BLASTX nr result

ID: Coptis21_contig00012477 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012477
         (1911 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264447.2| PREDICTED: uncharacterized protein LOC100244...   164   9e-51
ref|XP_002520404.1| conserved hypothetical protein [Ricinus comm...   143   6e-47
ref|XP_002271972.2| PREDICTED: uncharacterized protein LOC100261...   170   9e-47
emb|CBI29042.3| unnamed protein product [Vitis vinifera]              149   2e-40
emb|CAN77727.1| hypothetical protein VITISV_024318 [Vitis vinifera]   164   6e-39

>ref|XP_002264447.2| PREDICTED: uncharacterized protein LOC100244450 [Vitis vinifera]
          Length = 896

 Score =  164 bits (415), Expect(2) = 9e-51
 Identities = 85/187 (45%), Positives = 118/187 (63%)
 Frame = +1

Query: 967  EVKDRKVEMKRDEVIYYSKYIVHVLLPFLKQINEEQTIEKVVEAQIQGLSISDIKLQRID 1146
            + K  + EM +D+ I +SKY+V VLLPFL+Q + EQ +E+ +EA+IQGLS  +I++Q+  
Sbjct: 235  DTKTLEPEMSKDDKIKHSKYLVKVLLPFLEQFDHEQEMEREIEAKIQGLSPPEIQVQQAV 294

Query: 1147 SSIDERLYXXXXXXXXXXXXXXXXXXNNCKTSIVDYHRSCKNCSYDLCLICCREIRDGCL 1326
               DER+Y                  NNC+TSIVD+HR+C NCSYDLCL CCREIR+G L
Sbjct: 295  LREDERVYC-----------------NNCRTSIVDFHRNCPNCSYDLCLTCCREIRNGSL 337

Query: 1327 QGGGEDIDVDYPNRGKAYMHGSDRDPTSFPVKRDLDLSVEPSCKNHVNPRCKWSATENGT 1506
            QGG ++I + Y +RGKAY+HG      S   K + +  V  S K+  +  C+W   ENG 
Sbjct: 338  QGGIDEIVMQYFDRGKAYLHGGKPHMPSVQ-KGESNFCVSSSSKDPGSTICEWKVKENGD 396

Query: 1507 IPCPPEQ 1527
            IPC P++
Sbjct: 397  IPCAPKE 403



 Score = 64.7 bits (156), Expect(2) = 9e-51
 Identities = 31/73 (42%), Positives = 45/73 (61%)
 Frame = +3

Query: 1503 HHSVST*AIFPESWIMDLQEKAEEIDNNYKHLNTHGSSAVNCSCFDSAGDIDFGNKNVLK 1682
            H  +    +F E+W+ +L+EKAE +   +K  +  G  A +CSCF    +IDF NK + K
Sbjct: 409  HGRLDLKCMFSETWVSELKEKAEGLVKTHKLTDVLGIPACSCSCFKLNSEIDFDNKKLRK 468

Query: 1683 AASGEDSNNNYLY 1721
            AA+ EDS +NYLY
Sbjct: 469  AAAREDSFDNYLY 481


>ref|XP_002520404.1| conserved hypothetical protein [Ricinus communis]
            gi|223540389|gb|EEF41959.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1099

 Score =  143 bits (361), Expect(2) = 6e-47
 Identities = 71/178 (39%), Positives = 111/178 (62%)
 Frame = +1

Query: 982  KVEMKRDEVIYYSKYIVHVLLPFLKQINEEQTIEKVVEAQIQGLSISDIKLQRIDSSIDE 1161
            K+E+  D+++ + KY++  LLPFL+Q++EEQ +EK VEA+ QGLS  D+++Q  +   +E
Sbjct: 401  KLEISNDKILMHCKYLLQALLPFLRQLDEEQLMEKKVEARAQGLSSIDLEIQNANCPPNE 460

Query: 1162 RLYXXXXXXXXXXXXXXXXXXNNCKTSIVDYHRSCKNCSYDLCLICCREIRDGCLQGGGE 1341
            R++                  +NC+TSI DYHRSC NC  DLCLICC+EIR G LQGGG+
Sbjct: 461  RMFC-----------------DNCRTSIFDYHRSCSNCFSDLCLICCQEIRGGHLQGGGQ 503

Query: 1342 DIDVDYPNRGKAYMHGSDRDPTSFPVKRDLDLSVEPSCKNHVNPRCKWSATENGTIPC 1515
            ++ ++Y NRG  Y+HG++    S       ++ +E   ++ +  +  W A E+G+I C
Sbjct: 504  EVVMEYTNRGFEYLHGAEGTVIS-----PDEVPLENISEDLLGSKLGWKANEDGSIVC 556



 Score = 72.8 bits (177), Expect(2) = 6e-47
 Identities = 32/66 (48%), Positives = 49/66 (74%)
 Frame = +3

Query: 1527 IFPESWIMDLQEKAEEIDNNYKHLNTHGSSAVNCSCFDSAGDIDFGNKNVLKAASGEDSN 1706
            +FPE+W+ DL +KAE++   Y+ L+      V C+CF+S G++D GN ++LKAAS EDS+
Sbjct: 568  LFPENWVSDLLKKAEDVARGYE-LDMLKMPLVRCACFNSIGNVDVGNSHLLKAASREDSD 626

Query: 1707 NNYLYY 1724
            +N+LYY
Sbjct: 627  DNFLYY 632


>ref|XP_002271972.2| PREDICTED: uncharacterized protein LOC100261347 [Vitis vinifera]
          Length = 1199

 Score =  170 bits (431), Expect(2) = 9e-47
 Identities = 96/232 (41%), Positives = 131/232 (56%), Gaps = 11/232 (4%)
 Frame = +1

Query: 862  FGSPCTST---HSC*QLIIFSTTFMLSNCMIP-------SI*SP*EVKDRKVEMKRDEVI 1011
            F  PC  T   H   + I  S  F   NC          S+    E+   K+++  +E  
Sbjct: 510  FCIPCLETWYPHMSEEAIAESCPFCSGNCNCKACLRCDGSLKKMAELDYLKMKLSDEEKF 569

Query: 1012 YYSKYIVHVLLPFLKQINEEQTIEKVVEAQIQGLSISDIKLQRIDSSIDERLYXXXXXXX 1191
             +S+Y++  ++PFLKQ N+EQ +EK +EA+IQGLS S++K+QR+  + +ER Y       
Sbjct: 570  KHSRYLLQAVVPFLKQFNQEQMLEKEIEAKIQGLSPSELKIQRVVCNKNERAYC------ 623

Query: 1192 XXXXXXXXXXXNNCKTSIVDYHRSCKNCSYDLCLICCREIRDGCLQGGGEDIDVDYPNRG 1371
                       +NC+TSIVD+HRSC NCSYDLCLICCREIRDG LQGG E++ V   + G
Sbjct: 624  -----------DNCRTSIVDFHRSCPNCSYDLCLICCREIRDGHLQGGEEEVIVHVDSPG 672

Query: 1372 KAYMHG-SDRDPTSFPVKRDLDLSVEPSCKNHVNPRCKWSATENGTIPCPPE 1524
              Y+HG   R P S   KR L+     S K+H      W A +NG+IPCPP+
Sbjct: 673  LGYLHGDKSRFPESSRRKRKLNFPANASPKDHAKSMSGWEANKNGSIPCPPK 724



 Score = 45.1 bits (105), Expect(2) = 9e-47
 Identities = 23/62 (37%), Positives = 38/62 (61%)
 Frame = +3

Query: 1536 ESWIMDLQEKAEEIDNNYKHLNTHGSSAVNCSCFDSAGDIDFGNKNVLKAASGEDSNNNY 1715
            E++++ L  +AEEI ++ K ++  G+    CSC + A D D  N  + K AS +DS++N 
Sbjct: 742  ENFVLGLIMEAEEIASSNKLMDISGNPQQCCSCLNFADDNDTDNSKLRKGASRDDSSDNN 801

Query: 1716 LY 1721
            LY
Sbjct: 802  LY 803


>emb|CBI29042.3| unnamed protein product [Vitis vinifera]
          Length = 1019

 Score =  149 bits (376), Expect(2) = 2e-40
 Identities = 89/231 (38%), Positives = 121/231 (52%), Gaps = 10/231 (4%)
 Frame = +1

Query: 862  FGSPCTST---HSC*QLIIFSTTFMLSNCMIP-------SI*SP*EVKDRKVEMKRDEVI 1011
            F  PC  T   H   + I  S  F   NC          S+    E+   K+++  +E  
Sbjct: 348  FCIPCLETWYPHMSEEAIAESCPFCSGNCNCKACLRCDGSLKKMAELDYLKMKLSDEEKF 407

Query: 1012 YYSKYIVHVLLPFLKQINEEQTIEKVVEAQIQGLSISDIKLQRIDSSIDERLYXXXXXXX 1191
             +S+Y++  ++PFLKQ N+EQ +EK +EA+IQGLS S++K+QR+  + +ER Y       
Sbjct: 408  KHSRYLLQAVVPFLKQFNQEQMLEKEIEAKIQGLSPSELKIQRVVCNKNERAYC------ 461

Query: 1192 XXXXXXXXXXXNNCKTSIVDYHRSCKNCSYDLCLICCREIRDGCLQGGGEDIDVDYPNRG 1371
                       +NC+TSIVD+HRSC NCSYDLCLICCREIRDG LQGG E+         
Sbjct: 462  -----------DNCRTSIVDFHRSCPNCSYDLCLICCREIRDGHLQGGEEE--------- 501

Query: 1372 KAYMHGSDRDPTSFPVKRDLDLSVEPSCKNHVNPRCKWSATENGTIPCPPE 1524
                        S   KR L+     S K+H      W A +NG+IPCPP+
Sbjct: 502  ------------SSRRKRKLNFPANASPKDHAKSMSGWEANKNGSIPCPPK 540



 Score = 45.1 bits (105), Expect(2) = 2e-40
 Identities = 23/62 (37%), Positives = 38/62 (61%)
 Frame = +3

Query: 1536 ESWIMDLQEKAEEIDNNYKHLNTHGSSAVNCSCFDSAGDIDFGNKNVLKAASGEDSNNNY 1715
            E++++ L  +AEEI ++ K ++  G+    CSC + A D D  N  + K AS +DS++N 
Sbjct: 558  ENFVLGLIMEAEEIASSNKLMDISGNPQQCCSCLNFADDNDTDNSKLRKGASRDDSSDNN 617

Query: 1716 LY 1721
            LY
Sbjct: 618  LY 619


>emb|CAN77727.1| hypothetical protein VITISV_024318 [Vitis vinifera]
          Length = 969

 Score =  164 bits (415), Expect(2) = 6e-39
 Identities = 85/187 (45%), Positives = 118/187 (63%)
 Frame = +1

Query: 967  EVKDRKVEMKRDEVIYYSKYIVHVLLPFLKQINEEQTIEKVVEAQIQGLSISDIKLQRID 1146
            + K  + EM +D+ I +SKY+V VLLPFL+Q + EQ +E+ +EA+IQGLS  +I++Q+  
Sbjct: 234  DTKTLEPEMSKDDKIKHSKYLVKVLLPFLEQFDHEQEMEREIEAKIQGLSPPEIQVQQAV 293

Query: 1147 SSIDERLYXXXXXXXXXXXXXXXXXXNNCKTSIVDYHRSCKNCSYDLCLICCREIRDGCL 1326
               DER+Y                  NNC+TSIVD+HR+C NCSYDLCL CCREIR+G L
Sbjct: 294  LREDERVYC-----------------NNCRTSIVDFHRNCPNCSYDLCLTCCREIRNGSL 336

Query: 1327 QGGGEDIDVDYPNRGKAYMHGSDRDPTSFPVKRDLDLSVEPSCKNHVNPRCKWSATENGT 1506
            QGG ++I + Y +RGKAY+HG      S   K + +  V  S K+  +  C+W   ENG 
Sbjct: 337  QGGIDEIVMQYFDRGKAYLHGGKPHMPSVQ-KGESNFCVSSSSKDPGSTICEWKVKENGD 395

Query: 1507 IPCPPEQ 1527
            IPC P++
Sbjct: 396  IPCAPKE 402



 Score = 25.0 bits (53), Expect(2) = 6e-39
 Identities = 21/73 (28%), Positives = 29/73 (39%)
 Frame = +3

Query: 1503 HHSVST*AIFPESWIMDLQEKAEEIDNNYKHLNTHGSSAVNCSCFDSAGDIDFGNKNVLK 1682
            H  +    +F E+W+ +L+EKAE            GS                      K
Sbjct: 408  HGRLDLKCMFSETWVSELKEKAE------------GSWR--------------------K 435

Query: 1683 AASGEDSNNNYLY 1721
            AA+ EDS +NYLY
Sbjct: 436  AAAREDSFDNYLY 448


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