BLASTX nr result
ID: Coptis21_contig00013030
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00013030 (809 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002270752.1| PREDICTED: uncharacterized protein LOC100259... 90 5e-16 ref|XP_002524096.1| conserved hypothetical protein [Ricinus comm... 74 3e-11 ref|XP_002322767.1| predicted protein [Populus trichocarpa] gi|2... 67 5e-09 ref|XP_002309264.1| predicted protein [Populus trichocarpa] gi|2... 60 4e-07 >ref|XP_002270752.1| PREDICTED: uncharacterized protein LOC100259819 [Vitis vinifera] Length = 151 Score = 90.1 bits (222), Expect = 5e-16 Identities = 62/155 (40%), Positives = 77/155 (49%), Gaps = 7/155 (4%) Frame = +1 Query: 163 MTRQIVLETPSQSNRRQPLLSKNPPPSANGNTRFXXXXXXXXXXXXXXXXXXPCGLMNLL 342 MTRQIV+ PS NRRQPLL+ S++G+ RF PCGL+NLL Sbjct: 1 MTRQIVMRPPSL-NRRQPLLASQ---SSSGSIRFAEVAGETTAECAAVACCCPCGLVNLL 56 Query: 343 VLAVYKLPAGLC----XXXXXXXXXXTGLF-PHRKTCGCE-EDGEFQVHPVSVEMFKVE- 501 VLAVYK+PAGLC GL P R+ C C +D E Q+HP+S ++ + Sbjct: 57 VLAVYKVPAGLCRRALKKKRLRRMIKKGLLQPRRRRCPCGCDDTELQIHPISGDVTDADI 116 Query: 502 NXXXXXXXXXXXXXXXXXXXXFYSTGFWRSPSQRE 606 + FYSTGFWRS SQRE Sbjct: 117 SVKSNESEQEVMDLEKEMWDKFYSTGFWRSSSQRE 151 >ref|XP_002524096.1| conserved hypothetical protein [Ricinus communis] gi|223536664|gb|EEF38306.1| conserved hypothetical protein [Ricinus communis] Length = 252 Score = 74.3 bits (181), Expect = 3e-11 Identities = 58/176 (32%), Positives = 74/176 (42%), Gaps = 28/176 (15%) Frame = +1 Query: 163 MTRQIVLETPSQS--------NRRQPLLSKNPPPSANGNT-----RFXXXXXXXXXXXXX 303 ++RQI + PS S +R+ LL K+ SA+ N+ F Sbjct: 58 ISRQIFIHPPSPSPSSSSLSLKKRRSLLRKHAHSSASTNSSIRSGHFAEFAGGTTAECAA 117 Query: 304 XXXXXPCGLMNLLVLAVYKLPAGLC----XXXXXXXXXXTGLFPHRK---TCGCEEDGEF 462 PCGL+NLL LA+YK+PAGLC GL P R CGC+E E Sbjct: 118 ICCCCPCGLVNLLYLAIYKVPAGLCRRALRRKRRKQLMKEGLLPARTKRCRCGCDET-EI 176 Query: 463 QVHPVSVEMFKVE--------NXXXXXXXXXXXXXXXXXXXXFYSTGFWRSPSQRE 606 Q+HP + + + E N FYSTGFWRSPSQRE Sbjct: 177 QIHPEMIRLDEEETENGDDDDNNVADEEDDAMVKLEKEMWETFYSTGFWRSPSQRE 232 >ref|XP_002322767.1| predicted protein [Populus trichocarpa] gi|222867397|gb|EEF04528.1| predicted protein [Populus trichocarpa] Length = 171 Score = 67.0 bits (162), Expect = 5e-09 Identities = 48/145 (33%), Positives = 61/145 (42%), Gaps = 11/145 (7%) Frame = +1 Query: 205 RRQPLLSK-NPPPSANGNTRFXXXXXXXXXXXXXXXXXXPCGLMNLLVLAVYKLPAGLC- 378 +R+PLL N S+ + RF PCGL+NLLVL +YK+PAG+C Sbjct: 11 KRRPLLRHANSSGSSCCSGRFGEIAGGTTAECAAICCCCPCGLVNLLVLTIYKIPAGICR 70 Query: 379 ---XXXXXXXXXXTGLFPHRKT---CGCEEDGEFQVHP---VSVEMFKVENXXXXXXXXX 531 GLFP R CG +D E +HP V + + + Sbjct: 71 RALKRKQRKKLIKKGLFPPRGRGYGCGSCDDPELHIHPMARVEDSLREFDGEEAVKKEEA 130 Query: 532 XXXXXXXXXXXFYSTGFWRSPSQRE 606 FY TGFWRSPSQRE Sbjct: 131 MLRLEKEMWETFYGTGFWRSPSQRE 155 >ref|XP_002309264.1| predicted protein [Populus trichocarpa] gi|222855240|gb|EEE92787.1| predicted protein [Populus trichocarpa] Length = 188 Score = 60.5 bits (145), Expect = 4e-07 Identities = 38/105 (36%), Positives = 49/105 (46%), Gaps = 9/105 (8%) Frame = +1 Query: 319 PCGLMNLLVLAVYKLPAGLC----XXXXXXXXXXTGLFPHR-KTCGCEEDG-EFQVHP-- 474 PCGL+NLLVL +YK+P G+C GL P R ++C C+ DG E Q+HP Sbjct: 66 PCGLVNLLVLTMYKVPVGICRRALRRKRRKKLIKKGLLPPRTRSCSCDYDGTELQIHPMA 125 Query: 475 -VSVEMFKVENXXXXXXXXXXXXXXXXXXXXFYSTGFWRSPSQRE 606 V + + + F TGFWRS SQRE Sbjct: 126 CVEDSLREFDEEAALKEEEAMVKLEKEMWETFCGTGFWRSSSQRE 170