BLASTX nr result

ID: Coptis21_contig00012269 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012269
         (214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB88648.1| microtubule bundling polypeptide TMBP200 [Nicoti...    60   2e-07
ref|XP_002534264.1| microtubule associated protein xmap215, puta...    60   2e-07
ref|XP_002271272.2| PREDICTED: protein MOR1-like, partial [Vitis...    59   5e-07
emb|CBI29531.3| unnamed protein product [Vitis vinifera]               59   5e-07
ref|XP_002300496.1| microtubule organization protein [Populus tr...    58   7e-07

>dbj|BAB88648.1| microtubule bundling polypeptide TMBP200 [Nicotiana tabacum]
          Length = 2029

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 32/41 (78%), Positives = 34/41 (82%), Gaps = 2/41 (4%)
 Frame = +3

Query: 3    QNASEAFRTYIRDGLAQMEKNAAAGSISSSVDFS--PPTAL 119
            QNASEAFRTYIRDGLAQMEKNAAAG   SSV  S  PP++L
Sbjct: 1825 QNASEAFRTYIRDGLAQMEKNAAAGRTPSSVPMSTPPPSSL 1865


>ref|XP_002534264.1| microtubule associated protein xmap215, putative [Ricinus communis]
            gi|223525620|gb|EEF28119.1| microtubule associated
            protein xmap215, putative [Ricinus communis]
          Length = 1992

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 32/41 (78%), Positives = 34/41 (82%), Gaps = 2/41 (4%)
 Frame = +3

Query: 3    QNASEAFRTYIRDGLAQMEKNAAAGSISSSVDFS--PPTAL 119
            QNASEAFRTYIRDGLAQMEKNAAAG   SS+  S  PP+AL
Sbjct: 1791 QNASEAFRTYIRDGLAQMEKNAAAGRTPSSLPMSTPPPSAL 1831


>ref|XP_002271272.2| PREDICTED: protein MOR1-like, partial [Vitis vinifera]
          Length = 1007

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/41 (75%), Positives = 34/41 (82%), Gaps = 2/41 (4%)
 Frame = +3

Query: 3   QNASEAFRTYIRDGLAQMEKNAAAGSISSSVDFS--PPTAL 119
           QNASEAFRTYIRDGLAQMEKNAAAG   SS+  S  PP++L
Sbjct: 801 QNASEAFRTYIRDGLAQMEKNAAAGRTPSSLPMSTPPPSSL 841


>emb|CBI29531.3| unnamed protein product [Vitis vinifera]
          Length = 991

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/41 (75%), Positives = 34/41 (82%), Gaps = 2/41 (4%)
 Frame = +3

Query: 3   QNASEAFRTYIRDGLAQMEKNAAAGSISSSVDFS--PPTAL 119
           QNASEAFRTYIRDGLAQMEKNAAAG   SS+  S  PP++L
Sbjct: 785 QNASEAFRTYIRDGLAQMEKNAAAGRTPSSLPMSTPPPSSL 825


>ref|XP_002300496.1| microtubule organization protein [Populus trichocarpa]
            gi|222847754|gb|EEE85301.1| microtubule organization
            protein [Populus trichocarpa]
          Length = 2036

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 31/41 (75%), Positives = 33/41 (80%), Gaps = 2/41 (4%)
 Frame = +3

Query: 3    QNASEAFRTYIRDGLAQMEKNAAAGSISSSVDFS--PPTAL 119
            QNASEAFRTYIRDGLAQMEKN AAG   SS+  S  PP+AL
Sbjct: 1835 QNASEAFRTYIRDGLAQMEKNTAAGRTPSSLPISTPPPSAL 1875


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