BLASTX nr result

ID: Coptis21_contig00013021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013021
         (2892 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298497.1| predicted protein [Populus trichocarpa] gi|2...   269   3e-69
ref|XP_002269146.1| PREDICTED: uncharacterized protein LOC100261...   266   2e-68
ref|XP_003599332.1| HIV Tat-specific factor-like protein [Medica...   260   1e-66
ref|XP_003551218.1| PREDICTED: uncharacterized protein LOC100819...   251   1e-63
ref|XP_003518322.1| PREDICTED: uncharacterized protein LOC100813...   250   1e-63

>ref|XP_002298497.1| predicted protein [Populus trichocarpa] gi|222845755|gb|EEE83302.1|
            predicted protein [Populus trichocarpa]
          Length = 399

 Score =  269 bits (688), Expect = 3e-69
 Identities = 141/264 (53%), Positives = 161/264 (60%), Gaps = 23/264 (8%)
 Frame = +1

Query: 595  PPANPSYGGAGGNYPPPSNAYGGTPSYGGDNAVPPPASYTXXXXXXXXXXXXXXXXXXXX 774
            PP+ PSYGG GGNYPP  N+YGG  +YG + AVPPP SYT                    
Sbjct: 143  PPSLPSYGGGGGNYPPAPNSYGGNANYGME-AVPPPTSYTGGPTSYPPSYGGPASGYGGD 201

Query: 775  XXXXRNSG-----------------------SGYGGSPAEVPAEKVKQCDENCGDTCDNA 885
                  SG                       SGYG +PA+ PA K+KQCD+NCGDTCDNA
Sbjct: 202  ATGEVRSGGRGGQPGGYEGGRGGGGSRNQGGSGYGAAPADAPA-KIKQCDDNCGDTCDNA 260

Query: 886  RIYISNLPADVTTDELQELFSGIGQVARIKQKRGYKDQWPYSIKIYTDDSGKSKGDAVLS 1065
            RIYISNLP DVT +EL+ELF GIGQV RIKQKRGYKDQWP++IKIYTD++G +KGDA L+
Sbjct: 261  RIYISNLPPDVTIEELRELFGGIGQVGRIKQKRGYKDQWPWNIKIYTDENGNNKGDACLA 320

Query: 1066 YEDPSAAHSAGGFYNNYELRGHKITVGMAEKSAPRPPSNFXXXXXXXXXXXXXXXXXXXX 1245
            YEDPSAAHSAGGFYNNY+ RG+KI V MAEKSAPR P++                     
Sbjct: 321  YEDPSAAHSAGGFYNNYDFRGYKINVAMAEKSAPRQPAH-----DHGGGRGGYGGGGRRR 375

Query: 1246 XXXXXXXXXXPDRHHHGGNRSRPY 1317
                      PDRH HGGNRSRPY
Sbjct: 376  DNYRDGGNSGPDRHQHGGNRSRPY 399


>ref|XP_002269146.1| PREDICTED: uncharacterized protein LOC100261263 [Vitis vinifera]
          Length = 462

 Score =  266 bits (681), Expect = 2e-68
 Identities = 161/368 (43%), Positives = 174/368 (47%), Gaps = 44/368 (11%)
 Frame = +1

Query: 346  WLCPNPSCGNSNFARRRECNKCGTPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 525
            WLCPNPSCGN NFARR ECNKCG PSP                                 
Sbjct: 100  WLCPNPSCGNLNFARRVECNKCGAPSPAGAGSDRGGGGGYNRGGSGGGFGGNRGGRGGNY 159

Query: 526  XXXXXXXXXXXXXXXXXXXXXQAPPANPSYGGAGGNYPPPS--NAYG------------- 660
                                     A    G  G    PP+   +YG             
Sbjct: 160  EGGSGGNRGGNYEGGSRGGSYGGNQARGGGGDGGFGQVPPAAPQSYGGGSAGYYPPPNSF 219

Query: 661  -GTPSYGGDNAVPPPASYT-------------------XXXXXXXXXXXXXXXXXXXXXX 780
             G  +YGG+ AVPPP SYT                                         
Sbjct: 220  GGNTNYGGE-AVPPPTSYTGGPTSYPPSYGGPASGYDGLGDTRGGGRAGPPAGGYDGGFG 278

Query: 781  XXRNSGSGY---------GGSPAEVPAEKVKQCDENCGDTCDNARIYISNLPADVTTDEL 933
              R  G GY         GGS  E P  KVKQCDENCGD+CDN+RIYISNLP DVT DEL
Sbjct: 279  GPRQQGGGYAGGGGGGGGGGSTTEAPV-KVKQCDENCGDSCDNSRIYISNLPPDVTVDEL 337

Query: 934  QELFSGIGQVARIKQKRGYKDQWPYSIKIYTDDSGKSKGDAVLSYEDPSAAHSAGGFYNN 1113
            +ELF GIGQV RIKQKRGYKDQWP++IKIYTD+ G +KGDA LSYEDPSAAHSAGGFYNN
Sbjct: 338  RELFGGIGQVGRIKQKRGYKDQWPWNIKIYTDEGGNNKGDACLSYEDPSAAHSAGGFYNN 397

Query: 1114 YELRGHKITVGMAEKSAPRPPSNFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDRHHH 1293
            YE+RG+KI V MAEKSAPR P  F                              PDRHHH
Sbjct: 398  YEMRGYKINVAMAEKSAPRAPPAF---GHGGGGRGGYGGGDRRRDNYRDNAGSGPDRHHH 454

Query: 1294 GGNRSRPY 1317
            GGNRSRPY
Sbjct: 455  GGNRSRPY 462


>ref|XP_003599332.1| HIV Tat-specific factor-like protein [Medicago truncatula]
            gi|355488380|gb|AES69583.1| HIV Tat-specific factor-like
            protein [Medicago truncatula]
          Length = 473

 Score =  260 bits (665), Expect = 1e-66
 Identities = 148/259 (57%), Positives = 165/259 (63%), Gaps = 16/259 (6%)
 Frame = +1

Query: 589  QAPP--ANPSYGGAGGNYPPPSNAYGGTPSYGGDNAVPPPASYTXXXXXXXXXXXXXXXX 762
            QAPP  A  SYGGAGGNYPP    YGG  +YG D AVPPP SYT                
Sbjct: 231  QAPPVAAAQSYGGAGGNYPP---TYGGNANYGTD-AVPPPTSYTGGPNSYPPSYGGNTGG 286

Query: 763  XXXXXXXXR---------NSGS--GYGGSPAE-VPAEKVKQCDENCGDTCDNARIYISNL 906
                              +SG+  G+GG+PAE  PA  VKQCDENCGDTCDN+RIYISNL
Sbjct: 287  YGGGDARSGGRAVPQAGYDSGNRGGFGGAPAEPAPAAPVKQCDENCGDTCDNSRIYISNL 346

Query: 907  PADVTTDELQELFSGIGQVARIKQKRGYKDQWPYSIKIYTDDSGKSKGDAVLSYEDPSAA 1086
            P DVT DELQ+LF GIGQV RIKQKRGYKDQWPY+IKIYTD++GK+KGDA L+YEDPSAA
Sbjct: 347  PPDVTVDELQQLFGGIGQVGRIKQKRGYKDQWPYNIKIYTDENGKNKGDACLAYEDPSAA 406

Query: 1087 HSAGGFYNNYELRGHKITVGMAEKSAPR-PPSNFXXXXXXXXXXXXXXXXXXXXXXXXXX 1263
            HSAGGFYN+Y+LRG+KI V MAEKSAPR PP+N                           
Sbjct: 407  HSAGGFYNDYDLRGYKIGVAMAEKSAPRAPPAN------------NHGGNRGGYGGDRRR 454

Query: 1264 XXXXPDRH-HHGGNRSRPY 1317
                PDR  H+GGNRSRPY
Sbjct: 455  DNSGPDRRDHYGGNRSRPY 473


>ref|XP_003551218.1| PREDICTED: uncharacterized protein LOC100819953 [Glycine max]
          Length = 457

 Score =  251 bits (640), Expect = 1e-63
 Identities = 137/260 (52%), Positives = 154/260 (59%), Gaps = 18/260 (6%)
 Frame = +1

Query: 592  APPANPSYGGAGGNYPPPSNAYGGTPSYGGDNAVPPPASYTXXXXXXXXXXXXXXXXXXX 771
            AP A    GGAGGNYPP  ++YGG  +  G  AVPPPASYT                   
Sbjct: 203  APTAQSYGGGAGGNYPPTYSSYGGGNASYGTEAVPPPASYTGGPNSYPPSYGGNVGGYGG 262

Query: 772  XXXXXRNSGS------------------GYGGSPAEVPAEKVKQCDENCGDTCDNARIYI 897
                   SG                   G+GGS AE PA  V+QCDENC DTCDN+RIYI
Sbjct: 263  DNQGDGRSGGRSGPPTGYDSTYGAGNRGGFGGSSAEPPAA-VRQCDENCDDTCDNSRIYI 321

Query: 898  SNLPADVTTDELQELFSGIGQVARIKQKRGYKDQWPYSIKIYTDDSGKSKGDAVLSYEDP 1077
            SNLP DVT +EL+ELF GIGQV RIKQKRGYKDQWP++IKIYTDD+G +KGDA L+YEDP
Sbjct: 322  SNLPPDVTIEELRELFGGIGQVGRIKQKRGYKDQWPWNIKIYTDDNGNNKGDACLAYEDP 381

Query: 1078 SAAHSAGGFYNNYELRGHKITVGMAEKSAPRPPSNFXXXXXXXXXXXXXXXXXXXXXXXX 1257
            SAAHSAGGFYNNY+LRG+KI+V MAEKSAPR P  +                        
Sbjct: 382  SAAHSAGGFYNNYDLRGYKISVAMAEKSAPRAPPAY----NQGGNRGGYGGDRRRDNYRD 437

Query: 1258 XXXXXXPDRHHHGGNRSRPY 1317
                  PDR  H GNRSRPY
Sbjct: 438  GGGGSGPDRRDHYGNRSRPY 457


>ref|XP_003518322.1| PREDICTED: uncharacterized protein LOC100813547 [Glycine max]
          Length = 404

 Score =  250 bits (639), Expect = 1e-63
 Identities = 136/259 (52%), Positives = 155/259 (59%), Gaps = 18/259 (6%)
 Frame = +1

Query: 595  PPANPSYGGAGGNYPPPSNAYGGTPSYGGDNAVPPPASYTXXXXXXXXXXXXXXXXXXXX 774
            PPA  SYGGAGGNYPP   +YGG  +Y  D  VPPPASYT                    
Sbjct: 153  PPAAQSYGGAGGNYPPAYGSYGGNSNYETD-VVPPPASYTGGPASGPPSYGSNAVTSGNN 211

Query: 775  XXXXRNSG-----------------SGYGGSPAEVPAEKVKQCDENCGDTCDNARIYISN 903
                R  G                  G+GG+PAE PA KVKQCDENCGD+CDN+RIYISN
Sbjct: 212  VADARYGGRSGPPVGNDSGYGAGSQGGFGGAPAEPPA-KVKQCDENCGDSCDNSRIYISN 270

Query: 904  LPADVTTDELQELFSGIGQVARIKQKRGYKDQWPYSIKIYTDDSGKSKGDAVLSYEDPSA 1083
            LP DVT +EL+ELF GIGQV RIKQKRGYKDQWP++IK+YTD+ G +KGD  L YEDPSA
Sbjct: 271  LPPDVTIEELRELFGGIGQVGRIKQKRGYKDQWPWNIKLYTDEKGNNKGDGCLVYEDPSA 330

Query: 1084 AHSAGGFYNNYELRGHKITVGMAEKSAPRPPSNFXXXXXXXXXXXXXXXXXXXXXXXXXX 1263
            AHSAG FYNNY+LRG+KI V MAEKSAP+ P  +                          
Sbjct: 331  AHSAGSFYNNYDLRGYKIGVAMAEKSAPKAPPAY-----NHGGNRSGYGGDRRRDNYRDG 385

Query: 1264 XXXXPDRH-HHGGNRSRPY 1317
                PDR  ++GGNRSRPY
Sbjct: 386  GSSGPDRRDNYGGNRSRPY 404



 Score = 60.1 bits (144), Expect = 3e-06
 Identities = 23/27 (85%), Positives = 23/27 (85%)
 Frame = +1

Query: 346 WLCPNPSCGNSNFARRRECNKCGTPSP 426
           W CPNPSCGN NFARR ECNKCG PSP
Sbjct: 53  WRCPNPSCGNLNFARRAECNKCGAPSP 79


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