BLASTX nr result

ID: Coptis21_contig00013044 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013044
         (862 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301111.1| predicted protein [Populus trichocarpa] gi|2...   292   8e-77
ref|XP_002527351.1| nucleic acid binding protein, putative [Rici...   291   2e-76
emb|CBI19299.3| unnamed protein product [Vitis vinifera]              290   3e-76
ref|XP_002285623.1| PREDICTED: XIAP-associated factor 1-like [Vi...   288   1e-75
emb|CBI19300.3| unnamed protein product [Vitis vinifera]              285   9e-75

>ref|XP_002301111.1| predicted protein [Populus trichocarpa] gi|222842837|gb|EEE80384.1|
           predicted protein [Populus trichocarpa]
          Length = 201

 Score =  292 bits (747), Expect = 8e-77
 Identities = 139/196 (70%), Positives = 158/196 (80%), Gaps = 1/196 (0%)
 Frame = +3

Query: 81  MAITSEQLTTICNHCDRAIPTPNIDLHTAHCARNLEKCKICGDMVPRRHVEEHYQNTHAP 260
           MA+ SE+ T+IC+HCDRAIP+ NIDLH AHC RNL+KCKICGDMVP++H EEH+ NTHAP
Sbjct: 1   MAVASEESTSICSHCDRAIPSSNIDLHYAHCFRNLKKCKICGDMVPKKHAEEHFLNTHAP 60

Query: 261 VACSLCSKTMEREILAVHKGENCPQRIVTCEFCEFPLPAVDLSEHQEVCGNRTEYCHLCS 440
           VACSLCS+TMEREILAVHKGENCPQRIVTCEFCEFPLPAVDL+EHQEVCGNRTE CH+C+
Sbjct: 61  VACSLCSETMEREILAVHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHMCN 120

Query: 441 RYIRLRERNDHEMRVHGSSDSTAGPSRDA-SAPXXXXXXXXXXXXXXVSQKHLLFTIAIT 617
           +YIRLRER +HE R  G  D+T   SRD  +A                S+K LLFTIAIT
Sbjct: 121 KYIRLRERYNHESRCTGLPDTTVESSRDVRAAERRQPQGPQRRQPQDFSRKRLLFTIAIT 180

Query: 618 GIAVLLGSIFFQRKTE 665
           GIAVLLGS  FQ+KTE
Sbjct: 181 GIAVLLGSFLFQKKTE 196


>ref|XP_002527351.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223533270|gb|EEF35023.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 199

 Score =  291 bits (744), Expect = 2e-76
 Identities = 131/195 (67%), Positives = 160/195 (82%)
 Frame = +3

Query: 81  MAITSEQLTTICNHCDRAIPTPNIDLHTAHCARNLEKCKICGDMVPRRHVEEHYQNTHAP 260
           MA+ SE+ TT+CNHC+RAIP+ N DLH+ HC+RNLEKCK+CGDM+P++H +EH+ NTHAP
Sbjct: 1   MAVASEETTTMCNHCNRAIPSLNYDLHSVHCSRNLEKCKVCGDMIPKKHYDEHFSNTHAP 60

Query: 261 VACSLCSKTMEREILAVHKGENCPQRIVTCEFCEFPLPAVDLSEHQEVCGNRTEYCHLCS 440
           VACSLCS+TMERE+LA+HKGENCPQRIVTCEFCEFPLPA+DL+EHQEVCGNRTE CHLC+
Sbjct: 61  VACSLCSETMEREVLAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCN 120

Query: 441 RYIRLRERNDHEMRVHGSSDSTAGPSRDASAPXXXXXXXXXXXXXXVSQKHLLFTIAITG 620
           RYIRLRER +HE+R  G +++  G SRD  A                S++ L+FTIAITG
Sbjct: 121 RYIRLRERYNHEIRCTGVTNNIVGTSRDVRA-AERPQGAPRRPPQDYSRRRLMFTIAITG 179

Query: 621 IAVLLGSIFFQRKTE 665
           IAV+LGS+ FQRKTE
Sbjct: 180 IAVILGSLLFQRKTE 194


>emb|CBI19299.3| unnamed protein product [Vitis vinifera]
          Length = 206

 Score =  290 bits (742), Expect = 3e-76
 Identities = 138/206 (66%), Positives = 160/206 (77%), Gaps = 7/206 (3%)
 Frame = +3

Query: 81  MAITSEQLTTICNHCDRAIPTPNIDLHTAHCARNLEKCKICGDMVPRRHVEEHYQNTHAP 260
           MA  S + T+IC+HCDR+IP+ NIDLH  HC+RNLE+CK CGDMVP++H EEHY NTHA 
Sbjct: 1   MATASNEATSICSHCDRSIPSTNIDLHYVHCSRNLERCKHCGDMVPKKHAEEHYLNTHAS 60

Query: 261 VACSLCSKTMEREILAVHKGENCPQRIVTCEFCEFPLPAVDLSEHQEVCGNRTEYCHLCS 440
           V+CSLCS+TMEREILAVH+GENCPQRIVTCEFCEFPLPA+DLSEHQEVCGNRTE CHLC 
Sbjct: 61  VSCSLCSETMEREILAVHRGENCPQRIVTCEFCEFPLPAIDLSEHQEVCGNRTELCHLCR 120

Query: 441 RYIRLRERNDHEMRVHGSS-------DSTAGPSRDASAPXXXXXXXXXXXXXXVSQKHLL 599
           RY+RLRERNDHE   +G S       D+T  PSRDA A                SQ+ +L
Sbjct: 121 RYVRLRERNDHEANCNGVSYDSVGVPDNTVSPSRDARA-AEREQGGRRRPPQEFSQRRVL 179

Query: 600 FTIAITGIAVLLGSIFFQRKTEARDL 677
           FTIAITGIAV+LGS+FFQRKTE  ++
Sbjct: 180 FTIAITGIAVILGSLFFQRKTENTEM 205


>ref|XP_002285623.1| PREDICTED: XIAP-associated factor 1-like [Vitis vinifera]
          Length = 207

 Score =  288 bits (736), Expect = 1e-75
 Identities = 135/206 (65%), Positives = 158/206 (76%), Gaps = 7/206 (3%)
 Frame = +3

Query: 81  MAITSEQLTTICNHCDRAIPTPNIDLHTAHCARNLEKCKICGDMVPRRHVEEHYQNTHAP 260
           MA  S + T+IC+HCDR+IP+ NIDLH  HC+RNLE+CK CGDMVP++H EEHY NTHA 
Sbjct: 1   MATASNEATSICSHCDRSIPSTNIDLHYVHCSRNLERCKHCGDMVPKKHAEEHYLNTHAS 60

Query: 261 VACSLCSKTMEREILAVHKGENCPQRIVTCEFCEFPLPAVDLSEHQEVCGNRTEYCHLCS 440
           V+CSLCS+TMEREILAVH+GENCPQRIVTCEFCEFPLPA+DLSEHQEVCGNRTE CHLC 
Sbjct: 61  VSCSLCSETMEREILAVHRGENCPQRIVTCEFCEFPLPAIDLSEHQEVCGNRTELCHLCR 120

Query: 441 RYIRLRERNDHEMRVHGSS-------DSTAGPSRDASAPXXXXXXXXXXXXXXVSQKHLL 599
           RY+RLRERNDHE   +G S       D+T  PSR  +                 SQ+ +L
Sbjct: 121 RYVRLRERNDHEANCNGVSYDSVGVPDNTVSPSRRDARAAEREQGGRRRPPQEFSQRRVL 180

Query: 600 FTIAITGIAVLLGSIFFQRKTEARDL 677
           FTIAITGIAV+LGS+FFQRKTE  ++
Sbjct: 181 FTIAITGIAVILGSLFFQRKTENTEM 206


>emb|CBI19300.3| unnamed protein product [Vitis vinifera]
          Length = 261

 Score =  285 bits (729), Expect = 9e-75
 Identities = 143/236 (60%), Positives = 167/236 (70%), Gaps = 21/236 (8%)
 Frame = +3

Query: 21  LQSEKRNRRETRFGIGT------FDLMAITSEQLTTICNHCDRAIPTPNIDLHTAHCARN 182
           LQ E R ++  R  I +      +  MAI S + T+IC+HCD+AIP+ NIDLH AHC+RN
Sbjct: 24  LQIEDRPKKIPRILIKSELFVIIYGSMAIASNESTSICSHCDKAIPSTNIDLHYAHCSRN 83

Query: 183 LEKCKICGDMVPRRHVEEHYQNTHAPVACSLCSKTMEREILAVHKGENCPQRIVTCEFCE 362
           LE+CK CGDMVP++H EEHY NTHA V+CSLCS+TMEREILAVHKGENCPQRIVTCEFCE
Sbjct: 84  LERCKHCGDMVPKKHAEEHYLNTHAAVSCSLCSETMEREILAVHKGENCPQRIVTCEFCE 143

Query: 363 FPLPAVDLSEHQEVCGNRTEYCHLCSRYIRLRERNDHEMRVHGSSDSTAG---------- 512
           FPLPA+DLSEHQEVCGNRTE CHLC RY+RL ERN HE   +G+ D++ G          
Sbjct: 144 FPLPAIDLSEHQEVCGNRTELCHLCRRYVRLCERNGHEAMCNGAPDNSVGVQDNGVGVSD 203

Query: 513 -----PSRDASAPXXXXXXXXXXXXXXVSQKHLLFTIAITGIAVLLGSIFFQRKTE 665
                  RDA A                SQ+ LLFTIAITGIAVLLGS+FFQ+KTE
Sbjct: 204 HTVSSSRRDARAAEREQGGQRRPPLQGFSQRRLLFTIAITGIAVLLGSLFFQKKTE 259


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