BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013025
         (676 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37137.3| unnamed protein product [Vitis vinifera]              161   1e-37
ref|XP_002272543.1| PREDICTED: DNA excision repair protein ERCC-...   161   1e-37
emb|CAN67815.1| hypothetical protein VITISV_002502 [Vitis vinifera]   150   3e-34
ref|XP_004151991.1| PREDICTED: DNA repair protein rhp26-like [Cu...   133   4e-29
ref|XP_003541362.1| PREDICTED: DNA repair and recombination prot...   122   8e-26

>emb|CBI37137.3| unnamed protein product [Vitis vinifera]
          Length = 1116

 Score =  161 bits (408), Expect = 1e-37
 Identities = 97/190 (51%), Positives = 117/190 (61%), Gaps = 10/190 (5%)
 Frame = +2

Query: 137 EEEDRILFSGLGVTSANPEDIERDVLAEAKDKV---GEVGGSIEEQLLDNEKVGDSSASS 307
           EEEDRIL S LGVTSANPED+ER++LA A ++     E G S EE+ LD  K  + S++S
Sbjct: 3   EEEDRILLSSLGVTSANPEDVEREILAAATNEAENGSEAGRSTEEEFLDKSKATELSSTS 62

Query: 308 RVKLQSKLRAVEVEIDAVAASFEQASSRVENEEYFSGSIDNGEQEGKEDDKNDIRNATNN 487
           + KL SKLRA+EVEIDAVA + +QA +   NE + S   DN  Q   EDDK  I+ + NN
Sbjct: 63  QAKLYSKLRALEVEIDAVAYTVQQARNTERNENHVSHGNDNRAQGDAEDDKLVIQASPNN 122

Query: 488 LNLQHALAKDRLRSLKKTKVQL-------QNXXXXXXXXXXXXXXXXVKEEVKPKRKLKE 646
           L LQHALA DRLRSLKKTK QL       Q                 VKEE +PK++LKE
Sbjct: 123 LTLQHALAADRLRSLKKTKAQLEIELSDWQKEKPSKTVEHDKVIQNLVKEEARPKKRLKE 182

Query: 647 AQASKKDTKK 676
              S KD KK
Sbjct: 183 IPKSGKDLKK 192


>ref|XP_002272543.1| PREDICTED: DNA excision repair protein ERCC-6-like [Vitis vinifera]
          Length = 1227

 Score =  161 bits (408), Expect = 1e-37
 Identities = 97/190 (51%), Positives = 117/190 (61%), Gaps = 10/190 (5%)
 Frame = +2

Query: 137 EEEDRILFSGLGVTSANPEDIERDVLAEAKDKV---GEVGGSIEEQLLDNEKVGDSSASS 307
           EEEDRIL S LGVTSANPED+ER++LA A ++     E G S EE+ LD  K  + S++S
Sbjct: 3   EEEDRILLSSLGVTSANPEDVEREILAAATNEAENGSEAGRSTEEEFLDKSKATELSSTS 62

Query: 308 RVKLQSKLRAVEVEIDAVAASFEQASSRVENEEYFSGSIDNGEQEGKEDDKNDIRNATNN 487
           + KL SKLRA+EVEIDAVA + +QA +   NE + S   DN  Q   EDDK  I+ + NN
Sbjct: 63  QAKLYSKLRALEVEIDAVAYTVQQARNTERNENHVSHGNDNRAQGDAEDDKLVIQASPNN 122

Query: 488 LNLQHALAKDRLRSLKKTKVQL-------QNXXXXXXXXXXXXXXXXVKEEVKPKRKLKE 646
           L LQHALA DRLRSLKKTK QL       Q                 VKEE +PK++LKE
Sbjct: 123 LTLQHALAADRLRSLKKTKAQLEIELSDWQKEKPSKTVEHDKVIQNLVKEEARPKKRLKE 182

Query: 647 AQASKKDTKK 676
              S KD KK
Sbjct: 183 IPKSGKDLKK 192


>emb|CAN67815.1| hypothetical protein VITISV_002502 [Vitis vinifera]
          Length = 1249

 Score =  150 bits (378), Expect = 3e-34
 Identities = 96/212 (45%), Positives = 115/212 (54%), Gaps = 32/212 (15%)
 Frame = +2

Query: 137 EEEDRILFSGLGVTSANPEDIERDVLAEAKDKV-------------------------GE 241
           EEEDRIL S LGVTSANPED+ER++LA   D +                          E
Sbjct: 3   EEEDRILLSSLGVTSANPEDVEREILAAYIDHIVPLGCRSVRVSFSNEPEATNEAENGSE 62

Query: 242 VGGSIEEQLLDNEKVGDSSASSRVKLQSKLRAVEVEIDAVAASFEQASSRVENEEYFSGS 421
            G S EE+ LD  K  + S++S+ KL SKL A+EVEIDAVA + +QA +   NE + S  
Sbjct: 63  AGRSTEEEFLDKSKATELSSTSQAKLYSKLXALEVEIDAVAYTVQQARNTERNENHVSHG 122

Query: 422 IDNGEQEGKEDDKNDIRNATNNLNLQHALAKDRLRSLKKTKVQL-------QNXXXXXXX 580
            DN  Q   EDDK  I+ + NNL LQHALA DRLRSLKKTK QL       Q        
Sbjct: 123 NDNRAQGDAEDDKLVIQASPNNLTLQHALAADRLRSLKKTKAQLEIELSDWQKEKPSKTV 182

Query: 581 XXXXXXXXXVKEEVKPKRKLKEAQASKKDTKK 676
                    VKEE +PK++LKE   S KD KK
Sbjct: 183 EHDKVIQNLVKEEARPKKRLKEIPKSGKDLKK 214


>ref|XP_004151991.1| PREDICTED: DNA repair protein rhp26-like [Cucumis sativus]
           gi|449522123|ref|XP_004168077.1| PREDICTED: DNA repair
           protein rhp26-like [Cucumis sativus]
          Length = 1221

 Score =  133 bits (334), Expect = 4e-29
 Identities = 86/184 (46%), Positives = 105/184 (57%), Gaps = 3/184 (1%)
 Frame = +2

Query: 134 EEEEDRILFSGLGVTSANPEDIERDVLAEAKDKVG---EVGGSIEEQLLDNEKVGDSSAS 304
           EE EDRI  + LGVTSANPEDIERD+L EAK K     EVGG  EE + D     DS ++
Sbjct: 2   EEVEDRIFLNSLGVTSANPEDIERDLLNEAKKKSENGVEVGGIEEENVCDKLDTTDSPSA 61

Query: 305 SRVKLQSKLRAVEVEIDAVAASFEQASSRVENEEYFSGSIDNGEQEGKEDDKNDIRNATN 484
           S V+L  KLRAVE EIDAVA++ E       NE++   S D+ +   +ED       + +
Sbjct: 62  SHVQLYQKLRAVEYEIDAVASTVEPGEKLERNEQHSCVSTDSQKHAREEDSV-----SAS 116

Query: 485 NLNLQHALAKDRLRSLKKTKVQLQNXXXXXXXXXXXXXXXXVKEEVKPKRKLKEAQASKK 664
              LQHALA DRLRSLKKT+ QL+N                VK+  KPKRK KE + S  
Sbjct: 117 GDGLQHALAVDRLRSLKKTQHQLKNELFHLNDKHAKTILEIVKDRSKPKRKSKEVKKSGN 176

Query: 665 DTKK 676
           D  K
Sbjct: 177 DGGK 180


>ref|XP_003541362.1| PREDICTED: DNA repair and recombination protein RAD26-like [Glycine
           max]
          Length = 1210

 Score =  122 bits (305), Expect = 8e-26
 Identities = 85/192 (44%), Positives = 110/192 (57%), Gaps = 11/192 (5%)
 Frame = +2

Query: 134 EEEEDRILFSGLGVTSANPEDIERDVLAEAKDK----VGEVGGSIEEQLLDNEKVGDSSA 301
           EEEEDRIL S LGV SANPEDIERDVL +A       V EV GS +E+  D  +  D SA
Sbjct: 2   EEEEDRILLSSLGVKSANPEDIERDVLEKATRNDLVTVTEVEGSAKEERSDLPENVDPSA 61

Query: 302 SSRVKLQSKLRAVEVEIDAVAASFEQASSRVENEEYFSGSIDNGEQEGKEDDKNDIRNAT 481
           + + +++ KLRAV+ EIDAVA++ E+ S+ VE+ E  S + ++G   G  + ++D     
Sbjct: 62  NDKAEIRQKLRAVQFEIDAVASAVERLSN-VEDNEECSDAGEDGPGRGTAEGESD----- 115

Query: 482 NNLNLQHALAKDRLRSLKKTKVQLQ-------NXXXXXXXXXXXXXXXXVKEEVKPKRKL 640
            N NLQ ALA DRLRSL+KTK QL+                        VKEE K KRK+
Sbjct: 116 GNSNLQRALAADRLRSLEKTKAQLEKELLDLFKDDDSKSAEHEELVLSLVKEERKSKRKV 175

Query: 641 KEAQASKKDTKK 676
           KE +   K   K
Sbjct: 176 KEDKKLNKSAGK 187