BLASTX nr result

ID: Coptis21_contig00012282 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012282
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283008.2| PREDICTED: neurochondrin-like [Vitis vinifera]    152   4e-35
emb|CBI21102.3| unnamed protein product [Vitis vinifera]              152   4e-35
ref|XP_002515468.1| conserved hypothetical protein [Ricinus comm...   132   2e-29
ref|XP_002869295.1| neurochondrin family protein [Arabidopsis ly...   129   3e-28
ref|XP_002324889.1| predicted protein [Populus trichocarpa] gi|2...   128   5e-28

>ref|XP_002283008.2| PREDICTED: neurochondrin-like [Vitis vinifera]
          Length = 629

 Score =  152 bits (383), Expect = 4e-35
 Identities = 73/106 (68%), Positives = 90/106 (84%)
 Frame = -2

Query: 358 LVATIARQFALLHNALKFKALNLLSTLLSSEYAAPLHDALRLVSNDIWPIYVRVGIAAIL 179
           +VA IAR+FA+LH+ALKF+AL+LLS +LSS+Y+AP+HD LR++SNDIW  YVRVGI AIL
Sbjct: 194 MVAVIAREFAVLHDALKFEALHLLSAILSSKYSAPVHDTLRIMSNDIWSTYVRVGIVAIL 253

Query: 178 QNRVASTEKFQALVLAESSISILGEKWLIDQRKLPGGEDPLPADRC 41
           QNRVA  EK QAL+LAES ISILGE+WL+ Q  LP  +D +PADRC
Sbjct: 254 QNRVAPAEKLQALILAESVISILGERWLLGQMNLPDAKDSVPADRC 299


>emb|CBI21102.3| unnamed protein product [Vitis vinifera]
          Length = 713

 Score =  152 bits (383), Expect = 4e-35
 Identities = 73/106 (68%), Positives = 90/106 (84%)
 Frame = -2

Query: 358 LVATIARQFALLHNALKFKALNLLSTLLSSEYAAPLHDALRLVSNDIWPIYVRVGIAAIL 179
           +VA IAR+FA+LH+ALKF+AL+LLS +LSS+Y+AP+HD LR++SNDIW  YVRVGI AIL
Sbjct: 278 MVAVIAREFAVLHDALKFEALHLLSAILSSKYSAPVHDTLRIMSNDIWSTYVRVGIVAIL 337

Query: 178 QNRVASTEKFQALVLAESSISILGEKWLIDQRKLPGGEDPLPADRC 41
           QNRVA  EK QAL+LAES ISILGE+WL+ Q  LP  +D +PADRC
Sbjct: 338 QNRVAPAEKLQALILAESVISILGERWLLGQMNLPDAKDSVPADRC 383


>ref|XP_002515468.1| conserved hypothetical protein [Ricinus communis]
           gi|223545412|gb|EEF46917.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 631

 Score =  132 bits (333), Expect = 2e-29
 Identities = 65/106 (61%), Positives = 81/106 (76%)
 Frame = -2

Query: 358 LVATIARQFALLHNALKFKALNLLSTLLSSEYAAPLHDALRLVSNDIWPIYVRVGIAAIL 179
           +V ++AR FA+LHN LKF+AL LLS +LSS+ +  L DALR ++ + WP Y+RVGI AIL
Sbjct: 197 VVVSLARHFAVLHNQLKFEALRLLSDILSSKCSQQLQDALRTIAGNTWPDYMRVGIVAIL 256

Query: 178 QNRVASTEKFQALVLAESSISILGEKWLIDQRKLPGGEDPLPADRC 41
           QNRVA  EK  AL+LAES +SILGE WLIDQ  LP  +D +PADRC
Sbjct: 257 QNRVAPAEKLHALILAESMVSILGESWLIDQANLPDLQDSMPADRC 302


>ref|XP_002869295.1| neurochondrin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297315131|gb|EFH45554.1| neurochondrin family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 621

 Score =  129 bits (323), Expect = 3e-28
 Identities = 67/106 (63%), Positives = 84/106 (79%)
 Frame = -2

Query: 358 LVATIARQFALLHNALKFKALNLLSTLLSSEYAAPLHDALRLVSNDIWPIYVRVGIAAIL 179
           +VA +ARQFA+LHNALKF+AL+LLS + SSEY+A LH+ LR + ++ W  Y+R GI AIL
Sbjct: 195 VVAAVARQFAVLHNALKFEALHLLSAVFSSEYSALLHEPLRSMPDNNWADYMRTGIVAIL 254

Query: 178 QNRVASTEKFQALVLAESSISILGEKWLIDQRKLPGGEDPLPADRC 41
           QNRVA +EKF AL+LAE+ +SILGEKWLI   KLP  +  LPADRC
Sbjct: 255 QNRVAPSEKFHALILAENMMSILGEKWLIGGVKLPNVD--LPADRC 298


>ref|XP_002324889.1| predicted protein [Populus trichocarpa] gi|222866323|gb|EEF03454.1|
           predicted protein [Populus trichocarpa]
          Length = 618

 Score =  128 bits (321), Expect = 5e-28
 Identities = 64/106 (60%), Positives = 81/106 (76%)
 Frame = -2

Query: 358 LVATIARQFALLHNALKFKALNLLSTLLSSEYAAPLHDALRLVSNDIWPIYVRVGIAAIL 179
           +VAT+ARQFALLHN+LKF+AL+LLS + SS+Y+ PL DAL  ++ + WP ++R GI AIL
Sbjct: 191 MVATVARQFALLHNSLKFEALHLLSEIFSSKYSKPLCDALCAMAGNKWPDHMRAGIVAIL 250

Query: 178 QNRVASTEKFQALVLAESSISILGEKWLIDQRKLPGGEDPLPADRC 41
           QNRV   EK  AL+LAES ISI+GE WL+ Q  LP   D +PADRC
Sbjct: 251 QNRVEPAEKLHALILAESVISIMGEGWLLGQPNLPDLPDSIPADRC 296


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