113536891|dbj|BAF09274.1| Os02g0602800 [Oryza sativa
           Japonica Group] gi|215695569|dbj|BAG90760.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 135

 Score =  158 bits (400), Expect = 1e-36
 Identities = 69/99 (69%), Positives = 83/99 (83%)
 Frame = -2

Query: 752 GLIALGNILSLSGVALLLGWRSTWQLFTKRVNYKGSVPFLLGLFLIFVRWPIVGIIMEIY 573
           GL+ALGNI  L+G+ LLLGW+S WQLFTK+ N KGSVPF LGLFL+FVRWP+ GIIME+Y
Sbjct: 34  GLLALGNIFFLTGIGLLLGWQSMWQLFTKKANIKGSVPFFLGLFLLFVRWPVAGIIMELY 93

Query: 572 GSIILFSGFSPSIKVFLYQIPIVGWILQYPFLLLDQLRK 456
           GS +LFSG+ P I+ FLYQIP++GWILQYPF L  Q R+
Sbjct: 94  GSFVLFSGYGPPIQAFLYQIPVIGWILQYPFQLFGQFRR 132


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