BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012399
         (999 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272768.1| PREDICTED: transcription elongation factor A...   323   3e-86
emb|CBI18026.3| unnamed protein product [Vitis vinifera]              316   5e-84
ref|XP_002323085.1| predicted protein [Populus trichocarpa] gi|2...   311   1e-82
ref|XP_002308256.1| predicted protein [Populus trichocarpa] gi|2...   311   2e-82
ref|XP_004160740.1| PREDICTED: transcription elongation factor A...   300   4e-79

>ref|XP_002272768.1| PREDICTED: transcription elongation factor A protein 3 [Vitis
           vinifera]
          Length = 367

 Score =  323 bits (829), Expect = 3e-86
 Identities = 159/227 (70%), Positives = 183/227 (80%)
 Frame = -1

Query: 996 KSEKVSRSETVKVEKIGGVEPMKVDRMPXXXXXXXXXXKVQAPKGPPKLTSMVKCNDSNR 817
           K   VSRSET+KVEK       +V+ +             QA  GPPKLT+M+KCND+ R
Sbjct: 148 KPGSVSRSETIKVEK-------RVENVDERKQFSSVKKPPQASNGPPKLTAMIKCNDALR 200

Query: 816 DKIRELLAEAFSRVCKEADEDMLDEVNALDPIRVAVSVESVLFEKMGRQTGPQKSKYRSI 637
           DK+RELLAEA  +V  EADED+ DEVNA DPIRVAVSVESV+FEKMGR  G QK KYRSI
Sbjct: 201 DKVRELLAEALFKVASEADEDIKDEVNACDPIRVAVSVESVMFEKMGRSNGTQKFKYRSI 260

Query: 636 MFNIRDENNPDLRRRVLLGHVKPEKLINMTAAEMASDKRKQENNQIQEKAMFDCEREAAP 457
           MFNI+D NNPDLRR+VLLG VKP++LINM+  EMAS++R++EN+QI+EKA+FDCER   P
Sbjct: 261 MFNIKDPNNPDLRRKVLLGEVKPDRLINMSPEEMASNQRQRENSQIKEKALFDCERGGPP 320

Query: 456 KATTDQFRCGRCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 316
           KATTDQF+CGRCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWKFC
Sbjct: 321 KATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 367


>emb|CBI18026.3| unnamed protein product [Vitis vinifera]
          Length = 322

 Score =  316 bits (810), Expect = 5e-84
 Identities = 155/227 (68%), Positives = 181/227 (79%)
 Frame = -1

Query: 996 KSEKVSRSETVKVEKIGGVEPMKVDRMPXXXXXXXXXXKVQAPKGPPKLTSMVKCNDSNR 817
           K+EK S+ ETV+          +V+ +             QA  GPPKLT+M+KCND+ R
Sbjct: 105 KAEKASKVETVE---------KRVENVDERKQFSSVKKPPQASNGPPKLTAMIKCNDALR 155

Query: 816 DKIRELLAEAFSRVCKEADEDMLDEVNALDPIRVAVSVESVLFEKMGRQTGPQKSKYRSI 637
           DK+RELLAEA  +V  EADED+ DEVNA DPIRVAVSVESV+FEKMGR  G QK KYRSI
Sbjct: 156 DKVRELLAEALFKVASEADEDIKDEVNACDPIRVAVSVESVMFEKMGRSNGTQKFKYRSI 215

Query: 636 MFNIRDENNPDLRRRVLLGHVKPEKLINMTAAEMASDKRKQENNQIQEKAMFDCEREAAP 457
           MFNI+D NNPDLRR+VLLG VKP++LINM+  EMAS++R++EN+QI+EKA+FDCER   P
Sbjct: 216 MFNIKDPNNPDLRRKVLLGEVKPDRLINMSPEEMASNQRQRENSQIKEKALFDCERGGPP 275

Query: 456 KATTDQFRCGRCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 316
           KATTDQF+CGRCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWKFC
Sbjct: 276 KATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 322


>ref|XP_002323085.1| predicted protein [Populus trichocarpa] gi|222867715|gb|EEF04846.1|
           predicted protein [Populus trichocarpa]
          Length = 334

 Score =  311 bits (798), Expect = 1e-82
 Identities = 153/225 (68%), Positives = 180/225 (80%), Gaps = 1/225 (0%)
 Frame = -1

Query: 987 KVSRSETVKVEKIGGVEPMKVDRM-PXXXXXXXXXXKVQAPKGPPKLTSMVKCNDSNRDK 811
           KVS SETVKVEK+   + +KV +               QAP GPPKL ++VKCND+ RDK
Sbjct: 110 KVSTSETVKVEKMDQDKTVKVAQTCKEEIQTSSVKKPSQAPTGPPKLKTLVKCNDALRDK 169

Query: 810 IRELLAEAFSRVCKEADEDMLDEVNALDPIRVAVSVESVLFEKMGRQTGPQKSKYRSIMF 631
           IRELLAEA S+V  EADED+ DEV A DPIRVAVSVES +FEK+GR  G QK KYRSIMF
Sbjct: 170 IRELLAEALSKVASEADEDIRDEVEACDPIRVAVSVESAMFEKLGRSNGAQKMKYRSIMF 229

Query: 630 NIRDENNPDLRRRVLLGHVKPEKLINMTAAEMASDKRKQENNQIQEKAMFDCEREAAPKA 451
           NI+D+NNPDLRR+VLLG V+P++L+ M   EMAS++RK+ENNQI+EKA+FDCER    +A
Sbjct: 230 NIKDQNNPDLRRKVLLGQVQPQRLVTMPPEEMASEQRKRENNQIKEKALFDCERGGKAEA 289

Query: 450 TTDQFRCGRCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 316
           TTDQF+CGRCGQRK TYYQ+QTRSADEPMTT+VTCVNCNNHWKFC
Sbjct: 290 TTDQFKCGRCGQRKCTYYQMQTRSADEPMTTYVTCVNCNNHWKFC 334


>ref|XP_002308256.1| predicted protein [Populus trichocarpa] gi|222854232|gb|EEE91779.1|
           predicted protein [Populus trichocarpa]
          Length = 352

 Score =  311 bits (796), Expect = 2e-82
 Identities = 151/229 (65%), Positives = 183/229 (79%), Gaps = 1/229 (0%)
 Frame = -1

Query: 999 IKSEKVSRSETVKVEKIGGVEPMKVDRMPXXXXXXXXXXKV-QAPKGPPKLTSMVKCNDS 823
           +K E+ S SETVKVEK+   + +KV++M           +  Q+P GPPKL ++VKCND+
Sbjct: 124 VKVERASTSETVKVEKMDQDKTVKVEKMSKQEIQTSSVKQPSQSPIGPPKLKTLVKCNDA 183

Query: 822 NRDKIRELLAEAFSRVCKEADEDMLDEVNALDPIRVAVSVESVLFEKMGRQTGPQKSKYR 643
            RDKIRELLAEA S+V  EADED+ DEV A DPIRVAVSVES++FEK+GR  G QK KYR
Sbjct: 184 LRDKIRELLAEALSKVASEADEDIRDEVEACDPIRVAVSVESMMFEKLGRSNGAQKLKYR 243

Query: 642 SIMFNIRDENNPDLRRRVLLGHVKPEKLINMTAAEMASDKRKQENNQIQEKAMFDCEREA 463
           SIMFNI+D+NNPD RR+VLLG V+PE+L+ M   EMAS++RK+ENNQI+EK +FDCER  
Sbjct: 244 SIMFNIKDQNNPDFRRKVLLGEVQPERLVTMGPEEMASEQRKRENNQIKEKVLFDCERSG 303

Query: 462 APKATTDQFRCGRCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 316
             +ATTDQF+CGRC QRK TYYQ+QTRSADEPMTT+VTCVNCNNHWKFC
Sbjct: 304 QAQATTDQFKCGRCRQRKCTYYQMQTRSADEPMTTYVTCVNCNNHWKFC 352


>ref|XP_004160740.1| PREDICTED: transcription elongation factor A protein 2-like
           [Cucumis sativus]
          Length = 290

 Score =  300 bits (768), Expect = 4e-79
 Identities = 152/228 (66%), Positives = 178/228 (78%), Gaps = 1/228 (0%)
 Frame = -1

Query: 996 KSEKV-SRSETVKVEKIGGVEPMKVDRMPXXXXXXXXXXKVQAPKGPPKLTSMVKCNDSN 820
           KSE V S   +VKVEK   +  +KV+R+                  PPKLTSM+K  D+ 
Sbjct: 70  KSESVVSERNSVKVEKTDSM--VKVERVVKEEKKPS-----SGAAAPPKLTSMIKSKDAA 122

Query: 819 RDKIRELLAEAFSRVCKEADEDMLDEVNALDPIRVAVSVESVLFEKMGRQTGPQKSKYRS 640
           RDKIRELL EAFS+V  EADE+ +DEVNA DPIRVAVSVESV+FE  G  TG QK+KYRS
Sbjct: 123 RDKIRELLFEAFSKVPGEADEEFMDEVNASDPIRVAVSVESVMFENWGGSTGAQKAKYRS 182

Query: 639 IMFNIRDENNPDLRRRVLLGHVKPEKLINMTAAEMASDKRKQENNQIQEKAMFDCEREAA 460
           IMFN++D  NPD RR+VLLG +KPE++INM+ A+MASD+RK+EN +I +KA+FDCER  A
Sbjct: 183 IMFNLKDPKNPDFRRKVLLGLIKPERMINMSTADMASDQRKRENEEIAQKALFDCERGGA 242

Query: 459 PKATTDQFRCGRCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 316
           PKATTDQF+CGRCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWKFC
Sbjct: 243 PKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 290