BLASTX nr result

ID: Coptis21_contig00013035 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013035
         (606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532657.1| conserved hypothetical protein [Ricinus comm...    97   2e-18
ref|NP_001158946.1| AGP16 precursor [Zea mays] gi|195608422|gb|A...    94   2e-17
ref|NP_001167672.1| AGP16 precursor [Zea mays] gi|195611018|gb|A...    94   2e-17
dbj|BAK07439.1| predicted protein [Hordeum vulgare subsp. vulgare]     93   4e-17
ref|XP_003563820.1| PREDICTED: arabinogalactan peptide 16-like [...    92   5e-17

>ref|XP_002532657.1| conserved hypothetical protein [Ricinus communis]
           gi|223527617|gb|EEF29730.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 75

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 50/68 (73%), Positives = 56/68 (82%), Gaps = 1/68 (1%)
 Frame = -2

Query: 425 RVSFGVMLVVTLIFSIVLPS-SAQGPAPAPTSDGTSIDQGIAYVLMLVALVLTYLIHPLD 249
           R  FG   + TL+F I  PS  AQ PAPAPTSDGT+IDQGIAY+LM+VALVLTYLIHPLD
Sbjct: 8   RTLFGFATIFTLLFVIFSPSVRAQAPAPAPTSDGTAIDQGIAYMLMVVALVLTYLIHPLD 67

Query: 248 ASSSYNFF 225
           ASSSY+FF
Sbjct: 68  ASSSYSFF 75


>ref|NP_001158946.1| AGP16 precursor [Zea mays] gi|195608422|gb|ACG26041.1| AGP16 [Zea
           mays]
          Length = 75

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 50/75 (66%), Positives = 57/75 (76%), Gaps = 4/75 (5%)
 Frame = -2

Query: 437 MEVCRVSFGV--MLVVTLIFSIVLPSSA--QGPAPAPTSDGTSIDQGIAYVLMLVALVLT 270
           M V R   G   M V  L+F+I++P++A  Q PAPAPTSDGTSID GIAY+LMLVALVLT
Sbjct: 1   MAVARAPLGAVAMAVAALVFAILMPAAAAAQAPAPAPTSDGTSIDLGIAYILMLVALVLT 60

Query: 269 YLIHPLDASSSYNFF 225
           YLIHPLDASS Y  F
Sbjct: 61  YLIHPLDASSPYKLF 75


>ref|NP_001167672.1| AGP16 precursor [Zea mays] gi|195611018|gb|ACG27339.1| AGP16 [Zea
           mays] gi|195621410|gb|ACG32535.1| AGP16 [Zea mays]
           gi|223948207|gb|ACN28187.1| unknown [Zea mays]
           gi|413936452|gb|AFW71003.1| hypothetical protein
           ZEAMMB73_583747 [Zea mays]
          Length = 73

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 48/73 (65%), Positives = 55/73 (75%), Gaps = 2/73 (2%)
 Frame = -2

Query: 437 MEVCRVSFGVMLVVTLIFSIVLPSSA--QGPAPAPTSDGTSIDQGIAYVLMLVALVLTYL 264
           M V R   G + V  L+ +I +P++A  Q PAPAPTSDGTSID GIAY+LMLVALVLTYL
Sbjct: 1   MAVVRAPLGAVAVAALVVAIFMPAAAAAQAPAPAPTSDGTSIDLGIAYILMLVALVLTYL 60

Query: 263 IHPLDASSSYNFF 225
           IHPLDASS Y  F
Sbjct: 61  IHPLDASSPYKLF 73


>dbj|BAK07439.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 72

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 48/67 (71%), Positives = 54/67 (80%), Gaps = 2/67 (2%)
 Frame = -2

Query: 419 SFGVMLVVTLIFSIVLPSSA--QGPAPAPTSDGTSIDQGIAYVLMLVALVLTYLIHPLDA 246
           S G++ V  L+  I +P+SA  Q PAPAP+SDGTSIDQGIAYVLMLVALVLTYLIHPLDA
Sbjct: 6   SVGLVAVAVLVVGIAMPASAAVQPPAPAPSSDGTSIDQGIAYVLMLVALVLTYLIHPLDA 65

Query: 245 SSSYNFF 225
           SS Y  F
Sbjct: 66  SSPYRLF 72


>ref|XP_003563820.1| PREDICTED: arabinogalactan peptide 16-like [Brachypodium
           distachyon]
          Length = 73

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 2/67 (2%)
 Frame = -2

Query: 419 SFGVMLVVTLIFSIVLPSSAQG--PAPAPTSDGTSIDQGIAYVLMLVALVLTYLIHPLDA 246
           S G++ V  L+  I +P+SA G  PAPAP+SDGTSIDQGIAYVLMLVALVLTYLIHPLDA
Sbjct: 7   SVGLVAVAVLVVGIAMPASAAGQPPAPAPSSDGTSIDQGIAYVLMLVALVLTYLIHPLDA 66

Query: 245 SSSYNFF 225
           +S Y  F
Sbjct: 67  TSPYKLF 73


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