BLASTX nr result

ID: Coptis21_contig00012355 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012355
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314476.1| predicted protein [Populus trichocarpa] gi|2...    87   5e-25
ref|XP_004157267.1| PREDICTED: uncharacterized LOC101213491 [Cuc...    87   4e-24
ref|XP_004135641.1| PREDICTED: uncharacterized protein LOC101213...    87   4e-24
ref|XP_003626352.1| Chaperone protein dnaJ [Medicago truncatula]...    92   5e-24
ref|XP_002266568.2| PREDICTED: uncharacterized protein LOC100255...    88   9e-24

>ref|XP_002314476.1| predicted protein [Populus trichocarpa] gi|222863516|gb|EEF00647.1|
           predicted protein [Populus trichocarpa]
          Length = 866

 Score = 87.4 bits (215), Expect(2) = 5e-25
 Identities = 43/75 (57%), Positives = 54/75 (72%), Gaps = 2/75 (2%)
 Frame = -2

Query: 443 DLKWSLDPDRYSSYEFDFVEILSDYNEQSGVGVAYLEKVKGFVSLF--QPKNGKAPFQIP 270
           DLKW  + D +  YE++FVEILS+Y E  G  VA+L KVKGFVSLF    K G   F+IP
Sbjct: 509 DLKWISNADAHQDYEYEFVEILSEYAEGVGARVAFLGKVKGFVSLFCRIRKEGMDVFEIP 568

Query: 269 PCELYRFSHMVPSYR 225
           P EL+RFSHM+PS++
Sbjct: 569 PAELFRFSHMIPSFK 583



 Score = 52.0 bits (123), Expect(2) = 5e-25
 Identities = 21/34 (61%), Positives = 28/34 (82%)
 Frame = -3

Query: 166 HMVPSYRTTGKERDGIPKRSFELDTASLPANLLE 65
           HM+PS++ TG ER+G+P+ SFELD ASLP  +LE
Sbjct: 577 HMIPSFKLTGNEREGVPRGSFELDPASLPKTILE 610


>ref|XP_004157267.1| PREDICTED: uncharacterized LOC101213491 [Cucumis sativus]
          Length = 847

 Score = 87.0 bits (214), Expect(2) = 4e-24
 Identities = 40/75 (53%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
 Frame = -2

Query: 443 DLKWSLDPDRYSSYEFDFVEILSDYNEQSGVGVAYLEKVKGFVSLFQ--PKNGKAPFQIP 270
           D++WS +P+++ ++EF+FVEILSDY E  G+ VA+++KVK FV LF    K+ +  F+IP
Sbjct: 598 DIRWSSEPEKHVAFEFEFVEILSDYVEGVGISVAFMDKVKDFVCLFHTTEKHRQNSFKIP 657

Query: 269 PCELYRFSHMVPSYR 225
           P ELYRFSH +PS R
Sbjct: 658 PNELYRFSHQIPSVR 672



 Score = 49.3 bits (116), Expect(2) = 4e-24
 Identities = 21/32 (65%), Positives = 25/32 (78%)
 Frame = -3

Query: 166 HMVPSYRTTGKERDGIPKRSFELDTASLPANL 71
           H +PS R TGKER G+PK SFELD A+LP N+
Sbjct: 666 HQIPSVRMTGKERKGVPKGSFELDPAALPPNI 697


>ref|XP_004135641.1| PREDICTED: uncharacterized protein LOC101213491 [Cucumis sativus]
          Length = 847

 Score = 87.0 bits (214), Expect(2) = 4e-24
 Identities = 40/75 (53%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
 Frame = -2

Query: 443 DLKWSLDPDRYSSYEFDFVEILSDYNEQSGVGVAYLEKVKGFVSLFQ--PKNGKAPFQIP 270
           D++WS +P+++ ++EF+FVEILSDY E  G+ VA+++KVK FV LF    K+ +  F+IP
Sbjct: 598 DIRWSSEPEKHVAFEFEFVEILSDYVEGVGISVAFMDKVKDFVCLFHTTEKHRQNSFKIP 657

Query: 269 PCELYRFSHMVPSYR 225
           P ELYRFSH +PS R
Sbjct: 658 PNELYRFSHQIPSVR 672



 Score = 49.3 bits (116), Expect(2) = 4e-24
 Identities = 21/32 (65%), Positives = 25/32 (78%)
 Frame = -3

Query: 166 HMVPSYRTTGKERDGIPKRSFELDTASLPANL 71
           H +PS R TGKER G+PK SFELD A+LP N+
Sbjct: 666 HQIPSVRMTGKERKGVPKGSFELDPAALPPNI 697


>ref|XP_003626352.1| Chaperone protein dnaJ [Medicago truncatula]
           gi|124360144|gb|ABN08160.1| Heat shock protein DnaJ
           [Medicago truncatula] gi|355501367|gb|AES82570.1|
           Chaperone protein dnaJ [Medicago truncatula]
          Length = 1084

 Score = 92.0 bits (227), Expect(2) = 5e-24
 Identities = 44/74 (59%), Positives = 57/74 (77%), Gaps = 2/74 (2%)
 Frame = -2

Query: 443 DLKWSLDPDRYSSYEFDFVEILSDYNEQSGVGVAYLEKVKGFVSLFQP--KNGKAPFQIP 270
           D+ WS +P++ S Y+F+FVE+LSD++E  GV V+YL KVKGFVSLFQ   +NG +   IP
Sbjct: 582 DIGWSSEPEKNSEYQFEFVEVLSDFDESDGVKVSYLSKVKGFVSLFQQTVQNGISLCCIP 641

Query: 269 PCELYRFSHMVPSY 228
           P ELYRFSH VPS+
Sbjct: 642 PTELYRFSHRVPSF 655



 Score = 43.9 bits (102), Expect(2) = 5e-24
 Identities = 18/34 (52%), Positives = 25/34 (73%)
 Frame = -3

Query: 166 HMVPSYRTTGKERDGIPKRSFELDTASLPANLLE 65
           H VPS+  TGKER+G+P  S+ELD A LP ++ +
Sbjct: 650 HRVPSFVMTGKEREGVPSGSYELDPAGLPMSVFQ 683


>ref|XP_002266568.2| PREDICTED: uncharacterized protein LOC100255461 [Vitis vinifera]
          Length = 1169

 Score = 87.8 bits (216), Expect(2) = 9e-24
 Identities = 42/72 (58%), Positives = 55/72 (76%), Gaps = 2/72 (2%)
 Frame = -2

Query: 434 WSLDPDRYSSYEFDFVEILSDYNEQSGVGVAYLEKVKGFVSLFQP--KNGKAPFQIPPCE 261
           WS +P+ +  YEF++VEILSD+   +G+GVAYL KVKGFVSLF+   ++G   FQIPP E
Sbjct: 644 WSSNPEIHRKYEFEYVEILSDFVPDAGIGVAYLGKVKGFVSLFRQSVQHGIVLFQIPPSE 703

Query: 260 LYRFSHMVPSYR 225
           L RFSH +PS+R
Sbjct: 704 LLRFSHRIPSFR 715



 Score = 47.4 bits (111), Expect(2) = 9e-24
 Identities = 20/32 (62%), Positives = 25/32 (78%)
 Frame = -3

Query: 166 HMVPSYRTTGKERDGIPKRSFELDTASLPANL 71
           H +PS+R TG E +G+PK SFELD A+LP NL
Sbjct: 709 HRIPSFRMTGSEGEGVPKGSFELDPAALPNNL 740


Top