BLASTX nr result
ID: Coptis21_contig00012352
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00012352
(851 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003632482.1| PREDICTED: WD repeat-containing protein 5-li... 479 e-133
ref|XP_004143426.1| PREDICTED: WD repeat-containing protein 5-li... 471 e-131
ref|XP_003609656.1| WD repeat-containing protein [Medicago trunc... 464 e-128
ref|XP_003529576.1| PREDICTED: WD repeat-containing protein 5-li... 462 e-128
gb|ABK22482.1| unknown [Picea sitchensis] 458 e-127
>ref|XP_003632482.1| PREDICTED: WD repeat-containing protein 5-like [Vitis vinifera]
gi|297735857|emb|CBI18611.3| unnamed protein product
[Vitis vinifera]
Length = 313
Score = 479 bits (1233), Expect = e-133
Identities = 228/282 (80%), Positives = 254/282 (90%), Gaps = 2/282 (0%)
Frame = +3
Query: 12 MEATESSGIKPYTLKQTLTGHKRAISGVKFSDDGNLLASSSADKTIRLYDTSSSF--LQE 185
M + S I PY LKQTLT HKRA+S VKFS DG LL SSSADKT+R + TS F LQE
Sbjct: 1 MASDPSEFITPYKLKQTLTAHKRAVSAVKFSSDGLLLGSSSADKTLRTWSTSGDFSTLQE 60
Query: 186 FQGHDGGVSDLAFSSDSRYLCSGSDDKTVRIWDVETSTLVKTLHGHTNYVFCVNYNPQSN 365
F GHD G+SDLAFSSDSR++CS SDDKTVR+WDVET +L+KTL GHTN+VFCVN+NPQSN
Sbjct: 61 FHGHDQGISDLAFSSDSRHVCSASDDKTVRLWDVETGSLIKTLQGHTNHVFCVNFNPQSN 120
Query: 366 MIVSGSFDETVRVWDVKSGKCLRVLPAHSDPVTSVHFNRDGSLIVSSSYDGLCRIWDAST 545
MIVSGSFDETVRVWDVK+GKCL+VLPAHSDPVT+ +FNRDGSLIVSSSYDGLCRIWDAST
Sbjct: 121 MIVSGSFDETVRVWDVKTGKCLKVLPAHSDPVTAANFNRDGSLIVSSSYDGLCRIWDAST 180
Query: 546 GHCMKTLIDDENPPVSFVKFSPNGKFILASSLDSTMRLWNFSTGKFLKTYTGHVNSKYCI 725
GHCMKTLIDDENPPVSFVKFSPNGKFIL +LD+T+RLWNFSTGKFLKTYTGHVNSKYCI
Sbjct: 181 GHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNFSTGKFLKTYTGHVNSKYCI 240
Query: 726 SSTFSVTNGKYIVSGSEDHHVYLWDLQSKEVIQKLEGHTDTV 851
SSTFSVTNGKYIV GSED+ VYLW+LQ+++++QKLEGHTDTV
Sbjct: 241 SSTFSVTNGKYIVGGSEDNCVYLWELQTRKIVQKLEGHTDTV 282
Score = 85.1 bits (209), Expect = 2e-14
Identities = 48/166 (28%), Positives = 85/166 (51%), Gaps = 7/166 (4%)
Frame = +3
Query: 57 QTLTGHKRAISGVKFSDDGNLLASSSADKTIRLYDTSSSFLQE--FQGHDGGVSDLAFSS 230
+ L H ++ F+ DG+L+ SSS D R++D S+ + + VS + FS
Sbjct: 143 KVLPAHSDPVTAANFNRDGSLIVSSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSP 202
Query: 231 DSRYLCSGSDDKTVRIWDVETSTLVKTLHGHTNYVFCVNYN---PQSNMIVSGSFDETVR 401
+ +++ G+ D T+R+W+ T +KT GH N +C++ IV GS D V
Sbjct: 203 NGKFILVGTLDNTLRLWNFSTGKFLKTYTGHVNSKYCISSTFSVTNGKYIVGGSEDNCVY 262
Query: 402 VWDVKSGKCLRVLPAHSDPVTSVHFNRDGSLIVSSSY--DGLCRIW 533
+W++++ K ++ L H+D V SV + ++I S + D +IW
Sbjct: 263 LWELQTRKIVQKLEGHTDTVISVSCHPSQNMIASGALGSDKTVKIW 308
Score = 79.7 bits (195), Expect = 8e-13
Identities = 41/127 (32%), Positives = 73/127 (57%), Gaps = 6/127 (4%)
Frame = +3
Query: 45 YTLKQTLTGHKRAISGVKFSDDGNLLASSSADKTIRLYDTSSS-FLQEFQGHDGG---VS 212
+ +K + +S VKFS +G + + D T+RL++ S+ FL+ + GH +S
Sbjct: 182 HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNFSTGKFLKTYTGHVNSKYCIS 241
Query: 213 DLAFSSDSRYLCSGSDDKTVRIWDVETSTLVKTLHGHTNYVFCVNYNPQSNMIVSGSF-- 386
++ +Y+ GS+D V +W+++T +V+ L GHT+ V V+ +P NMI SG+
Sbjct: 242 STFSVTNGKYIVGGSEDNCVYLWELQTRKIVQKLEGHTDTVISVSCHPSQNMIASGALGS 301
Query: 387 DETVRVW 407
D+TV++W
Sbjct: 302 DKTVKIW 308
>ref|XP_004143426.1| PREDICTED: WD repeat-containing protein 5-like [Cucumis sativus]
gi|449531922|ref|XP_004172934.1| PREDICTED: WD
repeat-containing protein 5-like [Cucumis sativus]
Length = 318
Score = 471 bits (1212), Expect = e-131
Identities = 224/284 (78%), Positives = 253/284 (89%), Gaps = 3/284 (1%)
Frame = +3
Query: 9 LMEATESSGIKPYTLKQTLTGHKRAISGVKFSDDGNLLASSSADKTIRLYDTSSSFL--- 179
L E +++ KPYTL QTLT HKR IS VKFS DG LL SSSADKT+R Y S+S +
Sbjct: 2 LSEPSQTDSYKPYTLSQTLTSHKRCISSVKFSADGRLLGSSSADKTLRTYSCSNSTVTPV 61
Query: 180 QEFQGHDGGVSDLAFSSDSRYLCSGSDDKTVRIWDVETSTLVKTLHGHTNYVFCVNYNPQ 359
QEFQGH+ GVSDLAFSSDSR+L S SDDKT+R+WDV T +LVKTL+GHTNYVFCVN+NPQ
Sbjct: 62 QEFQGHEQGVSDLAFSSDSRFLVSASDDKTLRLWDVSTGSLVKTLNGHTNYVFCVNFNPQ 121
Query: 360 SNMIVSGSFDETVRVWDVKSGKCLRVLPAHSDPVTSVHFNRDGSLIVSSSYDGLCRIWDA 539
SNMIVSGSFDETVR+WDVKSGKCL+VLPAHSDPVT V FNRDGSLIVSSSYDGLCRIWDA
Sbjct: 122 SNMIVSGSFDETVRIWDVKSGKCLKVLPAHSDPVTGVDFNRDGSLIVSSSYDGLCRIWDA 181
Query: 540 STGHCMKTLIDDENPPVSFVKFSPNGKFILASSLDSTMRLWNFSTGKFLKTYTGHVNSKY 719
STGHC+KTLIDDENPPVSFVKFSPNGKFIL +LD+T+RLWNFSTGKFLKTYTGH NSK+
Sbjct: 182 STGHCVKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNFSTGKFLKTYTGHTNSKF 241
Query: 720 CISSTFSVTNGKYIVSGSEDHHVYLWDLQSKEVIQKLEGHTDTV 851
CISSTFSVTNG+YI SGSED+ VYLW+LQ+++++QKLEGH+DTV
Sbjct: 242 CISSTFSVTNGRYIASGSEDNCVYLWELQTRQIVQKLEGHSDTV 285
Score = 90.5 bits (223), Expect = 4e-16
Identities = 52/166 (31%), Positives = 88/166 (53%), Gaps = 7/166 (4%)
Frame = +3
Query: 57 QTLTGHKRAISGVKFSDDGNLLASSSADKTIRLYDTSSSFLQE--FQGHDGGVSDLAFSS 230
+ L H ++GV F+ DG+L+ SSS D R++D S+ + + VS + FS
Sbjct: 146 KVLPAHSDPVTGVDFNRDGSLIVSSSYDGLCRIWDASTGHCVKTLIDDENPPVSFVKFSP 205
Query: 231 DSRYLCSGSDDKTVRIWDVETSTLVKTLHGHTNYVFCVNYN---PQSNMIVSGSFDETVR 401
+ +++ G+ D T+R+W+ T +KT GHTN FC++ I SGS D V
Sbjct: 206 NGKFILVGTLDNTLRLWNFSTGKFLKTYTGHTNSKFCISSTFSVTNGRYIASGSEDNCVY 265
Query: 402 VWDVKSGKCLRVLPAHSDPVTSVHFNRDGSLIVSSSY--DGLCRIW 533
+W++++ + ++ L HSD V SV + ++I S + D +IW
Sbjct: 266 LWELQTRQIVQKLEGHSDTVISVSCHPSENMIASGAVGNDKTVKIW 311
Score = 82.4 bits (202), Expect = 1e-13
Identities = 43/133 (32%), Positives = 76/133 (57%), Gaps = 6/133 (4%)
Frame = +3
Query: 45 YTLKQTLTGHKRAISGVKFSDDGNLLASSSADKTIRLYDTSSS-FLQEFQGHDGG---VS 212
+ +K + +S VKFS +G + + D T+RL++ S+ FL+ + GH +S
Sbjct: 185 HCVKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNFSTGKFLKTYTGHTNSKFCIS 244
Query: 213 DLAFSSDSRYLCSGSDDKTVRIWDVETSTLVKTLHGHTNYVFCVNYNPQSNMIVSGSF-- 386
++ RY+ SGS+D V +W+++T +V+ L GH++ V V+ +P NMI SG+
Sbjct: 245 STFSVTNGRYIASGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSENMIASGAVGN 304
Query: 387 DETVRVWDVKSGK 425
D+TV++W K +
Sbjct: 305 DKTVKIWTQKGSE 317
>ref|XP_003609656.1| WD repeat-containing protein [Medicago truncatula]
gi|355510711|gb|AES91853.1| WD repeat-containing protein
[Medicago truncatula]
Length = 326
Score = 464 bits (1193), Expect = e-128
Identities = 221/286 (77%), Positives = 254/286 (88%), Gaps = 10/286 (3%)
Frame = +3
Query: 24 ESSGIKPYTLKQTLTGHKRAISGVKFSDDGNLLASSSADKTIRLY-------DTSS---S 173
+SS KPYTL QTLTGHKRAIS VKFS +G LLASSSADKT+R Y D++S S
Sbjct: 10 DSSNYKPYTLSQTLTGHKRAISAVKFSSNGRLLASSSADKTLRTYGFTNSDSDSNSLTLS 69
Query: 174 FLQEFQGHDGGVSDLAFSSDSRYLCSGSDDKTVRIWDVETSTLVKTLHGHTNYVFCVNYN 353
+Q+++GH GVSDLAFSSDSRYL S SDDKT+R+WDV T +LVKTLHGHTNYVFCVN+N
Sbjct: 70 PMQQYEGHQHGVSDLAFSSDSRYLVSASDDKTIRLWDVPTGSLVKTLHGHTNYVFCVNFN 129
Query: 354 PQSNMIVSGSFDETVRVWDVKSGKCLRVLPAHSDPVTSVHFNRDGSLIVSSSYDGLCRIW 533
PQSN+IVSGSFDETVRVWDVKSGKCL+VLPAHSDPVT+V FNRDG+LIVSSSYDGLCRIW
Sbjct: 130 PQSNVIVSGSFDETVRVWDVKSGKCLKVLPAHSDPVTAVDFNRDGTLIVSSSYDGLCRIW 189
Query: 534 DASTGHCMKTLIDDENPPVSFVKFSPNGKFILASSLDSTMRLWNFSTGKFLKTYTGHVNS 713
DASTGHC+KTLIDDENPPVS+VKFSPN KFIL +LD+ +RLWN+STGKFLKTYTGHVNS
Sbjct: 190 DASTGHCIKTLIDDENPPVSYVKFSPNAKFILVGTLDNNLRLWNYSTGKFLKTYTGHVNS 249
Query: 714 KYCISSTFSVTNGKYIVSGSEDHHVYLWDLQSKEVIQKLEGHTDTV 851
KYCISS+FS+TNGKY+V GSED+ +YLW LQS++++QKLEGHTD+V
Sbjct: 250 KYCISSSFSITNGKYVVGGSEDNCIYLWGLQSRKIVQKLEGHTDSV 295
Score = 70.9 bits (172), Expect = 4e-10
Identities = 37/127 (29%), Positives = 70/127 (55%), Gaps = 6/127 (4%)
Frame = +3
Query: 45 YTLKQTLTGHKRAISGVKFSDDGNLLASSSADKTIRLYDTSSS-FLQEFQGHDGG---VS 212
+ +K + +S VKFS + + + D +RL++ S+ FL+ + GH +S
Sbjct: 195 HCIKTLIDDENPPVSYVKFSPNAKFILVGTLDNNLRLWNYSTGKFLKTYTGHVNSKYCIS 254
Query: 213 DLAFSSDSRYLCSGSDDKTVRIWDVETSTLVKTLHGHTNYVFCVNYNPQSNMIVSGSF-- 386
++ +Y+ GS+D + +W +++ +V+ L GHT+ V V+ +P NMI SG+
Sbjct: 255 SSFSITNGKYVVGGSEDNCIYLWGLQSRKIVQKLEGHTDSVVSVSCHPTENMIASGALGN 314
Query: 387 DETVRVW 407
D+TV++W
Sbjct: 315 DKTVKIW 321
>ref|XP_003529576.1| PREDICTED: WD repeat-containing protein 5-like [Glycine max]
Length = 329
Score = 462 bits (1190), Expect = e-128
Identities = 221/290 (76%), Positives = 255/290 (87%), Gaps = 11/290 (3%)
Frame = +3
Query: 15 EATESSGIKP-YTLKQTLTGHKRAISGVKFSDDGNLLASSSADKTIRLYDTSSSF----- 176
E+ +S +KP Y L QTL+GHKRAIS VKFS +G LLASS+ADKT+R Y ++S
Sbjct: 9 ESLDSDSMKPNYILSQTLSGHKRAISAVKFSSNGRLLASSAADKTLRTYGFTNSDSDSDS 68
Query: 177 -----LQEFQGHDGGVSDLAFSSDSRYLCSGSDDKTVRIWDVETSTLVKTLHGHTNYVFC 341
+QE++GH+ GVSDLAFSSDSR+L S SDDKT+R+WDV T +L+KTLHGHTNYVFC
Sbjct: 69 LTLSPMQEYEGHEQGVSDLAFSSDSRFLVSASDDKTLRLWDVPTGSLIKTLHGHTNYVFC 128
Query: 342 VNYNPQSNMIVSGSFDETVRVWDVKSGKCLRVLPAHSDPVTSVHFNRDGSLIVSSSYDGL 521
VN+NPQSN+IVSGSFDETVRVWDVKSGKCL+VLPAHSDPVT+V FNRDGSLIVSSSYDGL
Sbjct: 129 VNFNPQSNIIVSGSFDETVRVWDVKSGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGL 188
Query: 522 CRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILASSLDSTMRLWNFSTGKFLKTYTG 701
CRIWDASTGHCMKTLIDDENPPVSFVKFSPN KFIL +LD+T+RLWN+STGKFLKTYTG
Sbjct: 189 CRIWDASTGHCMKTLIDDENPPVSFVKFSPNAKFILVGTLDNTLRLWNYSTGKFLKTYTG 248
Query: 702 HVNSKYCISSTFSVTNGKYIVSGSEDHHVYLWDLQSKEVIQKLEGHTDTV 851
HVNSKYCISSTFS+TNGKYIV GSED+ +YLWDLQS++++QKLEGH+D V
Sbjct: 249 HVNSKYCISSTFSITNGKYIVGGSEDNCIYLWDLQSRKIVQKLEGHSDAV 298
Score = 90.9 bits (224), Expect = 3e-16
Identities = 51/166 (30%), Positives = 87/166 (52%), Gaps = 7/166 (4%)
Frame = +3
Query: 57 QTLTGHKRAISGVKFSDDGNLLASSSADKTIRLYDTSSSFLQE--FQGHDGGVSDLAFSS 230
+ L H ++ V F+ DG+L+ SSS D R++D S+ + + VS + FS
Sbjct: 159 KVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSP 218
Query: 231 DSRYLCSGSDDKTVRIWDVETSTLVKTLHGHTNYVFCVNYN---PQSNMIVSGSFDETVR 401
+++++ G+ D T+R+W+ T +KT GH N +C++ IV GS D +
Sbjct: 219 NAKFILVGTLDNTLRLWNYSTGKFLKTYTGHVNSKYCISSTFSITNGKYIVGGSEDNCIY 278
Query: 402 VWDVKSGKCLRVLPAHSDPVTSVHFNRDGSLIVSSSY--DGLCRIW 533
+WD++S K ++ L HSD V SV + ++I S + D +IW
Sbjct: 279 LWDLQSRKIVQKLEGHSDAVVSVSCHPTENMIASGALGNDNTVKIW 324
Score = 74.3 bits (181), Expect = 3e-11
Identities = 38/127 (29%), Positives = 71/127 (55%), Gaps = 6/127 (4%)
Frame = +3
Query: 45 YTLKQTLTGHKRAISGVKFSDDGNLLASSSADKTIRLYDTSSS-FLQEFQGHDGG---VS 212
+ +K + +S VKFS + + + D T+RL++ S+ FL+ + GH +S
Sbjct: 198 HCMKTLIDDENPPVSFVKFSPNAKFILVGTLDNTLRLWNYSTGKFLKTYTGHVNSKYCIS 257
Query: 213 DLAFSSDSRYLCSGSDDKTVRIWDVETSTLVKTLHGHTNYVFCVNYNPQSNMIVSGSF-- 386
++ +Y+ GS+D + +WD+++ +V+ L GH++ V V+ +P NMI SG+
Sbjct: 258 STFSITNGKYIVGGSEDNCIYLWDLQSRKIVQKLEGHSDAVVSVSCHPTENMIASGALGN 317
Query: 387 DETVRVW 407
D TV++W
Sbjct: 318 DNTVKIW 324
>gb|ABK22482.1| unknown [Picea sitchensis]
Length = 314
Score = 458 bits (1178), Expect = e-127
Identities = 216/283 (76%), Positives = 249/283 (87%), Gaps = 5/283 (1%)
Frame = +3
Query: 18 ATESSG----IKPYTLKQTLTGHKRAISGVKFSDDGNLLASSSADKTIRLYDTSS-SFLQ 182
A+E+ G KPY LK LTGHKRA+S VKFS DG LL S+SADK++R++ S +
Sbjct: 2 ASEAQGSGNSFKPYKLKHILTGHKRAVSSVKFSADGKLLGSASADKSVRIWSAGDGSAKR 61
Query: 183 EFQGHDGGVSDLAFSSDSRYLCSGSDDKTVRIWDVETSTLVKTLHGHTNYVFCVNYNPQS 362
E QGH GVSD+A+SSDS Y+CS SDDKT+RIWDV T +KTL GHTNYVFCVN+NPQS
Sbjct: 62 ELQGHAEGVSDMAWSSDSHYVCSASDDKTLRIWDVHTGDCIKTLKGHTNYVFCVNFNPQS 121
Query: 363 NMIVSGSFDETVRVWDVKSGKCLRVLPAHSDPVTSVHFNRDGSLIVSSSYDGLCRIWDAS 542
N+IVSGSFDETVR+WDV++GKCL+VLPAHSDPVT+VHFNRDGSLIVSSSYDGLCRIWD++
Sbjct: 122 NLIVSGSFDETVRIWDVRTGKCLKVLPAHSDPVTAVHFNRDGSLIVSSSYDGLCRIWDSA 181
Query: 543 TGHCMKTLIDDENPPVSFVKFSPNGKFILASSLDSTMRLWNFSTGKFLKTYTGHVNSKYC 722
TGHC+KTLIDDENPPVSFV FSPNGKFILA +LD+T+RLWNF+TGKFLKTYTGHVNSKYC
Sbjct: 182 TGHCLKTLIDDENPPVSFVNFSPNGKFILAGTLDNTLRLWNFATGKFLKTYTGHVNSKYC 241
Query: 723 ISSTFSVTNGKYIVSGSEDHHVYLWDLQSKEVIQKLEGHTDTV 851
ISSTFSVTNGKYIVSGSED+ VYLWDLQ++ ++QKLEGHTDTV
Sbjct: 242 ISSTFSVTNGKYIVSGSEDNCVYLWDLQARNIVQKLEGHTDTV 284
Score = 85.5 bits (210), Expect = 1e-14
Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 7/166 (4%)
Frame = +3
Query: 57 QTLTGHKRAISGVKFSDDGNLLASSSADKTIRLYDTSSSFLQE--FQGHDGGVSDLAFSS 230
+ L H ++ V F+ DG+L+ SSS D R++D+++ + + VS + FS
Sbjct: 145 KVLPAHSDPVTAVHFNRDGSLIVSSSYDGLCRIWDSATGHCLKTLIDDENPPVSFVNFSP 204
Query: 231 DSRYLCSGSDDKTVRIWDVETSTLVKTLHGHTNYVFCVNYN---PQSNMIVSGSFDETVR 401
+ +++ +G+ D T+R+W+ T +KT GH N +C++ IVSGS D V
Sbjct: 205 NGKFILAGTLDNTLRLWNFATGKFLKTYTGHVNSKYCISSTFSVTNGKYIVSGSEDNCVY 264
Query: 402 VWDVKSGKCLRVLPAHSDPVTSVHFNRDGSLIVSSSY--DGLCRIW 533
+WD+++ ++ L H+D V SV + + I S + D RIW
Sbjct: 265 LWDLQARNIVQKLEGHTDTVISVSCHPTENKIASGALENDKTLRIW 310
Score = 77.8 bits (190), Expect = 3e-12
Identities = 40/127 (31%), Positives = 71/127 (55%), Gaps = 6/127 (4%)
Frame = +3
Query: 45 YTLKQTLTGHKRAISGVKFSDDGNLLASSSADKTIRLYD-TSSSFLQEFQGHDGG---VS 212
+ LK + +S V FS +G + + + D T+RL++ + FL+ + GH +S
Sbjct: 184 HCLKTLIDDENPPVSFVNFSPNGKFILAGTLDNTLRLWNFATGKFLKTYTGHVNSKYCIS 243
Query: 213 DLAFSSDSRYLCSGSDDKTVRIWDVETSTLVKTLHGHTNYVFCVNYNPQSNMIVSGSF-- 386
++ +Y+ SGS+D V +WD++ +V+ L GHT+ V V+ +P N I SG+
Sbjct: 244 STFSVTNGKYIVSGSEDNCVYLWDLQARNIVQKLEGHTDTVISVSCHPTENKIASGALEN 303
Query: 387 DETVRVW 407
D+T+R+W
Sbjct: 304 DKTLRIW 310