BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012308
         (1597 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263635.1| PREDICTED: formamidopyrimidine-DNA glycosyla...   479   e-133
ref|XP_002327413.1| predicted protein [Populus trichocarpa] gi|2...   459   e-127
ref|XP_002517673.1| formamidopyrimidine-DNA glycosylase, putativ...   459   e-126
ref|XP_003542122.1| PREDICTED: formamidopyrimidine-DNA glycosyla...   450   e-124
gb|AAC97952.1| putative formamidopyrimidine-DNA glycosylase 1 [A...   447   e-123

>ref|XP_002263635.1| PREDICTED: formamidopyrimidine-DNA glycosylase-like [Vitis vinifera]
          Length = 403

 Score =  479 bits (1233), Expect = e-133
 Identities = 241/340 (70%), Positives = 278/340 (81%), Gaps = 4/340 (1%)
 Frame = +3

Query: 6    MPELPEVEAARRAIEEHCLGKKIKSALVADDSKVIDAGRISPSDFQASLIGKTIVAAHRK 185
            MPELPEVEAARRA+EEHC+GKKI  A++A+DSKVID   +SPSDF+ASL+GKTIV+AHRK
Sbjct: 1    MPELPEVEAARRAVEEHCVGKKITKAVIANDSKVIDG--VSPSDFEASLLGKTIVSAHRK 58

Query: 186  GKNLWLQLDSPPFPSFQFGMAGAIYIKGVAVTKYKRSQVNDTEEEWPSKYSKLFVQLDEG 365
            GKN+WLQLDSPPFPSFQFGMAGA+YIKGVAVTKYKRS V DT+E WPSKYSKLF++LD+G
Sbjct: 59   GKNMWLQLDSPPFPSFQFGMAGAVYIKGVAVTKYKRSAVKDTDE-WPSKYSKLFIELDDG 117

Query: 366  VEFSFTDKRRFARVRLLKDPASVPPISELGPDALLEPMTIDVLVQSLSKKKVAIKTLLLD 545
            +E SFTDKRRFA+VRLL+DPASVPPISELGPDALLEPMTID  ++SLSKKK+AIK LLLD
Sbjct: 118  LELSFTDKRRFAKVRLLEDPASVPPISELGPDALLEPMTIDEFIKSLSKKKIAIKALLLD 177

Query: 546  QSYIAGIGNWIADEVLYQARIHPLQVASSLPKESCQTLLECINKVTEKSVEVGADSSQFP 725
            QSYIAGIGNW+ADEVLY ARIHPLQVASSL +ESC+TL +CI +V EK++EVGADSSQFP
Sbjct: 178  QSYIAGIGNWLADEVLYHARIHPLQVASSLTRESCETLHQCIKQVIEKAMEVGADSSQFP 237

Query: 726  DNWIFHSRDKKPGKAFVDGKRIEFITAGGRTTAYVPELQKLPKDQ----GVKSRSGQPKR 893
             NWIFHSR+KKPGKAFVDGK+I+FI+AGGRTTAYVPELQKL   Q     VK R   P R
Sbjct: 238  SNWIFHSREKKPGKAFVDGKKIDFISAGGRTTAYVPELQKLSGTQAAKASVKPRKQTPMR 297

Query: 894  XXXXXXXXXXXXXXXXNPKKNKLNNQGKTRAKANTSTAKG 1013
                             P   +  N  + ++K   +   G
Sbjct: 298  KKEENDEDDDDDDALDEPASEEEKNTKRAKSKKGQNPKGG 337


>ref|XP_002327413.1| predicted protein [Populus trichocarpa] gi|222835967|gb|EEE74388.1|
           predicted protein [Populus trichocarpa]
          Length = 307

 Score =  459 bits (1181), Expect = e-127
 Identities = 232/295 (78%), Positives = 262/295 (88%)
 Frame = +3

Query: 6   MPELPEVEAARRAIEEHCLGKKIKSALVADDSKVIDAGRISPSDFQASLIGKTIVAAHRK 185
           MPELPEVEAARRAIEEHC+GKKIK A++ADDSKVID   +SPSDF A+L+GKTIV+A RK
Sbjct: 1   MPELPEVEAARRAIEEHCIGKKIKKAIIADDSKVIDG--VSPSDFVAALVGKTIVSALRK 58

Query: 186 GKNLWLQLDSPPFPSFQFGMAGAIYIKGVAVTKYKRSQVNDTEEEWPSKYSKLFVQLDEG 365
           GKNLWLQLDSPPFPSFQFGMAGA+YIKGVAVTKYKRS VND++E WPSKYSK FVQLD+G
Sbjct: 59  GKNLWLQLDSPPFPSFQFGMAGAVYIKGVAVTKYKRSAVNDSDE-WPSKYSKFFVQLDDG 117

Query: 366 VEFSFTDKRRFARVRLLKDPASVPPISELGPDALLEPMTIDVLVQSLSKKKVAIKTLLLD 545
           +E SFTDKRRFA+VRLL+DPAS PPISELGPDALLEPMT+D L  SLSKKKVAIK LLLD
Sbjct: 118 LELSFTDKRRFAKVRLLEDPASKPPISELGPDALLEPMTVDELHGSLSKKKVAIKALLLD 177

Query: 546 QSYIAGIGNWIADEVLYQARIHPLQVASSLPKESCQTLLECINKVTEKSVEVGADSSQFP 725
           QS+++GIGNWIADEVLYQARIHPLQ+ASSL +ES  TL +CI +V EK+VEVGADSSQFP
Sbjct: 178 QSFVSGIGNWIADEVLYQARIHPLQIASSLSRESSATLHKCIKEVIEKAVEVGADSSQFP 237

Query: 726 DNWIFHSRDKKPGKAFVDGKRIEFITAGGRTTAYVPELQKLPKDQGVKSRSGQPK 890
           +NWIFHSR+KK  K F+DGK I+FI AGGRTTAYVP LQKL  +Q  K+  G+PK
Sbjct: 238 NNWIFHSREKKSKKTFIDGKEIDFIVAGGRTTAYVPGLQKLNGNQAGKA-VGKPK 291


>ref|XP_002517673.1| formamidopyrimidine-DNA glycosylase, putative [Ricinus communis]
           gi|223543305|gb|EEF44837.1| formamidopyrimidine-DNA
           glycosylase, putative [Ricinus communis]
          Length = 403

 Score =  459 bits (1180), Expect = e-126
 Identities = 224/293 (76%), Positives = 262/293 (89%)
 Frame = +3

Query: 6   MPELPEVEAARRAIEEHCLGKKIKSALVADDSKVIDAGRISPSDFQASLIGKTIVAAHRK 185
           MPELPEVEAAR+AIEE+CLGKKIK A++A D+KVID   +SPSDF+A+L+GKT+++AHRK
Sbjct: 1   MPELPEVEAARKAIEENCLGKKIKKAIIASDAKVIDG--VSPSDFEAALVGKTLISAHRK 58

Query: 186 GKNLWLQLDSPPFPSFQFGMAGAIYIKGVAVTKYKRSQVNDTEEEWPSKYSKLFVQLDEG 365
           GKNLWLQLDSPPFPSFQFGMAGAIYIKGVAVTKYKRS VNDT+E WPSKYSKLFV+LD+G
Sbjct: 59  GKNLWLQLDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVNDTDE-WPSKYSKLFVELDDG 117

Query: 366 VEFSFTDKRRFARVRLLKDPASVPPISELGPDALLEPMTIDVLVQSLSKKKVAIKTLLLD 545
           +E SFTDKRRFA+VRLL +P SVPPISELGPDALL+PM +D   +SL KKK+ IK LLLD
Sbjct: 118 LELSFTDKRRFAKVRLLNNPVSVPPISELGPDALLQPMAVDEFYKSLCKKKMPIKALLLD 177

Query: 546 QSYIAGIGNWIADEVLYQARIHPLQVASSLPKESCQTLLECINKVTEKSVEVGADSSQFP 725
           QS+I+GIGNWIADEVLYQARIHP Q ASS  KESC TLL+CI +V EK++EV ADSSQFP
Sbjct: 178 QSFISGIGNWIADEVLYQARIHPQQSASSFTKESCATLLKCIKEVIEKAIEVEADSSQFP 237

Query: 726 DNWIFHSRDKKPGKAFVDGKRIEFITAGGRTTAYVPELQKLPKDQGVKSRSGQ 884
           ++WIFHSR+KKPGKAF+DGK+I+FIT+GGRTTAYVPELQKL  +Q  K R+ +
Sbjct: 238 NSWIFHSREKKPGKAFIDGKKIDFITSGGRTTAYVPELQKLSGNQISKRRNSE 290


>ref|XP_003542122.1| PREDICTED: formamidopyrimidine-DNA glycosylase-like [Glycine max]
          Length = 399

 Score =  450 bits (1158), Expect = e-124
 Identities = 228/338 (67%), Positives = 269/338 (79%), Gaps = 1/338 (0%)
 Frame = +3

Query: 6    MPELPEVEAARRAIEEHCLGKKIKSALVADDSKVIDAGRISPSDFQASLIGKTIVAAHRK 185
            MPELPEVEAARRA+E +C+GK+I   +VADDSKVI    +SPSDFQAS++GK IVAAHRK
Sbjct: 1    MPELPEVEAARRAVEYNCVGKRITKCVVADDSKVIHG--VSPSDFQASVLGKLIVAAHRK 58

Query: 186  GKNLWLQLDSPPFPSFQFGMAGAIYIKGVAVTKYKRSQVNDTEEEWPSKYSKLFVQLDEG 365
            GKN+WLQLDSPPFPSFQFGMAGAIYIKG AVT YKRS V D E+EWPSKYSK+F++LD+G
Sbjct: 59   GKNMWLQLDSPPFPSFQFGMAGAIYIKGAAVTNYKRSAVKD-EDEWPSKYSKIFIELDDG 117

Query: 366  VEFSFTDKRRFARVRLLKDPASVPPISELGPDALLEPMTIDVLVQSLSKKKVAIKTLLLD 545
            +E SFTDKRRFA+VRLLKDP SVPPISELGPDAL EPMT++   +SL KKK  IK LLLD
Sbjct: 118  LELSFTDKRRFAKVRLLKDPTSVPPISELGPDALFEPMTLEKFTESLHKKKTEIKALLLD 177

Query: 546  QSYIAGIGNWIADEVLYQARIHPLQVASSLPKESCQTLLECINKVTEKSVEVGADSSQFP 725
            QS+I+GIGNW+ADEVLYQARIHP QVASSL  ESC  L +CI +V EK++EVGA+SSQ+P
Sbjct: 178  QSFISGIGNWVADEVLYQARIHPRQVASSLSNESCSNLSKCIKEVIEKAIEVGAESSQYP 237

Query: 726  DNWIFHSRDKKPGKAFVDGKRIEFITAGGRTTAYVPELQKLPKDQGVKSRSGQPKRXXXX 905
             NWIFHSR+KKPGKAFVDGK+I+FITAGGRTTAYVPELQKL     VK  +G+P +    
Sbjct: 238  TNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLSGSLDVK-ETGKPNK--RQ 294

Query: 906  XXXXXXXXXXXXNPKKNKLNNQGKTRAKANTST-AKGK 1016
                         P   ++++ G  ++K  T   AKG+
Sbjct: 295  ASKKVRVDDDTEKPTNGEVDDLGSVKSKKGTKAGAKGR 332


>gb|AAC97952.1| putative formamidopyrimidine-DNA glycosylase 1 [Arabidopsis
           thaliana]
          Length = 390

 Score =  447 bits (1150), Expect = e-123
 Identities = 223/296 (75%), Positives = 253/296 (85%)
 Frame = +3

Query: 6   MPELPEVEAARRAIEEHCLGKKIKSALVADDSKVIDAGRISPSDFQASLIGKTIVAAHRK 185
           MPELPEVEAARRAIEE+CLGKKIK  ++ADD+KVI    ISPSDFQ S++GKTI++A RK
Sbjct: 1   MPELPEVEAARRAIEENCLGKKIKRVIIADDNKVIHG--ISPSDFQTSILGKTIISARRK 58

Query: 186 GKNLWLQLDSPPFPSFQFGMAGAIYIKGVAVTKYKRSQVNDTEEEWPSKYSKLFVQLDEG 365
           GKNLWL+LDSPPFPSFQFGMAGAIYIKGVAVTKYKRS V D+EE WPSKYSK FV+LD+G
Sbjct: 59  GKNLWLELDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVKDSEE-WPSKYSKFFVELDDG 117

Query: 366 VEFSFTDKRRFARVRLLKDPASVPPISELGPDALLEPMTIDVLVQSLSKKKVAIKTLLLD 545
           +E SFTDKRRFA+VRLL +P SV PISELGPDALLEPMT+D   +SL+KKK+ IK LLLD
Sbjct: 118 LELSFTDKRRFAKVRLLANPTSVSPISELGPDALLEPMTVDEFAESLAKKKITIKPLLLD 177

Query: 546 QSYIAGIGNWIADEVLYQARIHPLQVASSLPKESCQTLLECINKVTEKSVEVGADSSQFP 725
           Q YI+GIGNWIADEVLYQARIHPLQ ASSL KE C+ L   I +V EK+VEV ADSSQFP
Sbjct: 178 QGYISGIGNWIADEVLYQARIHPLQTASSLSKEQCEALHTSIKEVIEKAVEVDADSSQFP 237

Query: 726 DNWIFHSRDKKPGKAFVDGKRIEFITAGGRTTAYVPELQKLPKDQGVKSRSGQPKR 893
            NWIFH+R+KKPGKAFVDGK+I+FITAGGRTTAYVPELQKL      K+   +P +
Sbjct: 238 SNWIFHNREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLYGKDAEKAAKVRPAK 293