BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013043
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280795.2| PREDICTED: uncharacterized protein LOC100263...    60   9e-15
emb|CAN60541.1| hypothetical protein VITISV_018290 [Vitis vinifera]    58   7e-14
ref|XP_002319537.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-13
ref|XP_002512380.1| pentatricopeptide repeat-containing protein,...    53   2e-13
ref|XP_004139176.1| PREDICTED: pentatricopeptide repeat-containi...    54   4e-13

>ref|XP_002280795.2| PREDICTED: uncharacterized protein LOC100263014 [Vitis vinifera]
           gi|296088328|emb|CBI36773.3| unnamed protein product
           [Vitis vinifera]
          Length = 265

 Score = 60.1 bits (144), Expect(2) = 9e-15
 Identities = 28/44 (63%), Positives = 33/44 (75%)
 Frame = +3

Query: 24  CCPRIANSKLLRGGVFRECLNPFDEPECEAIDLFVNETLCIGKG 155
           CC R   S+++     RECL+PFDEPECEA DLFVNE LC+GKG
Sbjct: 119 CCSR---SEIIE----RECLDPFDEPECEAFDLFVNEVLCVGKG 155



 Score = 44.7 bits (104), Expect(2) = 9e-15
 Identities = 21/31 (67%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
 Frame = +2

Query: 149 KRCPHSCVQRAPHAFPF-SSTGTAQAISQDY 238
           K CP+SCV +APHAF F SSTGTA+A SQ +
Sbjct: 154 KGCPYSCVNKAPHAFTFVSSTGTARATSQGH 184


>emb|CAN60541.1| hypothetical protein VITISV_018290 [Vitis vinifera]
          Length = 322

 Score = 58.2 bits (139), Expect(2) = 7e-14
 Identities = 27/44 (61%), Positives = 32/44 (72%)
 Frame = +3

Query: 24  CCPRIANSKLLRGGVFRECLNPFDEPECEAIDLFVNETLCIGKG 155
           CC R   S+++     RECL+PFDEPECEA DLFVNE LC+G G
Sbjct: 118 CCSR---SEIIE----RECLDPFDEPECEAFDLFVNEVLCVGNG 154



 Score = 43.5 bits (101), Expect(2) = 7e-14
 Identities = 20/29 (68%), Positives = 24/29 (82%), Gaps = 1/29 (3%)
 Frame = +2

Query: 155 CPHSCVQRAPHAFPF-SSTGTAQAISQDY 238
           CP+SCV +APHAF F SSTGTA+A SQ +
Sbjct: 155 CPYSCVNKAPHAFTFVSSTGTARATSQGH 183


>ref|XP_002319537.1| predicted protein [Populus trichocarpa] gi|222857913|gb|EEE95460.1|
           predicted protein [Populus trichocarpa]
          Length = 266

 Score = 57.0 bits (136), Expect(2) = 1e-13
 Identities = 22/28 (78%), Positives = 26/28 (92%)
 Frame = +3

Query: 72  RECLNPFDEPECEAIDLFVNETLCIGKG 155
           RECL+PF+EPECEA D+FVNE LC+GKG
Sbjct: 129 RECLDPFEEPECEAFDIFVNEVLCVGKG 156



 Score = 44.3 bits (103), Expect(2) = 1e-13
 Identities = 21/31 (67%), Positives = 26/31 (83%), Gaps = 1/31 (3%)
 Frame = +2

Query: 149 KRCPHSCVQRAPHAFPF-SSTGTAQAISQDY 238
           K CP+SCVQRAP+AF + SSTGTA+A SQ +
Sbjct: 155 KGCPYSCVQRAPYAFTYASSTGTARATSQGH 185


>ref|XP_002512380.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548341|gb|EEF49832.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 736

 Score = 53.1 bits (126), Expect(2) = 2e-13
 Identities = 21/27 (77%), Positives = 23/27 (85%)
 Frame = +3

Query: 75  ECLNPFDEPECEAIDLFVNETLCIGKG 155
           ECL+PFD PECEA D+FVNE LC GKG
Sbjct: 600 ECLDPFDNPECEAFDIFVNEVLCAGKG 626



 Score = 47.0 bits (110), Expect(2) = 2e-13
 Identities = 25/41 (60%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
 Frame = +2

Query: 149 KRCPHSCVQRAPHAFPF-SSTGTAQAISQDYVLISGPTYKL 268
           K CP+SCVQ APHAF + SSTGTA+AISQ +    G  YK+
Sbjct: 625 KGCPYSCVQTAPHAFAYASSTGTARAISQGH----GEDYKV 661


>ref|XP_004139176.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g05340-like [Cucumis sativus]
          Length = 838

 Score = 53.9 bits (128), Expect(2) = 4e-13
 Identities = 21/28 (75%), Positives = 25/28 (89%)
 Frame = +3

Query: 72  RECLNPFDEPECEAIDLFVNETLCIGKG 155
           RECL+PF+ PECEA D+FVNE LC+GKG
Sbjct: 701 RECLDPFENPECEAFDVFVNEFLCVGKG 728



 Score = 45.1 bits (105), Expect(2) = 4e-13
 Identities = 21/31 (67%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
 Frame = +2

Query: 149 KRCPHSCVQRAPHAFPF-SSTGTAQAISQDY 238
           K CP+SCV RAPH F F SSTGTA+A+SQ +
Sbjct: 727 KGCPYSCVDRAPHVFTFASSTGTARAMSQGH 757