BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012458
         (879 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR15913.1| S3 self-incompatibility locus-linked putative F-b...   110   6e-22
gb|AAU14836.1| S3 putative F-box protein SLF-S3B [Petunia x hybr...   105   1e-20
gb|AAR15915.1| S2 self-incompatibility locus-linked putative F-b...   105   1e-20
gb|AAR15911.1| S1 self-incompatibility locus-linked putative F-b...   104   2e-20
dbj|BAC66624.1| F-box [Prunus mume]                                   104   3e-20

>gb|AAR15913.1| S3 self-incompatibility locus-linked putative F-box protein S3-A113
           [Petunia integrifolia subsp. inflata]
          Length = 376

 Score =  110 bits (274), Expect = 6e-22
 Identities = 73/214 (34%), Positives = 113/214 (52%), Gaps = 5/214 (2%)
 Frame = -2

Query: 671 LPEDVVFTILLWLPVASLLRFKSVCKSWCSLIESSPFITQHLATLKDNNDDHQLIIFDPF 492
           LP+DVV  IL+ LPV SLLRFK  CK++C++I+SS FI  HL     N  D  +++   F
Sbjct: 4   LPQDVVIYILVMLPVKSLLRFKCSCKTFCNIIKSSTFIYLHL-NHTTNVKDELVLLKRSF 62

Query: 491 QCDDTTCYSPTIFFLLSGSNYKVPKV---LDLPHRFDYAVDSHHPQQTPIIIASCNGIIC 321
           + DD   Y   + FL S   Y    +   +++PH    +    H      +I  CNG+I 
Sbjct: 63  KTDDYNFYKSILSFLSSKEGYDFKSISPDVEIPHLTTTSACVFHQ-----LIGPCNGLIA 117

Query: 320 LRPGLSSENVSLWNPALREFRILPKPSVPSEELVPGSWLDFY--FGFGYDAKTNDYKVVK 147
           L   L++    ++NPA R++R++P    P    +P  +       GFG+D+  NDYKVV+
Sbjct: 118 LTDSLTT---IVFNPATRKYRLIP----PCPFGIPRGFRRSISGIGFGFDSDANDYKVVR 170

Query: 146 VIFLDQMTCRVELYKVELYRVELYSLSTDSWRPI 45
           +  + +  C  E+      +V++Y  S DSWR +
Sbjct: 171 LSEVYKEPCDKEM------KVDIYDFSVDSWREL 198


>gb|AAU14836.1| S3 putative F-box protein SLF-S3B [Petunia x hybrida]
          Length = 379

 Score =  105 bits (263), Expect = 1e-20
 Identities = 70/214 (32%), Positives = 113/214 (52%), Gaps = 5/214 (2%)
 Frame = -2

Query: 671 LPEDVVFTILLWLPVASLLRFKSVCKSWCSLIESSPFITQHLATLKDNNDDHQLIIFDPF 492
           LP+DVV  I + LPV SLLRFK  CK++C +I+SS FI  HL    + ND+  +++   F
Sbjct: 4   LPQDVVIYIFVMLPVKSLLRFKCTCKTFCHIIKSSTFINLHLNHTTNFNDE-LVLLKRSF 62

Query: 491 QCDDTTCYSPTIFFLLSGSNYKVPKV---LDLPHRFDYAVDSHHPQQTPIIIASCNGIIC 321
           + D+   Y   + FL +  +Y    +   +++PH    A    H      +I  CNG+I 
Sbjct: 63  ETDEYNFYKSILSFLFAKEDYDFKPISPDVEIPHLTTTAACVCHR-----LIGPCNGLIV 117

Query: 320 LRPGLSSENVSLWNPALREFRILPKPSVPSEELVPGSWLDFY--FGFGYDAKTNDYKVVK 147
           L   L++    ++NPA  ++R++P    P    +P  +       GFG+D+  NDYKVV+
Sbjct: 118 LTDSLTT---IVFNPATLKYRLIP----PCPFGIPRGFRRSISGIGFGFDSDANDYKVVR 170

Query: 146 VIFLDQMTCRVELYKVELYRVELYSLSTDSWRPI 45
           +  + +  C  E+      +V++Y  S DSWR +
Sbjct: 171 LSEVYKEPCDKEM------KVDIYDFSVDSWREL 198


>gb|AAR15915.1| S2 self-incompatibility locus-linked putative F-box protein S2-A134
           [Petunia integrifolia subsp. inflata]
          Length = 379

 Score =  105 bits (262), Expect = 1e-20
 Identities = 70/214 (32%), Positives = 113/214 (52%), Gaps = 5/214 (2%)
 Frame = -2

Query: 671 LPEDVVFTILLWLPVASLLRFKSVCKSWCSLIESSPFITQHLATLKDNNDDHQLIIFDPF 492
           LP+DVV  I + LPV SLLRFK  CK++C +I+SS FI  HL    + ND+  +++   F
Sbjct: 4   LPQDVVIYIFVMLPVKSLLRFKCTCKTFCHIIKSSTFINLHLNHTTNFNDE-LVLLKRSF 62

Query: 491 QCDDTTCYSPTIFFLLSGSNYKVPKV---LDLPHRFDYAVDSHHPQQTPIIIASCNGIIC 321
           + D+   Y   + FL +  +Y    +   +++PH    A    H      +I  CNG+I 
Sbjct: 63  ETDEYKFYKSILSFLFAKEDYDFKPISPDVEIPHLTTTAACVCHR-----LIGPCNGLIV 117

Query: 320 LRPGLSSENVSLWNPALREFRILPKPSVPSEELVPGSWLDFY--FGFGYDAKTNDYKVVK 147
           L   L++    ++NPA  ++R++P    P    +P  +       GFG+D+  NDYKVV+
Sbjct: 118 LTDSLTT---IVFNPATLKYRLIP----PCPFGIPRGFRRSISGIGFGFDSDANDYKVVR 170

Query: 146 VIFLDQMTCRVELYKVELYRVELYSLSTDSWRPI 45
           +  + +  C  E+      +V++Y  S DSWR +
Sbjct: 171 LSEVYKEPCDKEM------KVDIYDFSVDSWREL 198


>gb|AAR15911.1| S1 self-incompatibility locus-linked putative F-box protein S1-A113
           [Petunia integrifolia subsp. inflata]
           gi|45553269|gb|AAR15912.2| S2 self-incompatibility
           locus-linked putative F-box protein S2-A113 [Petunia
           integrifolia subsp. inflata]
          Length = 376

 Score =  104 bits (260), Expect = 2e-20
 Identities = 69/214 (32%), Positives = 113/214 (52%), Gaps = 5/214 (2%)
 Frame = -2

Query: 671 LPEDVVFTILLWLPVASLLRFKSVCKSWCSLIESSPFITQHLATLKDNNDDHQLIIFDPF 492
           LP+DVV  IL+ LPV SLLRFK  CK++C++I+SS F+  HL       D+  +++   F
Sbjct: 4   LPQDVVIYILVMLPVKSLLRFKCSCKTFCNIIKSSTFVNLHLNHTTKVKDE-LVLLKRSF 62

Query: 491 QCDDTTCYSPTIFFLLSGSNYKVPKV---LDLPHRFDYAVDSHHPQQTPIIIASCNGIIC 321
           + D+   Y   + F  S  +Y    +   +++PH    +    H      +I  CNG+I 
Sbjct: 63  KTDEYNFYKSILSFFSSKEDYDFMPMSPDVEIPHLTTTSARVFHQ-----LIGPCNGLIA 117

Query: 320 LRPGLSSENVSLWNPALREFRILPKPSVPSEELVPGSWLDFY--FGFGYDAKTNDYKVVK 147
           L   L++    ++NPA R++R++P    P    +P  +       GFG+D+  NDYKVV+
Sbjct: 118 LTDSLTT---IVFNPATRKYRLIP----PCPFGIPRGFRRSISGIGFGFDSDVNDYKVVR 170

Query: 146 VIFLDQMTCRVELYKVELYRVELYSLSTDSWRPI 45
           +  + +  C  E+      +V++Y  S DSWR +
Sbjct: 171 LSEVYKEPCDKEM------KVDIYDFSVDSWREL 198


>dbj|BAC66624.1| F-box [Prunus mume]
          Length = 409

 Score =  104 bits (259), Expect = 3e-20
 Identities = 81/239 (33%), Positives = 111/239 (46%), Gaps = 31/239 (12%)
 Frame = -2

Query: 647 ILLWLPVASLLRFKSVCKSWCSLIESSPFITQHLATLKDNNDDHQ----LIIFDPFQCDD 480
           IL  LP  SL+RFK V KSW SLI +  F+  HL     +N  H      ++F  F   D
Sbjct: 10  ILPRLPSKSLMRFKCVRKSWYSLINNPTFVENHL-----SNSMHSKLCTCVLFSRFVQRD 64

Query: 479 TTCYSPTI--FFLLSGSNYKVPKVLDLPHRFDYAVD------------SHHPQQTPIIIA 342
           T      +   FL   ++Y      D  H  ++ V+                 ++P I+ 
Sbjct: 65  TNSDGKELAFSFLYLRNDYD-----DDEHNVNFVVEDIKFPLSSGRFIGLEDVESPSILG 119

Query: 341 SCNGIICLRPGLSSENVSLWNPALREFRILPKPSVPSEELVPGSWLDFYFGFGYDAKTND 162
            CNGI+C+ P   S+N+ L NPA++E ++LPK  +P        W     GFGYD K+ D
Sbjct: 120 HCNGIVCISP--CSDNLVLCNPAIKEIKLLPKSGLP-------DWWGCAVGFGYDPKSKD 170

Query: 161 YKVVKVIFLDQMTCRVELYKVEL------YRVELYSLSTDSWRPI-------DTVVPFP 24
           YKV          CR+  Y+ E+       RVE+Y+LSTDSWR I       DT   FP
Sbjct: 171 YKV----------CRIASYQAEIDGLIPPPRVEIYTLSTDSWREIKNNSLETDTTCFFP 219