BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012370
         (2959 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272675.1| PREDICTED: transducin beta-like protein 3-li...  1261   0.0  
ref|XP_002520064.1| U3 small nucleolar RNA-associated protein, p...  1229   0.0  
emb|CBI26489.3| unnamed protein product [Vitis vinifera]             1199   0.0  
ref|XP_002873790.1| hypothetical protein ARALYDRAFT_909661 [Arab...  1159   0.0  
ref|NP_568338.2| transducin/WD40 domain-containing protein [Arab...  1159   0.0  

>ref|XP_002272675.1| PREDICTED: transducin beta-like protein 3-like [Vitis vinifera]
          Length = 887

 Score = 1261 bits (3263), Expect = 0.0
 Identities = 621/882 (70%), Positives = 718/882 (81%), Gaps = 11/882 (1%)
 Frame = +2

Query: 101  MKKSYRCTPSLQQFYTGGPFTVSSDGSFLVCACEDTIKIVDSSNASIKSTIQGDSQAVTC 280
            +KK+YR TP+LQQFYTGGPF V+SDGSF+VCAC+D IKIVDSSNASI+S ++GDSQ VT 
Sbjct: 6    LKKNYRSTPALQQFYTGGPFAVASDGSFIVCACDDAIKIVDSSNASIRSVVEGDSQTVTA 65

Query: 281  LTLSPNDHFLFSASHSRQIIVWDISTSKLLRSWKGHEGPVMGMVCDASGGLLATAGADRK 460
            L LSP+D  LFS+SHSRQI VW++S+ K +RSWKGHEGPVMGM CDASGG+LATAGADRK
Sbjct: 66   LALSPDDRLLFSSSHSRQIRVWELSSLKCIRSWKGHEGPVMGMACDASGGVLATAGADRK 125

Query: 461  VLVWDVDGGFCTHYFKGHKGVVTSIMFHPDPNRLLLFSGSDDATVRVWDLVSKKCVAVLE 640
            VLVWDVDGG+CTHYFKGHKGVVTSI+FHPD NRLLL SGSDDATVRVWDL+SKKCVA LE
Sbjct: 126  VLVWDVDGGYCTHYFKGHKGVVTSIIFHPDVNRLLLVSGSDDATVRVWDLMSKKCVATLE 185

Query: 641  KHFSTVTSLAVSENGCTLLSAGRDKVVNLWDLHNFDFRMTLPTYEVLEAVLVISPRSRLA 820
            +HFS VTSLAVSE+G TLLSAGRDKVVNLWDLH++  ++T+PTYEVLE V VI  +S  A
Sbjct: 186  RHFSAVTSLAVSEDGWTLLSAGRDKVVNLWDLHDYSCKLTVPTYEVLEGVCVIHSKSPFA 245

Query: 821  DCLGFSEQLSGKKKKIWSPPIYFLTVGERGLIRIWNSESAHCLLEQQSSDITLSSDGDEV 1000
              L   ++  G+KKK  SP IYF+TVGERG +RIWNSE A CL EQQSSD+T+SSD D+ 
Sbjct: 246  SSLDSYKRQKGRKKKSESPAIYFITVGERGTVRIWNSEGAVCLFEQQSSDVTVSSDSDDS 305

Query: 1001 KRGFTSAVMLPSDQGLLCVTADQQFLLYSPTQSLEDAFKLKLRKRLVGYNEEIVDMKFVG 1180
            KRGFT+A +LP DQGLLCVT DQQFL YS     E+  KL L KRLVGYNEEIVDMKF+G
Sbjct: 306  KRGFTAATILPLDQGLLCVTVDQQFLFYSTLTHSEEMLKLMLSKRLVGYNEEIVDMKFLG 365

Query: 1181 EDEQFLAMATNLEQVRVYDLASMSCCYVLLGHTDSVLCLDTCISSAGRNLLVTGSKDSRV 1360
            EDEQFLA+ATNLEQV+VYDLASMSC YVL GHT  VLCLDTC+SS+GR  +VTGSKD+ V
Sbjct: 366  EDEQFLAVATNLEQVQVYDLASMSCSYVLSGHTGIVLCLDTCVSSSGRTFVVTGSKDNSV 425

Query: 1361 RLWDHEGQCCIGVGTGHLKDVGAVAFSKKQRNFIVSGSRDETLKIWSLDGVSEDGNRTIN 1540
            RLW+ E +CCIGVGTGH   VGAVAFSKK RNF VSGS D TLK+WSLDG+S+D  + I+
Sbjct: 426  RLWESESRCCIGVGTGHTGAVGAVAFSKKLRNFFVSGSSDRTLKVWSLDGLSDDTEQPIS 485

Query: 1541 LKAKAAVAAHKGDINCLAVAPNDSYVCSGSQDKTASIWRLPDLVYVVTLKGHKRGIWSVE 1720
            LKAKA VAAH  DIN LAVAPNDS VCSGSQD+TA +WRLPDLV VV LKGHKRG+WSVE
Sbjct: 486  LKAKAVVAAHDKDINSLAVAPNDSLVCSGSQDRTACVWRLPDLVSVVVLKGHKRGVWSVE 545

Query: 1721 FSPVDQCVITASGDKTIKIWSISDGSCLKTFEGHTSRVLRASYISRGTQFVSCGADGLLK 1900
            FSPVDQCV+TASGDKTIKIW+ISDGSCLKTFEGHTS VLRAS+++RGTQ VSCGADGL+K
Sbjct: 546  FSPVDQCVMTASGDKTIKIWAISDGSCLKTFEGHTSSVLRASFLTRGTQVVSCGADGLVK 605

Query: 1901 LWMVRTSECIATYDQHEDKVWALAVGKKTEMLATGGSDAVVNLWHDSTXXXXXXXXXXXX 2080
            LW ++T+ECIATYDQHEDKVWALAVGKKTEMLATGGSDAVVNLWHDST            
Sbjct: 606  LWTIKTNECIATYDQHEDKVWALAVGKKTEMLATGGSDAVVNLWHDSTASDKEEAFRKEE 665

Query: 2081 XGVLKGQELENAVSDADYARAIRVAFELRRPHKLFDIFLDLCRKKHAEDQIDRALRTLGK 2260
             GVLKGQELENA+SD DY +AI++AFELRRPHKLF++F +L RK+ A +Q+++AL  LGK
Sbjct: 666  EGVLKGQELENALSDTDYTKAIQIAFELRRPHKLFELFSELSRKREAAEQVEKALHALGK 725

Query: 2261 EEIHLLFEYVREWNTKPKLCHIAQSVLFRVFNILSPTEILEIKGVSELLEGLIPYSQRHF 2440
            EE  LL EYVREWNTKPKLCH+AQ VLFRVF++L PTEI E++G+ ELLEG+IPYSQRHF
Sbjct: 726  EEFRLLLEYVREWNTKPKLCHVAQFVLFRVFSMLPPTEITEMRGIGELLEGIIPYSQRHF 785

Query: 2441 SRIDRHIRSTLLLDYTLSSMSVIEPEIEVRAPKEEPLL---LHDEADEPWVKDLSPEQ-- 2605
            SR+DR IR T LLDYTL+ MSVIEPE + +  K+EP     + D  D P  ++   EQ  
Sbjct: 786  SRMDRLIRGTYLLDYTLTGMSVIEPETDAKEIKDEPETWPEVKDSGDWPSPENADEEQEQ 845

Query: 2606 ------EKIXXXXXXXXXXXXXAEKKLRDVGYVDALTLSLRA 2713
                  EK              A+KK+++  Y     +SL+A
Sbjct: 846  TLEGLKEKASSKKRKSRKSRDRAQKKVKETAYTKISAISLQA 887


>ref|XP_002520064.1| U3 small nucleolar RNA-associated protein, putative [Ricinus
            communis] gi|223540828|gb|EEF42388.1| U3 small nucleolar
            RNA-associated protein, putative [Ricinus communis]
          Length = 876

 Score = 1229 bits (3180), Expect = 0.0
 Identities = 601/880 (68%), Positives = 715/880 (81%), Gaps = 9/880 (1%)
 Frame = +2

Query: 101  MKKSYRCTPSLQQFYTGGPFTVSSDGSFLVCACEDTIKIVDSSNASIKSTIQGDSQAVTC 280
            MKK+YRC PS+QQFY+GGPF VSSDGSF+ CAC + IKIVDS+N ++++TI+GD++A T 
Sbjct: 1    MKKNYRCVPSIQQFYSGGPFAVSSDGSFIACACGEAIKIVDSANGAVRATIEGDTEAATA 60

Query: 281  LTLSPNDHFLFSASHSRQIIVWDISTSKLLRSWKGHEGPVMGMVCDASGGLLATAGADRK 460
            LTLSP+D  +FSA HSRQI VWD+ST K +RSWKGHEGPVMGM C ASGGLLATAGADRK
Sbjct: 61   LTLSPDDKLMFSAGHSRQIRVWDLSTMKCVRSWKGHEGPVMGMACHASGGLLATAGADRK 120

Query: 461  VLVWDVDGGFCTHYFKGHKGVVTSIMFHPDPNRLLLFSGSDDATVRVWDLVSKKCVAVLE 640
            VLVWDVDGGFCTH+FKGHKGVV+S+MFHPD N++LLFSGSDDATVRVW+L SKKC+A LE
Sbjct: 121  VLVWDVDGGFCTHFFKGHKGVVSSVMFHPDANKMLLFSGSDDATVRVWNLASKKCIATLE 180

Query: 641  KHFSTVTSLAVSENGCTLLSAGRDKVVNLWDLHNFDFRMTLPTYEVLEAVLVISPRSRLA 820
            +HF+TVTSL VSE+G TLLSAGRDKVVNLWDLH++  ++T+PTYE++E + VI   ++ +
Sbjct: 181  RHFTTVTSLEVSEDGWTLLSAGRDKVVNLWDLHDYTCKITIPTYEIVEDLCVIHSGTQFS 240

Query: 821  DCLGFSEQLSGKKKKIWSPPIYFLTVGERGLIRIWNSESAHCLLEQQSSDITLSSDGDEV 1000
              +G   QLSGK +   S  IYF+TVGERG++RIW SE A CL EQ SSDIT++SD DE 
Sbjct: 241  SLIGSYSQLSGKSRN-GSSAIYFITVGERGIVRIWTSERAVCLYEQNSSDITVTSDTDES 299

Query: 1001 KRGFTSAVMLPSDQGLLCVTADQQFLLYSPTQSLEDAFKLKLRKRLVGYNEEIVDMKFVG 1180
            KRGFT++V+LPSDQG+LCVTADQQFLLY      E+ FKL+L +RL+GYNEEI+DM+F+G
Sbjct: 300  KRGFTASVILPSDQGVLCVTADQQFLLYLAVGHPEEKFKLELNRRLIGYNEEILDMRFLG 359

Query: 1181 EDEQFLAMATNLEQVRVYDLASMSCCYVLLGHTDSVLCLDTCISSAGRNLLVTGSKDSRV 1360
            E+E+ LA+ATN+EQ+RVYDL SMSC YVL GHT+ VLCLDTC+S +GR L+VTGSKD  V
Sbjct: 360  EEEKCLAVATNIEQIRVYDLESMSCSYVLPGHTEIVLCLDTCVSRSGRALIVTGSKDHTV 419

Query: 1361 RLWDHEGQCCIGVGTGHLKDVGAVAFSKKQRNFIVSGSRDETLKIWSLDGVSEDGNRTIN 1540
            RLWD E + C+GVGTGH+  VGAVAFSKK +NF VSGS D T+K+WSLDG+SED ++ +N
Sbjct: 420  RLWDSESRNCVGVGTGHMGGVGAVAFSKKLKNFFVSGSSDRTIKVWSLDGISEDADQFVN 479

Query: 1541 LKAKAAVAAHKGDINCLAVAPNDSYVCSGSQDKTASIWRLPDLVYVVTLKGHKRGIWSVE 1720
            LKAKA VAAH  DIN LA+APNDS VCSGSQD+TA +WRLPDLV VV LKGHKRGIWSVE
Sbjct: 480  LKAKAVVAAHDKDINSLAIAPNDSLVCSGSQDRTACVWRLPDLVSVVVLKGHKRGIWSVE 539

Query: 1721 FSPVDQCVITASGDKTIKIWSISDGSCLKTFEGHTSRVLRASYISRGTQFVSCGADGLLK 1900
            FSPVDQCVITASGDKTIKIW+I+DGSCLKTFEGHTS VLRAS+++RGTQFVSCGADGL+K
Sbjct: 540  FSPVDQCVITASGDKTIKIWAIADGSCLKTFEGHTSSVLRASFLTRGTQFVSCGADGLVK 599

Query: 1901 LWMVRTSECIATYDQHEDKVWALAVGKKTEMLATGGSDAVVNLWHDSTXXXXXXXXXXXX 2080
            LW V+T+ECIATYDQHEDKVWALAVGK+TEM ATGG DA+VNLW+DST            
Sbjct: 600  LWTVKTNECIATYDQHEDKVWALAVGKQTEMFATGGGDALVNLWYDSTASDKEEAFRKEE 659

Query: 2081 XGVLKGQELENAVSDADYARAIRVAFELRRPHKLFDIFLDLCRKKHAEDQIDRALRTLGK 2260
             GVLKGQELENA+  ADY RAI++AFELRRPHKLF++F  +CRK+ A +QI+ ALR LGK
Sbjct: 660  EGVLKGQELENALLYADYTRAIQIAFELRRPHKLFELFSQICRKRGAVNQIENALRALGK 719

Query: 2261 EEIHLLFEYVREWNTKPKLCHIAQSVLFRVFNILSPTEILEIKGVSELLEGLIPYSQRHF 2440
            EE  LLFEYVREWNTKPKLCH+AQ VLF+VFNIL PTEILEIKGV ELLEGLIPYS RHF
Sbjct: 720  EEFRLLFEYVREWNTKPKLCHVAQYVLFQVFNILPPTEILEIKGVGELLEGLIPYSLRHF 779

Query: 2441 SRIDRHIRSTLLLDYTLSSMSVIEP-------EIEVRAPKEEPLLLHDEADEPWVKDLSP 2599
            SRIDR +RST L+DYTL  MSVIEP       +I      EE +LL +EA+E   ++  P
Sbjct: 780  SRIDRLLRSTFLVDYTLIGMSVIEPNTEAAQTDIPTNVTNEETMLLAEEAEE---EEQQP 836

Query: 2600 E--QEKIXXXXXXXXXXXXXAEKKLRDVGYVDALTLSLRA 2713
            E  +EK              + KK++   Y     + L+A
Sbjct: 837  EVLKEKTRSKKRKSNKAKDGSHKKVKGTAYTSVAAIPLQA 876


>emb|CBI26489.3| unnamed protein product [Vitis vinifera]
          Length = 876

 Score = 1199 bits (3102), Expect = 0.0
 Identities = 601/883 (68%), Positives = 702/883 (79%), Gaps = 12/883 (1%)
 Frame = +2

Query: 101  MKKSYRCTPSLQQFYTGGPFTVSSDGSFLVCACEDTIKIVDSSNASIKSTIQGDSQAVTC 280
            +KK+YR TP+LQQFYTGGPF V+SDGSF+VCAC+D IKIVDSSNASI+S ++GDSQ VT 
Sbjct: 6    LKKNYRSTPALQQFYTGGPFAVASDGSFIVCACDDAIKIVDSSNASIRSVVEGDSQTVTA 65

Query: 281  LTLSPNDHFLFSASHSRQIIVWDISTSKLLRSWKGHEGPVMGMVCDASGGLLATAGADRK 460
            L LSP+D  LFS+SHSRQI VW++S+ K +RSWKGHEGPVMGM CDASGG+LATAGADRK
Sbjct: 66   LALSPDDRLLFSSSHSRQIRVWELSSLKCIRSWKGHEGPVMGMACDASGGVLATAGADRK 125

Query: 461  VLVWDVDGGFCTHYFKGHKGVVTSIMFHPDPNRLLLFSGSDDATVRVWDLVSKKCVAVLE 640
            VLVWDVDGG+CTHYFKGHKGVVTSI+FHPD NRLLL SGSDDATVRVWDL+SKKCVA LE
Sbjct: 126  VLVWDVDGGYCTHYFKGHKGVVTSIIFHPDVNRLLLVSGSDDATVRVWDLMSKKCVATLE 185

Query: 641  KHFSTVTSLAVSENGCTLLSAGRDKV-VNLWDLHNFDFRMTLPTYEVLEAVLVISPRSRL 817
            +HFS VTSLAVSE+G TLLSAGRDK  ++L+ +   D   + P ++  +       ++ +
Sbjct: 186  RHFSAVTSLAVSEDGWTLLSAGRDKAGLHLFFIFTADMSSS-PCFDSKD-------QNNM 237

Query: 818  ADCLGFSEQLSGKKKKIWSPPIYFLTVGERGLIRIWNSESAHCLLEQQSSDITLSSDGDE 997
            A+   F   L   +    SP IYF+TVGERG +RIWNSE A CL EQQSSD+T+SSD D+
Sbjct: 238  AELPFFPSSLLAFE----SPAIYFITVGERGTVRIWNSEGAVCLFEQQSSDVTVSSDSDD 293

Query: 998  VKRGFTSAVMLPSDQGLLCVTADQQFLLYSPTQSLEDAFKLKLRKRLVGYNEEIVDMKFV 1177
             KRGFT+A +LP DQGLLCVT DQQFL YS     E+  KL L KRLVGYNEEIVDMKF+
Sbjct: 294  SKRGFTAATILPLDQGLLCVTVDQQFLFYSTLTHSEEMLKLMLSKRLVGYNEEIVDMKFL 353

Query: 1178 GEDEQFLAMATNLEQVRVYDLASMSCCYVLLGHTDSVLCLDTCISSAGRNLLVTGSKDSR 1357
            GEDEQFLA+ATNLEQV+VYDLASMSC YVL GHT  VLCLDTC+SS+GR  +VTGSKD+ 
Sbjct: 354  GEDEQFLAVATNLEQVQVYDLASMSCSYVLSGHTGIVLCLDTCVSSSGRTFVVTGSKDNS 413

Query: 1358 VRLWDHEGQCCIGVGTGHLKDVGAVAFSKKQRNFIVSGSRDETLKIWSLDGVSEDGNRTI 1537
            VRLW+ E +CCIGVGTGH   VGAVAFSKK RNF VSGS D TLK+WSLDG+S+D  + I
Sbjct: 414  VRLWESESRCCIGVGTGHTGAVGAVAFSKKLRNFFVSGSSDRTLKVWSLDGLSDDTEQPI 473

Query: 1538 NLKAKAAVAAHKGDINCLAVAPNDSYVCSGSQDKTASIWRLPDLVYVVTLKGHKRGIWSV 1717
            +LKAKA VAAH  DIN LAVAPNDS VCSGSQD+TA +WRLPDLV VV LKGHKRG+WSV
Sbjct: 474  SLKAKAVVAAHDKDINSLAVAPNDSLVCSGSQDRTACVWRLPDLVSVVVLKGHKRGVWSV 533

Query: 1718 EFSPVDQCVITASGDKTIKIWSISDGSCLKTFEGHTSRVLRASYISRGTQFVSCGADGLL 1897
            EFSPVDQCV+TASGDKTIKIW+ISDGSCLKTFEGHTS VLRAS+++RGTQ VSCGADGL+
Sbjct: 534  EFSPVDQCVMTASGDKTIKIWAISDGSCLKTFEGHTSSVLRASFLTRGTQVVSCGADGLV 593

Query: 1898 KLWMVRTSECIATYDQHEDKVWALAVGKKTEMLATGGSDAVVNLWHDSTXXXXXXXXXXX 2077
            KLW ++T+ECIATYDQHEDKVWALAVGKKTEMLATGGSDAVVNLWHDST           
Sbjct: 594  KLWTIKTNECIATYDQHEDKVWALAVGKKTEMLATGGSDAVVNLWHDSTASDKEEAFRKE 653

Query: 2078 XXGVLKGQELENAVSDADYARAIRVAFELRRPHKLFDIFLDLCRKKHAEDQIDRALRTLG 2257
              GVLKGQELENA+SD DY +AI++AFELRRPHKLF++F +L RK+ A +Q+++AL  LG
Sbjct: 654  EEGVLKGQELENALSDTDYTKAIQIAFELRRPHKLFELFSELSRKREAAEQVEKALHALG 713

Query: 2258 KEEIHLLFEYVREWNTKPKLCHIAQSVLFRVFNILSPTEILEIKGVSELLEGLIPYSQRH 2437
            KEE  LL EYVREWNTKPKLCH+AQ VLFRVF++L PTEI E++G+ ELLEG+IPYSQRH
Sbjct: 714  KEEFRLLLEYVREWNTKPKLCHVAQFVLFRVFSMLPPTEITEMRGIGELLEGIIPYSQRH 773

Query: 2438 FSRIDRHIRSTLLLDYTLSSMSVIEPEIEVRAPKEEPLL---LHDEADEPWVKDLSPEQ- 2605
            FSR+DR IR T LLDYTL+ MSVIEPE + +  K+EP     + D  D P  ++   EQ 
Sbjct: 774  FSRMDRLIRGTYLLDYTLTGMSVIEPETDAKEIKDEPETWPEVKDSGDWPSPENADEEQE 833

Query: 2606 -------EKIXXXXXXXXXXXXXAEKKLRDVGYVDALTLSLRA 2713
                   EK              A+KK+++  Y     +SL+A
Sbjct: 834  QTLEGLKEKASSKKRKSRKSRDRAQKKVKETAYTKISAISLQA 876


>ref|XP_002873790.1| hypothetical protein ARALYDRAFT_909661 [Arabidopsis lyrata subsp.
            lyrata] gi|297319627|gb|EFH50049.1| hypothetical protein
            ARALYDRAFT_909661 [Arabidopsis lyrata subsp. lyrata]
          Length = 878

 Score = 1159 bits (2999), Expect = 0.0
 Identities = 563/820 (68%), Positives = 675/820 (82%), Gaps = 4/820 (0%)
 Frame = +2

Query: 98   AMKKSYRCTPSLQQFYTGGPFTVSSDGSFLVCACEDTIKIVDSSNASIKSTIQGDSQAVT 277
            ++KK+YRC+ SL+QFY GGPF VSSDGSF+ CAC D I IVDS+++S+KSTI+G+S  +T
Sbjct: 5    SLKKNYRCSRSLKQFYGGGPFIVSSDGSFIACACGDAINIVDSTDSSVKSTIEGESDTLT 64

Query: 278  CLTLSPNDHFLFSASHSRQIIVWDISTSKLLRSWKGHEGPVMGMVCDASGGLLATAGADR 457
             L LSP+D  LFSA HSRQI VWD+ T K +RSWKGHEGPVMGM C ASGGLLATAGADR
Sbjct: 65   ALALSPDDRLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGADR 124

Query: 458  KVLVWDVDGGFCTHYFKGHKGVVTSIMFHPDPNRLLLFSGSDDATVRVWDLVSK----KC 625
            KVLVWDVDGGFCTHYFKGHKGVV+SI+FHPD N+ +LFSGSDDATVRVWDL++K    KC
Sbjct: 125  KVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTNKNILFSGSDDATVRVWDLLAKNTEKKC 184

Query: 626  VAVLEKHFSTVTSLAVSENGCTLLSAGRDKVVNLWDLHNFDFRMTLPTYEVLEAVLVISP 805
            +A+LEKHFS VTS+A+SE+G  L SAGRDKVVNLWDLH++  + T+ TYEVLEAV  +S 
Sbjct: 185  LAILEKHFSAVTSIALSEDGWNLFSAGRDKVVNLWDLHDYSCKTTIATYEVLEAVTAVSS 244

Query: 806  RSRLADCLGFSEQLSGKKKKIWSPPIYFLTVGERGLIRIWNSESAHCLLEQQSSDITLSS 985
             +  A  +   +Q   KKK+  S   YF+TVGERG++RIW SE + CL EQ+SSDIT+SS
Sbjct: 245  GTPFASFVASLDQKKSKKKESDSQGTYFITVGERGVVRIWKSEGSICLYEQKSSDITVSS 304

Query: 986  DGDEVKRGFTSAVMLPSDQGLLCVTADQQFLLYSPTQSLEDAFKLKLRKRLVGYNEEIVD 1165
            D +E KRGFT+A ML SD+GLLCVTADQQF  YS  +++E++ +L L KRLVGYNEEI D
Sbjct: 305  DDEESKRGFTAAAMLSSDRGLLCVTADQQFFFYSVVENVEES-ELVLSKRLVGYNEEIAD 363

Query: 1166 MKFVGEDEQFLAMATNLEQVRVYDLASMSCCYVLLGHTDSVLCLDTCISSAGRNLLVTGS 1345
            MKF+G++EQFLA+ATNLE+VRVYD+A+MSC YVL GH + +L LDTC+SS+G  L+VTGS
Sbjct: 364  MKFLGDEEQFLAVATNLEEVRVYDVATMSCSYVLAGHKEVILSLDTCVSSSGNVLIVTGS 423

Query: 1346 KDSRVRLWDHEGQCCIGVGTGHLKDVGAVAFSKKQRNFIVSGSRDETLKIWSLDGVSEDG 1525
            KD  VRLW+   + CIGVGTGH  D+ AVAF+KK  +F VSGS D TLK+WSLDG+SE  
Sbjct: 424  KDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEGS 483

Query: 1526 NRTINLKAKAAVAAHKGDINCLAVAPNDSYVCSGSQDKTASIWRLPDLVYVVTLKGHKRG 1705
               +NLK ++ VAAH  DIN +AVA NDS VC+GS+D+TASIWRLPDLV+VVTLKGHKR 
Sbjct: 484  EDPVNLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRR 543

Query: 1706 IWSVEFSPVDQCVITASGDKTIKIWSISDGSCLKTFEGHTSRVLRASYISRGTQFVSCGA 1885
            I+SVEFS VDQCV+TASGDKT+KIW+ISDGSCLKTFEGHTS VLRAS+I+ GTQFVSCGA
Sbjct: 544  IFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITEGTQFVSCGA 603

Query: 1886 DGLLKLWMVRTSECIATYDQHEDKVWALAVGKKTEMLATGGSDAVVNLWHDSTXXXXXXX 2065
            DGLLKLW V TSECIATYDQHEDKVWALAVGKKTEM+ATGG DAV+NLWHDST       
Sbjct: 604  DGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINLWHDSTASDKEDE 663

Query: 2066 XXXXXXGVLKGQELENAVSDADYARAIRVAFELRRPHKLFDIFLDLCRKKHAEDQIDRAL 2245
                   +L+GQELENAV DA+Y +AIR+AFELRRPHK+F++F  LCRK+ +++QI +AL
Sbjct: 664  FRKEEEAILRGQELENAVLDAEYTKAIRLAFELRRPHKVFELFAGLCRKRESDEQIVKAL 723

Query: 2246 RTLGKEEIHLLFEYVREWNTKPKLCHIAQSVLFRVFNILSPTEILEIKGVSELLEGLIPY 2425
            + L KEE  LLFEYVREWNTKPKLCHIAQ VL++ FNIL PTEI+++KG+ ELLEGLIPY
Sbjct: 724  QGLEKEEFRLLFEYVREWNTKPKLCHIAQFVLYQTFNILPPTEIVQVKGIGELLEGLIPY 783

Query: 2426 SQRHFSRIDRHIRSTLLLDYTLSSMSVIEPEIEVRAPKEE 2545
            SQRHF+RIDR +RS+ LLDYTL  MSVI+PE E   PK++
Sbjct: 784  SQRHFNRIDRFVRSSFLLDYTLGEMSVIDPETETEYPKDK 823


>ref|NP_568338.2| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
            gi|9755727|emb|CAC01839.1| WD40-repeat protein
            [Arabidopsis thaliana] gi|332004950|gb|AED92333.1|
            transducin/WD40 domain-containing protein [Arabidopsis
            thaliana]
          Length = 876

 Score = 1159 bits (2997), Expect = 0.0
 Identities = 571/848 (67%), Positives = 683/848 (80%), Gaps = 10/848 (1%)
 Frame = +2

Query: 98   AMKKSYRCTPSLQQFYTGGPFTVSSDGSFLVCACEDTIKIVDSSNASIKSTIQGDSQAVT 277
            ++KK+YRC+ SL+QFY GGPF VSSDGSF+ CAC D I IVDS+++S+KSTI+G+S  +T
Sbjct: 5    SLKKNYRCSRSLKQFYGGGPFIVSSDGSFIACACGDVINIVDSTDSSVKSTIEGESDTLT 64

Query: 278  CLTLSPNDHFLFSASHSRQIIVWDISTSKLLRSWKGHEGPVMGMVCDASGGLLATAGADR 457
             L LSP+D  LFSA HSRQI VWD+ T K +RSWKGHEGPVMGM C ASGGLLATAGADR
Sbjct: 65   ALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGADR 124

Query: 458  KVLVWDVDGGFCTHYFKGHKGVVTSIMFHPDPNRLLLFSGSDDATVRVWDL----VSKKC 625
            KVLVWDVDGGFCTHYF+GHKGVV+SI+FHPD N+ +L SGSDDATVRVWDL      KKC
Sbjct: 125  KVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKC 184

Query: 626  VAVLEKHFSTVTSLAVSENGCTLLSAGRDKVVNLWDLHNFDFRMTLPTYEVLEAVLVISP 805
            +A++EKHFS VTS+A+SE+G TL SAGRDKVVNLWDLH++  + T+ TYEVLEAV  +S 
Sbjct: 185  LAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWDLHDYSCKATVATYEVLEAVTTVSS 244

Query: 806  RSRLADCLGFSEQLSGKKKKIWSPPIYFLTVGERGLIRIWNSESAHCLLEQQSSDITLSS 985
             +  A  +   +Q   KKK+  S   YF+TVGERG++RIW SE + CL EQ+SSDIT+SS
Sbjct: 245  GTPFASFVASLDQKKSKKKESDSQATYFITVGERGVVRIWKSEGSICLYEQKSSDITVSS 304

Query: 986  DGDEVKRGFTSAVMLPSDQGLLCVTADQQFLLYSPTQSLEDAFKLKLRKRLVGYNEEIVD 1165
            D +E KRGFT+A MLPSD GLLCVTADQQF  YS  +++E+  +L L KRLVGYNEEI D
Sbjct: 305  DDEESKRGFTAAAMLPSDHGLLCVTADQQFFFYSVVENVEET-ELVLSKRLVGYNEEIAD 363

Query: 1166 MKFVGEDEQFLAMATNLEQVRVYDLASMSCCYVLLGHTDSVLCLDTCISSAGRNLLVTGS 1345
            MKF+G++EQFLA+ATNLE+VRVYD+A+MSC YVL GH + VL LDTC+SS+G  L+VTGS
Sbjct: 364  MKFLGDEEQFLAVATNLEEVRVYDVATMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGS 423

Query: 1346 KDSRVRLWDHEGQCCIGVGTGHLKDVGAVAFSKKQRNFIVSGSRDETLKIWSLDGVSEDG 1525
            KD  VRLW+   + CIGVGTGH  D+ AVAF+KK  +F VSGS D TLK+WSLDG+SED 
Sbjct: 424  KDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDS 483

Query: 1526 NRTINLKAKAAVAAHKGDINCLAVAPNDSYVCSGSQDKTASIWRLPDLVYVVTLKGHKRG 1705
               INLK ++ VAAH  DIN +AVA NDS VC+GS+D+TASIWRLPDLV+VVTLKGHKR 
Sbjct: 484  EEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRR 543

Query: 1706 IWSVEFSPVDQCVITASGDKTIKIWSISDGSCLKTFEGHTSRVLRASYISRGTQFVSCGA 1885
            I+SVEFS VDQCV+TASGDKT+KIW+ISDGSCLKTFEGHTS VLRAS+I+ GTQFVSCGA
Sbjct: 544  IFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGA 603

Query: 1886 DGLLKLWMVRTSECIATYDQHEDKVWALAVGKKTEMLATGGSDAVVNLWHDSTXXXXXXX 2065
            DGLLKLW V TSECIATYDQHEDKVWALAVGKKTEM+ATGG DAV+NLWHDST       
Sbjct: 604  DGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINLWHDSTASDKEDD 663

Query: 2066 XXXXXXGVLKGQELENAVSDADYARAIRVAFELRRPHKLFDIFLDLCRKKHAEDQIDRAL 2245
                   +L+GQELENAV DA+Y +AIR+AFEL RPHK+F++F  LCRK+ +++QI +AL
Sbjct: 664  FRKEEEAILRGQELENAVLDAEYTKAIRLAFELCRPHKVFELFSGLCRKRDSDEQIVKAL 723

Query: 2246 RTLGKEEIHLLFEYVREWNTKPKLCHIAQSVLFRVFNILSPTEILEIKGVSELLEGLIPY 2425
            + L KEE  LLFEYVREWNTKPKLCHIAQ VL++ FNIL PTEI+++KG+ ELLEGLIPY
Sbjct: 724  QGLEKEEFRLLFEYVREWNTKPKLCHIAQFVLYKTFNILPPTEIVQVKGIGELLEGLIPY 783

Query: 2426 SQRHFSRIDRHIRSTLLLDYTLSSMSVIEPE-IEVRAPKEEPLLLHD-----EADEPWVK 2587
            SQRHFSRIDR +RS+ LLDYTL  MSVI+PE +E   PK+E     D     E D   +K
Sbjct: 784  SQRHFSRIDRFVRSSFLLDYTLGEMSVIDPETVETEYPKDEKKKEKDVIAAMEQDTDELK 843

Query: 2588 DLSPEQEK 2611
              +P +++
Sbjct: 844  QETPSRKR 851