BLASTX nr result
ID: Coptis21_contig00013035
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00013035 (606 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002532657.1| conserved hypothetical protein [Ricinus comm... 97 2e-18 ref|NP_001158946.1| AGP16 precursor [Zea mays] gi|195608422|gb|A... 94 2e-17 ref|NP_001167672.1| AGP16 precursor [Zea mays] gi|195611018|gb|A... 94 2e-17 dbj|BAK07439.1| predicted protein [Hordeum vulgare subsp. vulgare] 93 4e-17 ref|XP_003563820.1| PREDICTED: arabinogalactan peptide 16-like [... 92 5e-17 >ref|XP_002532657.1| conserved hypothetical protein [Ricinus communis] gi|223527617|gb|EEF29730.1| conserved hypothetical protein [Ricinus communis] Length = 75 Score = 97.4 bits (241), Expect = 2e-18 Identities = 50/68 (73%), Positives = 56/68 (82%), Gaps = 1/68 (1%) Frame = -2 Query: 425 RVSFGVMLVVTLIFSIVLPS-SAQGPAPAPTSDGTSIDQGIAYVLMLVALVLTYLIHPLD 249 R FG + TL+F I PS AQ PAPAPTSDGT+IDQGIAY+LM+VALVLTYLIHPLD Sbjct: 8 RTLFGFATIFTLLFVIFSPSVRAQAPAPAPTSDGTAIDQGIAYMLMVVALVLTYLIHPLD 67 Query: 248 ASSSYNFF 225 ASSSY+FF Sbjct: 68 ASSSYSFF 75 >ref|NP_001158946.1| AGP16 precursor [Zea mays] gi|195608422|gb|ACG26041.1| AGP16 [Zea mays] Length = 75 Score = 94.0 bits (232), Expect = 2e-17 Identities = 50/75 (66%), Positives = 57/75 (76%), Gaps = 4/75 (5%) Frame = -2 Query: 437 MEVCRVSFGV--MLVVTLIFSIVLPSSA--QGPAPAPTSDGTSIDQGIAYVLMLVALVLT 270 M V R G M V L+F+I++P++A Q PAPAPTSDGTSID GIAY+LMLVALVLT Sbjct: 1 MAVARAPLGAVAMAVAALVFAILMPAAAAAQAPAPAPTSDGTSIDLGIAYILMLVALVLT 60 Query: 269 YLIHPLDASSSYNFF 225 YLIHPLDASS Y F Sbjct: 61 YLIHPLDASSPYKLF 75 >ref|NP_001167672.1| AGP16 precursor [Zea mays] gi|195611018|gb|ACG27339.1| AGP16 [Zea mays] gi|195621410|gb|ACG32535.1| AGP16 [Zea mays] gi|223948207|gb|ACN28187.1| unknown [Zea mays] gi|413936452|gb|AFW71003.1| hypothetical protein ZEAMMB73_583747 [Zea mays] Length = 73 Score = 93.6 bits (231), Expect = 2e-17 Identities = 48/73 (65%), Positives = 55/73 (75%), Gaps = 2/73 (2%) Frame = -2 Query: 437 MEVCRVSFGVMLVVTLIFSIVLPSSA--QGPAPAPTSDGTSIDQGIAYVLMLVALVLTYL 264 M V R G + V L+ +I +P++A Q PAPAPTSDGTSID GIAY+LMLVALVLTYL Sbjct: 1 MAVVRAPLGAVAVAALVVAIFMPAAAAAQAPAPAPTSDGTSIDLGIAYILMLVALVLTYL 60 Query: 263 IHPLDASSSYNFF 225 IHPLDASS Y F Sbjct: 61 IHPLDASSPYKLF 73 >dbj|BAK07439.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 72 Score = 92.8 bits (229), Expect = 4e-17 Identities = 48/67 (71%), Positives = 54/67 (80%), Gaps = 2/67 (2%) Frame = -2 Query: 419 SFGVMLVVTLIFSIVLPSSA--QGPAPAPTSDGTSIDQGIAYVLMLVALVLTYLIHPLDA 246 S G++ V L+ I +P+SA Q PAPAP+SDGTSIDQGIAYVLMLVALVLTYLIHPLDA Sbjct: 6 SVGLVAVAVLVVGIAMPASAAVQPPAPAPSSDGTSIDQGIAYVLMLVALVLTYLIHPLDA 65 Query: 245 SSSYNFF 225 SS Y F Sbjct: 66 SSPYRLF 72 >ref|XP_003563820.1| PREDICTED: arabinogalactan peptide 16-like [Brachypodium distachyon] Length = 73 Score = 92.4 bits (228), Expect = 5e-17 Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 2/67 (2%) Frame = -2 Query: 419 SFGVMLVVTLIFSIVLPSSAQG--PAPAPTSDGTSIDQGIAYVLMLVALVLTYLIHPLDA 246 S G++ V L+ I +P+SA G PAPAP+SDGTSIDQGIAYVLMLVALVLTYLIHPLDA Sbjct: 7 SVGLVAVAVLVVGIAMPASAAGQPPAPAPSSDGTSIDQGIAYVLMLVALVLTYLIHPLDA 66 Query: 245 SSSYNFF 225 +S Y F Sbjct: 67 TSPYKLF 73