BLASTX nr result

ID: Coptis21_contig00013030 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013030
         (809 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270752.1| PREDICTED: uncharacterized protein LOC100259...    90   5e-16
ref|XP_002524096.1| conserved hypothetical protein [Ricinus comm...    74   3e-11
ref|XP_002322767.1| predicted protein [Populus trichocarpa] gi|2...    67   5e-09
ref|XP_002309264.1| predicted protein [Populus trichocarpa] gi|2...    60   4e-07

>ref|XP_002270752.1| PREDICTED: uncharacterized protein LOC100259819 [Vitis vinifera]
          Length = 151

 Score = 90.1 bits (222), Expect = 5e-16
 Identities = 62/155 (40%), Positives = 77/155 (49%), Gaps = 7/155 (4%)
 Frame = +1

Query: 163 MTRQIVLETPSQSNRRQPLLSKNPPPSANGNTRFXXXXXXXXXXXXXXXXXXPCGLMNLL 342
           MTRQIV+  PS  NRRQPLL+     S++G+ RF                  PCGL+NLL
Sbjct: 1   MTRQIVMRPPSL-NRRQPLLASQ---SSSGSIRFAEVAGETTAECAAVACCCPCGLVNLL 56

Query: 343 VLAVYKLPAGLC----XXXXXXXXXXTGLF-PHRKTCGCE-EDGEFQVHPVSVEMFKVE- 501
           VLAVYK+PAGLC               GL  P R+ C C  +D E Q+HP+S ++   + 
Sbjct: 57  VLAVYKVPAGLCRRALKKKRLRRMIKKGLLQPRRRRCPCGCDDTELQIHPISGDVTDADI 116

Query: 502 NXXXXXXXXXXXXXXXXXXXXFYSTGFWRSPSQRE 606
           +                    FYSTGFWRS SQRE
Sbjct: 117 SVKSNESEQEVMDLEKEMWDKFYSTGFWRSSSQRE 151


>ref|XP_002524096.1| conserved hypothetical protein [Ricinus communis]
           gi|223536664|gb|EEF38306.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 252

 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 58/176 (32%), Positives = 74/176 (42%), Gaps = 28/176 (15%)
 Frame = +1

Query: 163 MTRQIVLETPSQS--------NRRQPLLSKNPPPSANGNT-----RFXXXXXXXXXXXXX 303
           ++RQI +  PS S         +R+ LL K+   SA+ N+      F             
Sbjct: 58  ISRQIFIHPPSPSPSSSSLSLKKRRSLLRKHAHSSASTNSSIRSGHFAEFAGGTTAECAA 117

Query: 304 XXXXXPCGLMNLLVLAVYKLPAGLC----XXXXXXXXXXTGLFPHRK---TCGCEEDGEF 462
                PCGL+NLL LA+YK+PAGLC               GL P R     CGC+E  E 
Sbjct: 118 ICCCCPCGLVNLLYLAIYKVPAGLCRRALRRKRRKQLMKEGLLPARTKRCRCGCDET-EI 176

Query: 463 QVHPVSVEMFKVE--------NXXXXXXXXXXXXXXXXXXXXFYSTGFWRSPSQRE 606
           Q+HP  + + + E        N                    FYSTGFWRSPSQRE
Sbjct: 177 QIHPEMIRLDEEETENGDDDDNNVADEEDDAMVKLEKEMWETFYSTGFWRSPSQRE 232


>ref|XP_002322767.1| predicted protein [Populus trichocarpa] gi|222867397|gb|EEF04528.1|
           predicted protein [Populus trichocarpa]
          Length = 171

 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 48/145 (33%), Positives = 61/145 (42%), Gaps = 11/145 (7%)
 Frame = +1

Query: 205 RRQPLLSK-NPPPSANGNTRFXXXXXXXXXXXXXXXXXXPCGLMNLLVLAVYKLPAGLC- 378
           +R+PLL   N   S+  + RF                  PCGL+NLLVL +YK+PAG+C 
Sbjct: 11  KRRPLLRHANSSGSSCCSGRFGEIAGGTTAECAAICCCCPCGLVNLLVLTIYKIPAGICR 70

Query: 379 ---XXXXXXXXXXTGLFPHRKT---CGCEEDGEFQVHP---VSVEMFKVENXXXXXXXXX 531
                         GLFP R     CG  +D E  +HP   V   + + +          
Sbjct: 71  RALKRKQRKKLIKKGLFPPRGRGYGCGSCDDPELHIHPMARVEDSLREFDGEEAVKKEEA 130

Query: 532 XXXXXXXXXXXFYSTGFWRSPSQRE 606
                      FY TGFWRSPSQRE
Sbjct: 131 MLRLEKEMWETFYGTGFWRSPSQRE 155


>ref|XP_002309264.1| predicted protein [Populus trichocarpa] gi|222855240|gb|EEE92787.1|
           predicted protein [Populus trichocarpa]
          Length = 188

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 38/105 (36%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
 Frame = +1

Query: 319 PCGLMNLLVLAVYKLPAGLC----XXXXXXXXXXTGLFPHR-KTCGCEEDG-EFQVHP-- 474
           PCGL+NLLVL +YK+P G+C               GL P R ++C C+ DG E Q+HP  
Sbjct: 66  PCGLVNLLVLTMYKVPVGICRRALRRKRRKKLIKKGLLPPRTRSCSCDYDGTELQIHPMA 125

Query: 475 -VSVEMFKVENXXXXXXXXXXXXXXXXXXXXFYSTGFWRSPSQRE 606
            V   + + +                     F  TGFWRS SQRE
Sbjct: 126 CVEDSLREFDEEAALKEEEAMVKLEKEMWETFCGTGFWRSSSQRE 170


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