BLASTX nr result
ID: Coptis21_contig00012374
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00012374
(936 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002522480.1| conserved hypothetical protein [Ricinus comm... 167 2e-71
ref|XP_002315033.1| predicted protein [Populus trichocarpa] gi|2... 164 3e-69
ref|XP_002312261.1| predicted protein [Populus trichocarpa] gi|2... 157 2e-68
ref|XP_003613885.1| DUF246 domain-containing protein [Medicago t... 164 6e-68
gb|AAD39288.1|AC007576_11 Similar to auxin-independent growth pr... 164 3e-67
>ref|XP_002522480.1| conserved hypothetical protein [Ricinus communis]
gi|223538365|gb|EEF39972.1| conserved hypothetical
protein [Ricinus communis]
Length = 520
Score = 167 bits (423), Expect(2) = 2e-71
Identities = 80/111 (72%), Positives = 93/111 (83%)
Frame = +2
Query: 278 KNHSSQMAALGFTVSVASNIFIPTYDENMAKLVEGHRRYHGFRKTIVPDRGKLVELIDLY 457
+NHSSQMAAL F VS+ASN FIPTYD NMAK+VEGHRRY GF+KTI+ DR KLVEL+DL+
Sbjct: 379 QNHSSQMAALDFMVSIASNTFIPTYDGNMAKVVEGHRRYLGFKKTILLDRKKLVELLDLH 438
Query: 458 HNKTLSWNEFEVAVRLAHGKRLGMPSPQKVILDNPKEEEYFYANPHECLSE 610
N TL+WN+F VAV+ AH KR+G PS +KVI D PKEE+YFYANP ECL E
Sbjct: 439 QNGTLTWNKFAVAVQAAHEKRMGQPSRRKVIADKPKEEDYFYANPQECLCE 489
Score = 129 bits (323), Expect(2) = 2e-71
Identities = 65/94 (69%), Positives = 74/94 (78%)
Frame = +1
Query: 1 RYAHPWWREKELVSEERRSQGMYPLTPEETALVLQALGFGKNTHIYIASGEIYGSERRLM 180
RYA+PWWREKE+VSEERRSQG+ PLTPEETAL+LQALGF K T IYIA+GEIYGSE RL
Sbjct: 295 RYAYPWWREKEIVSEERRSQGLCPLTPEETALILQALGFDKETQIYIAAGEIYGSESRLA 354
Query: 181 ALRATFP*LVNL*TFIMFNQVKKEMLLDPGDLQK 282
ALRA FP + V+KEMLLDP +LQ+
Sbjct: 355 ALRAAFPLI-----------VRKEMLLDPAELQQ 377
>ref|XP_002315033.1| predicted protein [Populus trichocarpa] gi|222864073|gb|EEF01204.1|
predicted protein [Populus trichocarpa]
Length = 500
Score = 164 bits (415), Expect(2) = 3e-69
Identities = 78/111 (70%), Positives = 92/111 (82%)
Frame = +2
Query: 278 KNHSSQMAALGFTVSVASNIFIPTYDENMAKLVEGHRRYHGFRKTIVPDRGKLVELIDLY 457
+NHSSQMAAL F VS+AS+ FIPTYD NMAK+VEGHRRY GF+KTI+ DR +LVEL+DL+
Sbjct: 378 QNHSSQMAALDFMVSIASDTFIPTYDGNMAKVVEGHRRYRGFKKTILLDRKRLVELLDLH 437
Query: 458 HNKTLSWNEFEVAVRLAHGKRLGMPSPQKVILDNPKEEEYFYANPHECLSE 610
N TLSWNEF VAV AH KR+G P+ ++VI D PKEE+YFYANP ECL E
Sbjct: 438 QNGTLSWNEFAVAVGSAHEKRMGQPTRRRVIADKPKEEDYFYANPQECLCE 488
Score = 124 bits (312), Expect(2) = 3e-69
Identities = 62/94 (65%), Positives = 74/94 (78%)
Frame = +1
Query: 1 RYAHPWWREKELVSEERRSQGMYPLTPEETALVLQALGFGKNTHIYIASGEIYGSERRLM 180
RYA+PWWREKE+VS+ERRSQG+ PLTPEETAL+L ALGF K+T IYIA+GEIYGSERRL
Sbjct: 294 RYAYPWWREKEIVSKERRSQGLCPLTPEETALILLALGFDKDTQIYIAAGEIYGSERRLA 353
Query: 181 ALRATFP*LVNL*TFIMFNQVKKEMLLDPGDLQK 282
L A +P + V+KEMLLDPG+LQ+
Sbjct: 354 VLSAAYPRI-----------VRKEMLLDPGELQQ 376
>ref|XP_002312261.1| predicted protein [Populus trichocarpa] gi|222852081|gb|EEE89628.1|
predicted protein [Populus trichocarpa]
Length = 493
Score = 157 bits (398), Expect(2) = 2e-68
Identities = 75/111 (67%), Positives = 91/111 (81%)
Frame = +2
Query: 278 KNHSSQMAALGFTVSVASNIFIPTYDENMAKLVEGHRRYHGFRKTIVPDRGKLVELIDLY 457
+NHSSQMAAL F VS+AS+ FIPTYD NMAK+VEGHRRY GF+KT++ DR +LVEL+DL+
Sbjct: 366 QNHSSQMAALDFMVSIASDTFIPTYDGNMAKVVEGHRRYLGFKKTVLLDRKRLVELMDLH 425
Query: 458 HNKTLSWNEFEVAVRLAHGKRLGMPSPQKVILDNPKEEEYFYANPHECLSE 610
TL+WNEF AVR AH KR+G P+ ++VI D PKEE+YFYANP ECL E
Sbjct: 426 QIGTLTWNEFVFAVRSAHEKRMGKPTRRRVIADKPKEEDYFYANPQECLCE 476
Score = 128 bits (322), Expect(2) = 2e-68
Identities = 64/94 (68%), Positives = 74/94 (78%)
Frame = +1
Query: 1 RYAHPWWREKELVSEERRSQGMYPLTPEETALVLQALGFGKNTHIYIASGEIYGSERRLM 180
RYA+PWWREKE+VSEERRSQG+ PLTPEETAL+LQALGF K+T IYIA+GEIYGSERRL
Sbjct: 282 RYAYPWWREKEIVSEERRSQGLCPLTPEETALILQALGFDKDTQIYIAAGEIYGSERRLA 341
Query: 181 ALRATFP*LVNL*TFIMFNQVKKEMLLDPGDLQK 282
LRA +P V+KEMLLD G+LQ+
Sbjct: 342 VLRAAYP-----------RTVRKEMLLDSGELQQ 364
>ref|XP_003613885.1| DUF246 domain-containing protein [Medicago truncatula]
gi|355515220|gb|AES96843.1| DUF246 domain-containing
protein [Medicago truncatula]
Length = 494
Score = 164 bits (416), Expect(2) = 6e-68
Identities = 77/111 (69%), Positives = 91/111 (81%)
Frame = +2
Query: 278 KNHSSQMAALGFTVSVASNIFIPTYDENMAKLVEGHRRYHGFRKTIVPDRGKLVELIDLY 457
+NHSSQMAAL F VSVAS+ FIPTYD NMAKLVEGHRRY FRKTI+ DR K+VEL+D++
Sbjct: 368 QNHSSQMAALDFMVSVASDTFIPTYDGNMAKLVEGHRRYSDFRKTILLDRKKVVELVDMH 427
Query: 458 HNKTLSWNEFEVAVRLAHGKRLGMPSPQKVILDNPKEEEYFYANPHECLSE 610
HN TL W+EF V+ H KR+G P+ +KVI+D PKEE+YFYANPHECL E
Sbjct: 428 HNGTLKWHEFADGVKQVHEKRIGQPTQRKVIIDKPKEEDYFYANPHECLCE 478
Score = 120 bits (300), Expect(2) = 6e-68
Identities = 62/94 (65%), Positives = 70/94 (74%)
Frame = +1
Query: 1 RYAHPWWREKELVSEERRSQGMYPLTPEETALVLQALGFGKNTHIYIASGEIYGSERRLM 180
RYA PWWREKE++SEERRSQG+ PLTPEE ALVL+ALGFG+ T IYIA+GEIYG ERRL
Sbjct: 284 RYAFPWWREKEIISEERRSQGLCPLTPEEAALVLRALGFGRETPIYIAAGEIYGGERRLA 343
Query: 181 ALRATFP*LVNL*TFIMFNQVKKEMLLDPGDLQK 282
LRA FP + VKKEMLL DLQ+
Sbjct: 344 QLRAAFPQI-----------VKKEMLLTRDDLQQ 366
>gb|AAD39288.1|AC007576_11 Similar to auxin-independent growth promoter protein [Arabidopsis
thaliana]
Length = 509
Score = 164 bits (414), Expect(2) = 3e-67
Identities = 77/111 (69%), Positives = 94/111 (84%)
Frame = +2
Query: 278 KNHSSQMAALGFTVSVASNIFIPTYDENMAKLVEGHRRYHGFRKTIVPDRGKLVELIDLY 457
+NHSSQMAAL F VSVASN FIPTYD NMAK+VEGHRRY G++KTI+ DR +LVEL+DL+
Sbjct: 384 QNHSSQMAALDFMVSVASNTFIPTYDGNMAKVVEGHRRYLGYKKTILLDRKRLVELLDLH 443
Query: 458 HNKTLSWNEFEVAVRLAHGKRLGMPSPQKVILDNPKEEEYFYANPHECLSE 610
HNKTL+W++F VAV+ AH +R G P+ ++VI D PKEE+YFYANP ECL E
Sbjct: 444 HNKTLTWDQFAVAVKEAHERRAGAPTHRRVISDKPKEEDYFYANPQECLCE 494
Score = 118 bits (296), Expect(2) = 3e-67
Identities = 60/94 (63%), Positives = 70/94 (74%)
Frame = +1
Query: 1 RYAHPWWREKELVSEERRSQGMYPLTPEETALVLQALGFGKNTHIYIASGEIYGSERRLM 180
RY +PWWREKE+VSEERR+QG+ PLTPEE ALVL+ALGF KNT IYIA+GEIYGSE RL
Sbjct: 300 RYTYPWWREKEIVSEERRAQGLCPLTPEEVALVLKALGFEKNTQIYIAAGEIYGSEHRLS 359
Query: 181 ALRATFP*LVNL*TFIMFNQVKKEMLLDPGDLQK 282
LR FP + VKKEMLL+ +LQ+
Sbjct: 360 VLREAFPRI-----------VKKEMLLESAELQQ 382