BLASTX nr result

ID: Coptis21_contig00013049 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013049
         (809 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278790.1| PREDICTED: UPF0406 protein C16orf57 homolog ...   301   1e-79
ref|XP_002322318.1| predicted protein [Populus trichocarpa] gi|2...   283   2e-74
ref|XP_002511033.1| conserved hypothetical protein [Ricinus comm...   283   3e-74
ref|XP_003516818.1| PREDICTED: UPF0406 protein C16orf57-like iso...   275   7e-72
gb|ACU24462.1| unknown [Glycine max]                                  273   2e-71

>ref|XP_002278790.1| PREDICTED: UPF0406 protein C16orf57 homolog [Vitis vinifera]
           gi|147791224|emb|CAN70131.1| hypothetical protein
           VITISV_030399 [Vitis vinifera]
           gi|297737378|emb|CBI26579.3| unnamed protein product
           [Vitis vinifera]
          Length = 283

 Score =  301 bits (771), Expect = 1e-79
 Identities = 151/223 (67%), Positives = 177/223 (79%)
 Frame = -1

Query: 797 RVRSFPHVDGNYALHVSIPVHIPSTARKELAPLLKRIAXXXXXXXXXXXXXXXXXLCKDD 618
           RVRSFPHV+GNYALHV IPV+IPS+ +KEL   LK++                  LCKDD
Sbjct: 62  RVRSFPHVEGNYALHVFIPVYIPSSPKKELVQYLKKVMSLVPGLHVVDVDIPLNILCKDD 121

Query: 617 QKLEQVGLGREFHISLGRTVPIRVHQIESILTMLRQKLLSQKRYWIDFSKLEVFVNDDQT 438
            KLEQV LGREFHISLGRTVPIRVHQI+SI+TMLRQKL  Q+RYWIDF+K EVFVNDDQT
Sbjct: 122 NKLEQVALGREFHISLGRTVPIRVHQIDSIVTMLRQKLQFQRRYWIDFNKWEVFVNDDQT 181

Query: 437 RTFLSLEVISRGLAEITKQIQAVNEIYRLHNLPEFYKDPRPHISVAWTMGDRSSLVKRKT 258
           R+FLS+EVI+ GLAEIT+QIQAVNE+YRLHNLPEFY+DPRPHIS+ W +G+ S  +KR  
Sbjct: 182 RSFLSVEVIAGGLAEITRQIQAVNEVYRLHNLPEFYEDPRPHISLVWALGNISDSLKRAV 241

Query: 257 KQEIQRYCNNGGSVQKLGFTSKFRGIECKIGSKVYTICKCSEE 129
            +E++R+ N GGSVQK  FT KF GIECKIG+K Y ICK SE+
Sbjct: 242 -EEMRRHINVGGSVQKRIFTCKFNGIECKIGNKTYKICKFSED 283


>ref|XP_002322318.1| predicted protein [Populus trichocarpa] gi|222869314|gb|EEF06445.1|
           predicted protein [Populus trichocarpa]
          Length = 290

 Score =  283 bits (725), Expect = 2e-74
 Identities = 142/227 (62%), Positives = 170/227 (74%)
 Frame = -1

Query: 809 GTGSRVRSFPHVDGNYALHVSIPVHIPSTARKELAPLLKRIAXXXXXXXXXXXXXXXXXL 630
           G  SR+RSFPHV GNYALHV IPV+IP   +KE+   L RI+                 L
Sbjct: 64  GQSSRIRSFPHVQGNYALHVYIPVNIPPALKKEVVQFLNRISLVVPGLHVVDADVPLDIL 123

Query: 629 CKDDQKLEQVGLGREFHISLGRTVPIRVHQIESILTMLRQKLLSQKRYWIDFSKLEVFVN 450
           CKDD KLEQV LGR+FHISLGRTVPIRVHQI+S++ MLRQKL  QK YWIDF+K EVFVN
Sbjct: 124 CKDDHKLEQVALGRDFHISLGRTVPIRVHQIDSVVAMLRQKLQFQKGYWIDFNKWEVFVN 183

Query: 449 DDQTRTFLSLEVISRGLAEITKQIQAVNEIYRLHNLPEFYKDPRPHISVAWTMGDRSSLV 270
           DD+TRTFLSLEV++ GLAEITKQIQ+VN++Y+LHNLPEFYKDPRPHIS+AW +GD S ++
Sbjct: 184 DDKTRTFLSLEVVTGGLAEITKQIQSVNDVYKLHNLPEFYKDPRPHISLAWALGDVSDVL 243

Query: 269 KRKTKQEIQRYCNNGGSVQKLGFTSKFRGIECKIGSKVYTICKCSEE 129
           KR+   E++R  + GGS+ K  F+ KF GIEC IG K Y I K  +E
Sbjct: 244 KREVVNEMKR-SSAGGSILKRVFSCKFSGIECHIGKKTYKISKFLDE 289


>ref|XP_002511033.1| conserved hypothetical protein [Ricinus communis]
           gi|223550148|gb|EEF51635.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 288

 Score =  283 bits (724), Expect = 3e-74
 Identities = 141/227 (62%), Positives = 174/227 (76%)
 Frame = -1

Query: 809 GTGSRVRSFPHVDGNYALHVSIPVHIPSTARKELAPLLKRIAXXXXXXXXXXXXXXXXXL 630
           G  SR+RSF HV+GNYALHV IPV+IP  ++KE+   LK+I+                 L
Sbjct: 62  GQPSRMRSFAHVEGNYALHVYIPVYIPPASKKEILSFLKKISSLVPGLHVVDVDIPLDIL 121

Query: 629 CKDDQKLEQVGLGREFHISLGRTVPIRVHQIESILTMLRQKLLSQKRYWIDFSKLEVFVN 450
           CKDDQKLE V LGREFHISLGRTVPIRVHQI+S+++MLRQ+L  + RYWIDFSK EVFVN
Sbjct: 122 CKDDQKLEHVALGREFHISLGRTVPIRVHQIDSVVSMLRQRLQFKNRYWIDFSKWEVFVN 181

Query: 449 DDQTRTFLSLEVISRGLAEITKQIQAVNEIYRLHNLPEFYKDPRPHISVAWTMGDRSSLV 270
           DD+TR+FLSLEV++ GLAEITKQI++VN++Y+LHNLPEFYKDPRPHIS+AW +GD S  +
Sbjct: 182 DDKTRSFLSLEVVNGGLAEITKQIESVNQVYKLHNLPEFYKDPRPHISLAWALGDISDSL 241

Query: 269 KRKTKQEIQRYCNNGGSVQKLGFTSKFRGIECKIGSKVYTICKCSEE 129
           KR  ++EI++  +  G VQK  FT K RGIECKIG+K Y  CK  +E
Sbjct: 242 KRVVEEEIKK-SSIAGLVQKRIFTCKCRGIECKIGNKTYNFCKFLDE 287


>ref|XP_003516818.1| PREDICTED: UPF0406 protein C16orf57-like isoform 1 [Glycine max]
           gi|356495921|ref|XP_003516819.1| PREDICTED: UPF0406
           protein C16orf57-like isoform 2 [Glycine max]
          Length = 279

 Score =  275 bits (704), Expect = 7e-72
 Identities = 137/226 (60%), Positives = 170/226 (75%)
 Frame = -1

Query: 809 GTGSRVRSFPHVDGNYALHVSIPVHIPSTARKELAPLLKRIAXXXXXXXXXXXXXXXXXL 630
           G  +R+RSFPHVDGNYALHV IP++I S ++KEL   LK+I+                 L
Sbjct: 54  GQTTRLRSFPHVDGNYALHVYIPIYISSPSKKELVAFLKKISSREPRLNVVDVDVPLNIL 113

Query: 629 CKDDQKLEQVGLGREFHISLGRTVPIRVHQIESILTMLRQKLLSQKRYWIDFSKLEVFVN 450
           C++D+KLEQV LGREFHISLGRTVPIRVHQI+S+++MLRQKL  Q +YWIDF+K EVFVN
Sbjct: 114 CQNDEKLEQVTLGREFHISLGRTVPIRVHQIDSVVSMLRQKLQIQHQYWIDFNKWEVFVN 173

Query: 449 DDQTRTFLSLEVISRGLAEITKQIQAVNEIYRLHNLPEFYKDPRPHISVAWTMGDRSSLV 270
           DD TR+FLS EV+  GL EITKQI+ VN IYRLHNLPEFYKDPRPHIS+AW +GD +  +
Sbjct: 174 DDHTRSFLSAEVVQGGLVEITKQIEVVNAIYRLHNLPEFYKDPRPHISLAWALGDIAHSL 233

Query: 269 KRKTKQEIQRYCNNGGSVQKLGFTSKFRGIECKIGSKVYTICKCSE 132
           K+   +E++  C  G S++K  F+ KF+ IECKIG K YTICK S+
Sbjct: 234 KKIVDEEMK--CAVGKSLKKCIFSCKFKSIECKIGKKAYTICKISD 277


>gb|ACU24462.1| unknown [Glycine max]
          Length = 279

 Score =  273 bits (699), Expect = 2e-71
 Identities = 136/223 (60%), Positives = 168/223 (75%)
 Frame = -1

Query: 809 GTGSRVRSFPHVDGNYALHVSIPVHIPSTARKELAPLLKRIAXXXXXXXXXXXXXXXXXL 630
           G  +R+RSFPHVDGNYALHV IP++I S ++KEL   LK+I+                 L
Sbjct: 54  GQTTRLRSFPHVDGNYALHVYIPIYISSPSKKELVAFLKKISSREPRLNVVDVDVPLNIL 113

Query: 629 CKDDQKLEQVGLGREFHISLGRTVPIRVHQIESILTMLRQKLLSQKRYWIDFSKLEVFVN 450
           C++D+KLEQV LGREFHISLGRTVPIRVHQI+S+++MLRQKL  Q +YWIDF+K EVFVN
Sbjct: 114 CQNDEKLEQVTLGREFHISLGRTVPIRVHQIDSVVSMLRQKLQIQHQYWIDFNKWEVFVN 173

Query: 449 DDQTRTFLSLEVISRGLAEITKQIQAVNEIYRLHNLPEFYKDPRPHISVAWTMGDRSSLV 270
           DD TR+FLS EV+  GL EITKQI+ VN IYRLHNLPEFYKDPRPHIS+AW +GD +  +
Sbjct: 174 DDHTRSFLSAEVVQGGLVEITKQIEVVNAIYRLHNLPEFYKDPRPHISLAWALGDIAHSL 233

Query: 269 KRKTKQEIQRYCNNGGSVQKLGFTSKFRGIECKIGSKVYTICK 141
           K+   +E++  C  G S++K  F+ KF+ IECKIG K YTICK
Sbjct: 234 KKIVDEEMK--CAVGKSLKKCIFSCKFKSIECKIGKKAYTICK 274


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