BLASTX nr result

ID: Coptis21_contig00012388 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012388
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL58207.1|AC090882_10 putative GTP-binding protein [Oryza sa...    69   3e-10
gb|ACN34672.1| unknown [Zea mays] gi|413933270|gb|AFW67821.1| dy...    69   4e-10
ref|NP_001151519.1| dynamin-related protein 1C [Zea mays] gi|195...    69   4e-10
ref|NP_001147100.1| dynamin-related protein 1C [Zea mays] gi|195...    69   4e-10
gb|AFW67820.1| hypothetical protein ZEAMMB73_384674 [Zea mays]         67   2e-09

>gb|AAL58207.1|AC090882_10 putative GTP-binding protein [Oryza sativa Japonica Group]
           gi|108710736|gb|ABF98531.1| Dynamin-related protein 1C,
           putative, expressed [Oryza sativa Japonica Group]
           gi|215769458|dbj|BAH01687.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218193636|gb|EEC76063.1| hypothetical protein
           OsI_13267 [Oryza sativa Indica Group]
           gi|222625676|gb|EEE59808.1| hypothetical protein
           OsJ_12333 [Oryza sativa Japonica Group]
          Length = 611

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 34/42 (80%), Positives = 38/42 (90%)
 Frame = +3

Query: 24  QKKQLSAMLDEDLALMEKRETLANRLALYKSARDEIDSVAWK 149
           +KKQLSAMLDED ALMEKR++L  RL LYKSAR+EIDSVAWK
Sbjct: 570 EKKQLSAMLDEDPALMEKRDSLVKRLELYKSARNEIDSVAWK 611


>gb|ACN34672.1| unknown [Zea mays] gi|413933270|gb|AFW67821.1| dynamin protein 1C
           [Zea mays]
          Length = 611

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 34/42 (80%), Positives = 37/42 (88%)
 Frame = +3

Query: 24  QKKQLSAMLDEDLALMEKRETLANRLALYKSARDEIDSVAWK 149
           +KKQLSAMLDED ALMEKR+ L  RL LYKSAR+EIDSVAWK
Sbjct: 570 EKKQLSAMLDEDPALMEKRDALVKRLELYKSARNEIDSVAWK 611


>ref|NP_001151519.1| dynamin-related protein 1C [Zea mays] gi|195647378|gb|ACG43157.1|
           dynamin-related protein 1C [Zea mays]
          Length = 611

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 34/42 (80%), Positives = 37/42 (88%)
 Frame = +3

Query: 24  QKKQLSAMLDEDLALMEKRETLANRLALYKSARDEIDSVAWK 149
           +KKQLSAMLDED ALMEKR+ L  RL LYKSAR+EIDSVAWK
Sbjct: 570 EKKQLSAMLDEDPALMEKRDALVKRLELYKSARNEIDSVAWK 611


>ref|NP_001147100.1| dynamin-related protein 1C [Zea mays] gi|195607202|gb|ACG25431.1|
           dynamin-related protein 1C [Zea mays]
           gi|219884353|gb|ACL52551.1| unknown [Zea mays]
           gi|219888263|gb|ACL54506.1| unknown [Zea mays]
           gi|414872448|tpg|DAA51005.1| TPA: dynamin protein 1C
           isoform 1 [Zea mays] gi|414872449|tpg|DAA51006.1| TPA:
           dynamin protein 1C isoform 2 [Zea mays]
          Length = 611

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 34/42 (80%), Positives = 37/42 (88%)
 Frame = +3

Query: 24  QKKQLSAMLDEDLALMEKRETLANRLALYKSARDEIDSVAWK 149
           +KKQLSAMLDED ALMEKR+ L  RL LYKSAR+EIDSVAWK
Sbjct: 570 EKKQLSAMLDEDPALMEKRDALVKRLELYKSARNEIDSVAWK 611


>gb|AFW67820.1| hypothetical protein ZEAMMB73_384674 [Zea mays]
          Length = 610

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 33/42 (78%), Positives = 37/42 (88%)
 Frame = +3

Query: 24  QKKQLSAMLDEDLALMEKRETLANRLALYKSARDEIDSVAWK 149
           ++KQLSAMLDED ALMEKR+ L  RL LYKSAR+EIDSVAWK
Sbjct: 569 KEKQLSAMLDEDPALMEKRDALVKRLELYKSARNEIDSVAWK 610


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