BLASTX nr result

ID: Coptis21_contig00012391 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012391
         (764 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283723.1| PREDICTED: probable calcium-binding protein ...   153   3e-35
ref|XP_002323865.1| predicted protein [Populus trichocarpa] gi|2...   141   1e-31
ref|XP_003612498.1| Calcium-binding protein CML42 [Medicago trun...   140   4e-31
ref|XP_003621252.1| Calcium-binding protein CML42 [Medicago trun...   139   5e-31
gb|AFK49407.1| unknown [Medicago truncatula]                          134   2e-29

>ref|XP_002283723.1| PREDICTED: probable calcium-binding protein CML45 [Vitis vinifera]
           gi|296082935|emb|CBI22236.3| unnamed protein product
           [Vitis vinifera]
          Length = 198

 Score =  153 bits (387), Expect = 3e-35
 Identities = 85/194 (43%), Positives = 120/194 (61%), Gaps = 1/194 (0%)
 Frame = +2

Query: 134 EKTSSNTLSPFSLAGLIWFLL-FDGVLNWVIGFKKFYSSSRCFFQSLAEFFVGKSKGGSE 310
           E++S   + PF  + ++  +L F+ +  WV   + F+S S  FFQS   FF   ++  +E
Sbjct: 3   ERSSPEMIQPFFSSSILDDILRFEVICLWVTIIQGFFSRSMSFFQSQFSFFCN-TELWAE 61

Query: 311 KKIANSELLKHKLSVKEKVEDGKLSREDVEMVMGNLRIVCNPDEDKLRERLGSHELSVLF 490
           +K  + E+    LS   KV+D  L RED+E VM  L I CNP+ +KL+ERL   EL+ LF
Sbjct: 62  RKSQDFEVPSRPLSQNVKVDDRSLCREDMETVMERLGICCNPEGEKLQERLRPEELAGLF 121

Query: 491 XXXXXXXXXXXXAFDIFDENRDGFVDASELQRVICSLGFKEGSKLVECETMIRAFDENRD 670
                       AF +FD NRDGF+DA ELQRV+ +LGF++G+ + +C+ MI + DENRD
Sbjct: 122 EEKEPSLEELKEAFLVFDANRDGFIDAKELQRVLLNLGFRQGTGIEDCKKMISSHDENRD 181

Query: 671 GKIDFNEFVKLMEN 712
           G+IDFNEFVK  EN
Sbjct: 182 GRIDFNEFVKFTEN 195


>ref|XP_002323865.1| predicted protein [Populus trichocarpa] gi|222866867|gb|EEF03998.1|
           predicted protein [Populus trichocarpa]
          Length = 212

 Score =  141 bits (356), Expect = 1e-31
 Identities = 84/209 (40%), Positives = 121/209 (57%), Gaps = 7/209 (3%)
 Frame = +2

Query: 116 SQYFTMEKTSSNTLSPFS-LAGLIWFLLFDGVLNWVIGFKKFYSSSRCFFQSLAEFFVGK 292
           S    ++K SSN    FS L  ++  +L + + +     +KF +    F QS  +  +G 
Sbjct: 8   SSLVILQKESSNANQSFSPLFTMVHLVLSELIFSRFSNLQKFLARFWFFLQS--QLGLGN 65

Query: 293 SK------GGSEKKIANSELLKHKLSVKEKVEDGKLSREDVEMVMGNLRIVCNPDEDKLR 454
           S+      G  + ++  S+  +      ++ ++  + REDVEMVM NL + C+ + ++L+
Sbjct: 66  SELWEDDDGNQDSEL--SKQTQESCFDNKRPDERSICREDVEMVMENLGLFCSSESEELK 123

Query: 455 ERLGSHELSVLFXXXXXXXXXXXXAFDIFDENRDGFVDASELQRVICSLGFKEGSKLVEC 634
           E +GS E+S LF            AF++FD NRDGFVDASELQRV   LG KEG +L +C
Sbjct: 124 EWMGSDEISQLFDEKEPSLEEVKEAFNVFDHNRDGFVDASELQRVFYKLGLKEGLQLEKC 183

Query: 635 ETMIRAFDENRDGKIDFNEFVKLMENSFC 721
             +IR FDEN DG+IDFNEFVK MENSFC
Sbjct: 184 RKIIRTFDENGDGRIDFNEFVKFMENSFC 212


>ref|XP_003612498.1| Calcium-binding protein CML42 [Medicago truncatula]
           gi|355513833|gb|AES95456.1| Calcium-binding protein
           CML42 [Medicago truncatula]
          Length = 200

 Score =  140 bits (352), Expect = 4e-31
 Identities = 79/198 (39%), Positives = 115/198 (58%)
 Frame = +2

Query: 128 TMEKTSSNTLSPFSLAGLIWFLLFDGVLNWVIGFKKFYSSSRCFFQSLAEFFVGKSKGGS 307
           T +   SN+ S  +  GLI F ++  +    I  +KF+S+   +F  L +   G  +   
Sbjct: 15  TSQNDDSNSTSCSTFFGLIDFFIYSTLF---IRIQKFFSTF--WFFLLCQLRSGDYEVKG 69

Query: 308 EKKIANSELLKHKLSVKEKVEDGKLSREDVEMVMGNLRIVCNPDEDKLRERLGSHELSVL 487
           EK++  +E    +       E G++ R +VE VM  + I C+ + D+L E+ GS+ELS L
Sbjct: 70  EKQVLETESNVSR-------ESGEIKRVEVETVMAKMGIFCSSESDELDEKYGSNELSEL 122

Query: 488 FXXXXXXXXXXXXAFDIFDENRDGFVDASELQRVICSLGFKEGSKLVECETMIRAFDENR 667
           F            AFD+FDEN+DGF+DA ELQRV+C LG  EG ++  C+ MI+ FDEN+
Sbjct: 123 FDENEPSLEEVKMAFDVFDENKDGFIDAKELQRVMCILGLNEGLEVKNCQKMIKNFDENQ 182

Query: 668 DGKIDFNEFVKLMENSFC 721
           DG+IDF EFVK+MEN  C
Sbjct: 183 DGRIDFTEFVKIMENRLC 200


>ref|XP_003621252.1| Calcium-binding protein CML42 [Medicago truncatula]
           gi|355496267|gb|AES77470.1| Calcium-binding protein
           CML42 [Medicago truncatula]
          Length = 202

 Score =  139 bits (351), Expect = 5e-31
 Identities = 80/196 (40%), Positives = 115/196 (58%)
 Frame = +2

Query: 134 EKTSSNTLSPFSLAGLIWFLLFDGVLNWVIGFKKFYSSSRCFFQSLAEFFVGKSKGGSEK 313
           E T  N  S  +L GLI F ++     + I   KF+SS   +F    +   G  +   +K
Sbjct: 13  ENTLQNDESNSTLFGLIDFFMYS---MFFIRIHKFFSSF--WFFLFCQLRSGDLEVKGKK 67

Query: 314 KIANSELLKHKLSVKEKVEDGKLSREDVEMVMGNLRIVCNPDEDKLRERLGSHELSVLFX 493
           +++ +EL   + S     E G++ R +VE VM N+ + C+ + D+L E+  S E S LF 
Sbjct: 68  QLSETELNVSRDS-NVSGESGEIKRNEVETVMANMGLFCSSESDELEEKYSSKEFSELFD 126

Query: 494 XXXXXXXXXXXAFDIFDENRDGFVDASELQRVICSLGFKEGSKLVECETMIRAFDENRDG 673
                      AFD+FDEN+DGF+DA EL+RV+C LGFKEGS++  C+ MI+ FD N+DG
Sbjct: 127 ENEPSLEEVKMAFDVFDENKDGFIDAMELKRVMCILGFKEGSEVENCQKMIKNFDANQDG 186

Query: 674 KIDFNEFVKLMENSFC 721
           +IDF EFVK+MEN  C
Sbjct: 187 RIDFIEFVKIMENRLC 202


>gb|AFK49407.1| unknown [Medicago truncatula]
          Length = 170

 Score =  134 bits (338), Expect = 2e-29
 Identities = 69/169 (40%), Positives = 99/169 (58%), Gaps = 4/169 (2%)
 Frame = +2

Query: 227 FKKFYSSSRCFFQSLAEFFVGKSKGGSEKKIANSELLKHKLSVKEKV----EDGKLSRED 394
           +  F+     FF S   F   + + G  +     +L + +L+V        E G++ R +
Sbjct: 2   YSMFFIRIHKFFSSFWFFLFCQLRSGDLEVKGKKQLSETELNVSRDSNVSGESGEIKRNE 61

Query: 395 VEMVMGNLRIVCNPDEDKLRERLGSHELSVLFXXXXXXXXXXXXAFDIFDENRDGFVDAS 574
           VE VM N+ + C+ + D+L E+  S E S LF            AFD+FDEN+DGF+DA 
Sbjct: 62  VETVMANMGLFCSSESDELEEKYSSKEFSELFDENEPSLEEVKMAFDVFDENKDGFIDAM 121

Query: 575 ELQRVICSLGFKEGSKLVECETMIRAFDENRDGKIDFNEFVKLMENSFC 721
           EL+RV+C LGFKEGS++  C+ MI+ FD N+DG+IDF EFVK+MEN  C
Sbjct: 122 ELKRVMCILGFKEGSEVENCQKMIKNFDANQDGRIDFIEFVKIMENRLC 170


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