BLASTX nr result

ID: Coptis21_contig00012460 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012460
         (3172 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147658.1| PREDICTED: probable transcription factor Pos...   185   8e-44
ref|XP_004147651.1| PREDICTED: probable transcription factor Pos...   182   5e-43
ref|XP_002270784.1| PREDICTED: probable transcription factor Pos...   177   1e-41
ref|XP_002529479.1| Transcription factor RF2a, putative [Ricinus...   177   2e-41
ref|XP_003546876.1| PREDICTED: probable transcription factor Pos...   176   5e-41

>ref|XP_004147658.1| PREDICTED: probable transcription factor PosF21-like [Cucumis
            sativus] gi|449498835|ref|XP_004160648.1| PREDICTED:
            probable transcription factor PosF21-like [Cucumis
            sativus]
          Length = 412

 Score =  185 bits (469), Expect = 8e-44
 Identities = 127/354 (35%), Positives = 189/354 (53%), Gaps = 2/354 (0%)
 Frame = +2

Query: 1640 SKSSATCHGGSGGNASGL--PPLPPTTSVEGLSSSRRHSMCSFGTEASEILSRISEFPDR 1813
            S + ++ +G S   +S +  PPL P+T+ +   S R   + +  T  S  +SR+ E P R
Sbjct: 27   SSAESSFNGKSEATSSSMSFPPLAPSTNSDWGQSGR--GLSNDSTRFSNDISRMPENP-R 83

Query: 1814 KNIRHRRVHSEIVSLPDPEAILNGDFSTDFSIDVGYDGAGGNAHSLSDISDEEDTEDLVS 1993
            +N+ HRR HSEI++LPD        F +D  I  G DG      SLSD ++E    DL+S
Sbjct: 84   RNVGHRRAHSEILTLPDDIC-----FDSDLGIIGGADGP-----SLSDDTEE----DLLS 129

Query: 1994 MYINFDKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEXXXXXXXXXXXXXXXXXRIIRH 2173
            MY++ DKF                             E                 R+ RH
Sbjct: 130  MYLDMDKFNSSTATSANQVGDSSSPLV----------EAAATSTDDIAVGLKERPRV-RH 178

Query: 2174 HRSKSLDGTVFIKHDDDFLFSDAVPSPQLRRAMSPAEIAELALTDPKRAKRVLANRQSAA 2353
              S+S+DG   IK +     SD   +   ++AMS A++AELAL DPKRAKR+ ANRQSAA
Sbjct: 179  QHSQSMDGLTNIKPEMLVSGSDEASAADAKKAMSAAKLAELALIDPKRAKRIWANRQSAA 238

Query: 2354 RSKQRKLCYIATLERETQTLERKTITLATKVVMLKKGNSDLASENHELEMQLLNLEQRKY 2533
            RSK+RK+ YIA LER+ QTL+ +  +L+T++ +L++  + + +EN EL+++L  +EQ+ +
Sbjct: 239  RSKERKMRYIAELERKVQTLQTEATSLSTQLTLLQRDANGITAENSELKLRLQTMEQQVH 298

Query: 2534 MQDALTSELNEELWRLKWLAGEIIPKGKSVMQFSPSYVPNQQSCPSENVVRTFL 2695
            +QDAL   L EE+  LK L G+ +P G+S+  F+      Q   P+   V T L
Sbjct: 299  LQDALNEALKEEIQHLKVLTGQAMPNGRSITNFASFGAGQQFYAPNNQAVHTLL 352


>ref|XP_004147651.1| PREDICTED: probable transcription factor PosF21-like [Cucumis
            sativus] gi|449498815|ref|XP_004160642.1| PREDICTED:
            probable transcription factor PosF21-like [Cucumis
            sativus]
          Length = 416

 Score =  182 bits (462), Expect = 5e-43
 Identities = 139/414 (33%), Positives = 199/414 (48%), Gaps = 18/414 (4%)
 Frame = +2

Query: 1637 ISKSSATCHGGSGGNASG--LPPLPPTTSVEGLSSSRR--HSMCSFGTEASEILSRISEF 1804
            +S + +  +G S   +S   LPP+P      GLS S +  H M +     S  +SR+ + 
Sbjct: 23   LSPTGSIFNGKSEATSSSMLLPPMPSG----GLSDSGQFGHGMPTDSNRFSHDISRMPDN 78

Query: 1805 PDRKNIRHRRVHSEIVSLPDPEAILNGDFSTDFSIDVGYDGAGGNAHSLSDISDEEDTE- 1981
            P R NI HRR HSEI++LPD               D+ +D   G   S    S  +DTE 
Sbjct: 79   PPR-NIGHRRAHSEILTLPD---------------DICFDNDLGVIGSADGPSFSDDTEE 122

Query: 1982 DLVSMYINFDKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEXXXXXXXXXXXXXXXXXR 2161
            DL+SMY++ DKF                                                
Sbjct: 123  DLLSMYLDMDKFNSSTATSTIQVGESSSAVGEARSTPTSTIGAATSKDDAAVGLKERPR- 181

Query: 2162 IIRHHRSKSLDGTVFIKHDDDFLFSDAVPSPQLRRAMSPAEIAELALTDPKRAKRVLANR 2341
             +RH  S+S+DG   IK +     SD   +   ++AMS  ++AELAL DPKRAKR+ ANR
Sbjct: 182  -VRHQHSQSMDGLTTIKPEMLVSGSDEASAADCKKAMSATKLAELALIDPKRAKRIWANR 240

Query: 2342 QSAARSKQRKLCYIATLERETQTLERKTITLATKVVMLKKGNSDLASENHELEMQLLNLE 2521
            QSAARSK+RK+ YIA LER+ QTL+ +  +L+ ++ +L++  + L++EN+EL+++L  +E
Sbjct: 241  QSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLSAENNELKLRLQTME 300

Query: 2522 QRKYMQDALTSELNEELWRLKWLAGEIIPKGKSVMQFSPSYVPNQQSCPSENVVRTFLA- 2698
            Q+ ++QDAL   L EE+  LK L G+ IP G SV  F+ S+   Q   PS   + T L  
Sbjct: 301  QQVHLQDALNEALKEEIQHLKVLTGQAIPNGGSVTNFA-SFGAAQPFYPSNQAMHTLLTA 359

Query: 2699 ------------EXXXXXXXXXXXXXXXXTGDKKIDGSKSSPTETDHSTDVQSS 2824
                        +                TGD K  GS SSP   D++T   SS
Sbjct: 360  QQFQQLQIHSQQQQQHFQYHQLHQLHQQSTGDNKSKGSASSPNPKDNNTSDTSS 413


>ref|XP_002270784.1| PREDICTED: probable transcription factor PosF21 [Vitis vinifera]
          Length = 425

 Score =  177 bits (450), Expect = 1e-41
 Identities = 121/339 (35%), Positives = 172/339 (50%)
 Frame = +2

Query: 1679 NASGLPPLPPTTSVEGLSSSRRHSMCSFGTEASEILSRISEFPDRKNIRHRRVHSEIVSL 1858
            ++  LPPLP  +  E  SS   H +       S  +SR+ + P  KN+ HRR HSEI++L
Sbjct: 36   SSPNLPPLPVGSGSE--SSHFGHGISPDSNRFSHDISRMPDNPP-KNLGHRRAHSEILTL 92

Query: 1859 PDPEAILNGDFSTDFSIDVGYDGAGGNAHSLSDISDEEDTEDLVSMYINFDKFXXXXXXX 2038
            PD            F  D+G  G G +  S SD    E  EDL SMY++ DK        
Sbjct: 93   PD---------DLSFDSDLGVVG-GADGPSFSD----ETEEDLFSMYLDMDKLNSSSATS 138

Query: 2039 XXXXXXXXXXXXXXXXXXXXXXEXXXXXXXXXXXXXXXXXRIIRHHRSKSLDGTVFIKHD 2218
                                                    R +RH  S+S+DG+  IK +
Sbjct: 139  SFQMGEPSSAAPLGSASAAMTENVVARPND----------RRVRHQHSQSMDGSTSIKPE 188

Query: 2219 DDFLFSDAVPSPQLRRAMSPAEIAELALTDPKRAKRVLANRQSAARSKQRKLCYIATLER 2398
                 SD   +   ++AMS A++AELAL DPKRAKR+ ANRQSAARSK+RK+ YIA LER
Sbjct: 189  MLMSGSDENSAADSKKAMSAAKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELER 248

Query: 2399 ETQTLERKTITLATKVVMLKKGNSDLASENHELEMQLLNLEQRKYMQDALTSELNEELWR 2578
            + QTL+ +  +L+ ++ +L++  + L +EN EL+++L  +EQ+  +QDAL   L EE+  
Sbjct: 249  KVQTLQTEATSLSAQLTLLQRDTNGLTAENSELKLRLQTMEQQVNLQDALNDALKEEIQH 308

Query: 2579 LKWLAGEIIPKGKSVMQFSPSYVPNQQSCPSENVVRTFL 2695
            LK L G+ +P G  +M F  SY    Q  P+   + T L
Sbjct: 309  LKVLTGQTMPNGAPMMNFPQSYGTGAQFYPNNQAMHTLL 347


>ref|XP_002529479.1| Transcription factor RF2a, putative [Ricinus communis]
            gi|223531037|gb|EEF32889.1| Transcription factor RF2a,
            putative [Ricinus communis]
          Length = 425

 Score =  177 bits (449), Expect = 2e-41
 Identities = 132/413 (31%), Positives = 195/413 (47%), Gaps = 31/413 (7%)
 Frame = +2

Query: 1679 NASGLPPLPPTTSVEGLSSSRRHSMCSFGTEASEILSRISEFPDR--KNIRHRRVHSEIV 1852
            +A+ LPP+ P     G SS   H     G+++S     IS  PD   K + HRR HSEI+
Sbjct: 36   SAAALPPIAP-----GSSSDPSHF--GHGSDSSRFSHDISRMPDNPPKKLGHRRAHSEIL 88

Query: 1853 SLPDPEAILNGDFSTDFSIDVGYDGAGGNAHSLSDISDEEDTEDLVSMYINFDKFXXXXX 2032
            +LPD            F  D+G  G G +  S SD    E  EDL SMY++ DKF     
Sbjct: 89   TLPD---------DISFDSDLGVVG-GADGPSFSD----ETEEDLFSMYLDMDKFNSSSA 134

Query: 2033 XXXXXXXXXXXXXXXXXXXXXXXXEXXXXXXXXXXXXXXXXXRIIRHHRSKSLDGTVFIK 2212
                                                        IRH  S+S+DG+  IK
Sbjct: 135  TSAFQLGESSIPTPAALASASAQAPATVDVGAGPSERPR-----IRHQHSQSMDGSTTIK 189

Query: 2213 HDDDFLFSDAVPSPQLRRAMSPAEIAELALTDPKRAKRVLANRQSAARSKQRKLCYIATL 2392
             +     ++ V     ++AMS A++AELAL DPKRAKR+ ANRQSAARSK+RK+ YIA L
Sbjct: 190  PEMLISGAEEVSPADTKKAMSAAKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAEL 249

Query: 2393 ERETQTLERKTITLATKVVMLKKGNSDLASENHELEMQLLNLEQRKYMQDALTSELNEEL 2572
            ER+ QTL+ +  +L+ ++ +L++  + L +EN EL+++L  +EQ+ ++QDAL   L EE+
Sbjct: 250  ERKVQTLQTEATSLSAQLTLLQRDTNGLTAENSELKLRLQTMEQQVHLQDALNDALKEEI 309

Query: 2573 WRLKWLAGEIIPKGKSVMQFSPSYVPNQQSCPSENVVRTFLA------------------ 2698
              LK L G+ +  G  +M ++ S+   QQ  P+ + + T L                   
Sbjct: 310  QHLKVLTGQAMANGGPMMNYN-SFGTGQQFYPNNHAMHTLLTTQQFQQLQIHSQKQQHQF 368

Query: 2699 -----------EXXXXXXXXXXXXXXXXTGDKKIDGSKSSPTETDHSTDVQSS 2824
                       +                +GD K+ G+ SSP + D+S+DV S+
Sbjct: 369  QQHQLHQLQQQQQLQQQQQHQQQEQQQQSGDLKMRGTMSSPNQKDNSSDVNST 421


>ref|XP_003546876.1| PREDICTED: probable transcription factor PosF21-like [Glycine max]
          Length = 420

 Score =  176 bits (445), Expect = 5e-41
 Identities = 120/337 (35%), Positives = 174/337 (51%), Gaps = 2/337 (0%)
 Frame = +2

Query: 1694 PPLPPTTSVEGLSSSRRHSMCSFGTEASEILSRISEFPDR--KNIRHRRVHSEIVSLPDP 1867
            PPL P T+    SS   H      T++S     IS  PD   +N  HRR HSEI++LPD 
Sbjct: 42   PPLAPGTT----SSESSHFGHGLSTDSSGFSHDISRMPDNPPRNRGHRRAHSEILTLPD- 96

Query: 1868 EAILNGDFSTDFSIDVGYDGAGGNAHSLSDISDEEDTEDLVSMYINFDKFXXXXXXXXXX 2047
                       F  D+G  G GG+  S SD ++E    DL+SMY++ DKF          
Sbjct: 97   --------DISFDSDLGVVG-GGDGPSFSDDAEE----DLLSMYLDMDKFNSSSATSTFQ 143

Query: 2048 XXXXXXXXXXXXXXXXXXXEXXXXXXXXXXXXXXXXXRIIRHHRSKSLDGTVFIKHDDDF 2227
                                                   +RH  S+S+DG+  IK +   
Sbjct: 144  MVEPSNAVGASASTPASGAPTSSTENVVIGTNERPR---VRHQHSQSMDGSTTIKPEMLV 200

Query: 2228 LFSDAVPSPQLRRAMSPAEIAELALTDPKRAKRVLANRQSAARSKQRKLCYIATLERETQ 2407
              S+ + +   ++AMS A++AELAL DPKRAKR+ ANRQSAARSK+RK+ YIA LER+ Q
Sbjct: 201  SGSEDMSAADSKKAMSAAKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQ 260

Query: 2408 TLERKTITLATKVVMLKKGNSDLASENHELEMQLLNLEQRKYMQDALTSELNEELWRLKW 2587
            TL+ +  +L+ ++ +L++  + L SEN+EL+++L  +EQ+ ++QDAL   L EE+  LK 
Sbjct: 261  TLQTEATSLSAQLTLLQRDTNGLNSENNELKLRLQTMEQQVHLQDALNDALKEEIQHLKI 320

Query: 2588 LAGEIIPKGKSVMQFSPSYVPNQQSCPSENVVRTFLA 2698
            L G+ +P     M    S+   QQ  P+ + + T LA
Sbjct: 321  LTGQAMPPNGGPMMNFASFGGGQQFYPNNHAMHTLLA 357


Top