BLASTX nr result

ID: Coptis21_contig00012252 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012252
         (1404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280733.1| PREDICTED: uncharacterized protein LOC100255...   489   e-136
ref|XP_002299861.1| predicted protein [Populus trichocarpa] gi|2...   466   e-129
ref|XP_003531788.1| PREDICTED: uncharacterized protein LOC100781...   463   e-128
ref|XP_002314167.1| predicted protein [Populus trichocarpa] gi|2...   463   e-128
ref|XP_003545779.1| PREDICTED: uncharacterized protein LOC100814...   461   e-127

>ref|XP_002280733.1| PREDICTED: uncharacterized protein LOC100255385 [Vitis vinifera]
          Length = 396

 Score =  489 bits (1260), Expect = e-136
 Identities = 244/399 (61%), Positives = 288/399 (72%), Gaps = 28/399 (7%)
 Frame = +2

Query: 143  TSLFLHSPPIINPISLS---TRKCSLRHFVRHHNVHPNVASFNKPFSVSPSQHFF----- 298
            TS+FL+S   INP   S   T K S+R F +H  V  +V + N      PS+ FF     
Sbjct: 4    TSVFLNSR--INPFGFSVANTFKPSIRPFNKHLQVQLHVNNSNLKTIKPPSKCFFRACPL 61

Query: 299  ---------------KCSYSSNTSSLPEFENPVTK-----TFTSVKEALKDSKLTPFDVC 418
                           KCSYS++TSS  E  NP  K     +F S+K  L  S+LTP D+C
Sbjct: 62   SSSPEIRRTHLLCPPKCSYSNSTSS--ESHNPFLKPLKNLSFDSLKATL--SQLTPIDIC 117

Query: 419  KWTGVFCVVIAAIKWAVGVFFNPFFWMYFSWTWLFWPYFLAIALGVYGIYCQRKHSVGEA 598
            KW+G+ CV IAA K  V +  NPFFWMYFSWTWLFWP+FLA+ + VYG+YC R+H  GEA
Sbjct: 118  KWSGILCVSIAATKRTVNLLLNPFFWMYFSWTWLFWPWFLAVGVAVYGLYCLRRHLCGEA 177

Query: 599  NVFEQLVIVTSAFTWLTLVPPAHFNGYLQGWPXXXXXXXXXXXXXXXSVRKRLYGDYYAR 778
            NVFEQ+ IVTS FTWLTLVPPAHFNG+L+GWP               SVRKRLYGDY+ R
Sbjct: 178  NVFEQIAIVTSVFTWLTLVPPAHFNGFLEGWPFVFFFVYHYFFFFNVSVRKRLYGDYFLR 237

Query: 779  DHDPKWDVKTSSFSRLLFCVGVMVGHWLAAFEGPELHLTPGGWSNVGILVLIMTTLFMQY 958
             HDPKWDV   ++ RLLFC+GVMVGHWLAA+EGPELHL PGGW+N+ +  LIM TLFMQY
Sbjct: 238  PHDPKWDVSPPNWHRLLFCIGVMVGHWLAAYEGPELHLIPGGWNNLWVWALIMVTLFMQY 297

Query: 959  HSTLYLAKYSEKVVVPTSVVQFGPYRWVRHPIYASVMLLFSTYCIALRAPLSLLFVVAVC 1138
            HSTLYLAKYSEKVVVPT+VVQFGPYRWVRHPIYAS MLLF +YC+ALRAP+S LFV+AVC
Sbjct: 298  HSTLYLAKYSEKVVVPTAVVQFGPYRWVRHPIYASTMLLFVSYCLALRAPISSLFVIAVC 357

Query: 1139 VVYFEQKVKLEEHLMIETFGERYTEYMNKVRYKFIPFLY 1255
            ++Y+EQKVKLEE  M+ETFGE+Y EY NKV+YKFIPF+Y
Sbjct: 358  LMYYEQKVKLEEASMVETFGEKYMEYANKVKYKFIPFVY 396


>ref|XP_002299861.1| predicted protein [Populus trichocarpa] gi|222847119|gb|EEE84666.1|
            predicted protein [Populus trichocarpa]
          Length = 324

 Score =  466 bits (1200), Expect = e-129
 Identities = 218/322 (67%), Positives = 253/322 (78%), Gaps = 3/322 (0%)
 Frame = +2

Query: 299  KCSYSSNTSSLPEFENPVTKTFTSVK-EALKDS--KLTPFDVCKWTGVFCVVIAAIKWAV 469
            KCS+S + S+     +P  K F ++  + LK +  +LTP D+ KW+G+  + IAA KW V
Sbjct: 3    KCSHSGSASTDGSQNHPFLKPFKNLSLDELKATLLQLTPIDIIKWSGILSIAIAATKWTV 62

Query: 470  GVFFNPFFWMYFSWTWLFWPYFLAIALGVYGIYCQRKHSVGEANVFEQLVIVTSAFTWLT 649
             +  NPFFWMYFSWTWLFWP+F+AI L VYG+YC  KHS+GEA++FEQ  IVTS FTWLT
Sbjct: 63   NLVLNPFFWMYFSWTWLFWPWFVAILLAVYGLYCFYKHSIGEASIFEQFAIVTSVFTWLT 122

Query: 650  LVPPAHFNGYLQGWPXXXXXXXXXXXXXXXSVRKRLYGDYYARDHDPKWDVKTSSFSRLL 829
            LVPPAHFNGYLQGWP               SVRKRLYGDYYAR HDPKWD+    +SRLL
Sbjct: 123  LVPPAHFNGYLQGWPFVFFFVYHYFFFFNVSVRKRLYGDYYARPHDPKWDLHPPRWSRLL 182

Query: 830  FCVGVMVGHWLAAFEGPELHLTPGGWSNVGILVLIMTTLFMQYHSTLYLAKYSEKVVVPT 1009
            FCVGVMVGHWLAA EGPELHL PGGWSNVGI +LI+ TL MQY+ST YLAKYSEKVVVP 
Sbjct: 183  FCVGVMVGHWLAALEGPELHLIPGGWSNVGIWILILATLLMQYNSTFYLAKYSEKVVVPI 242

Query: 1010 SVVQFGPYRWVRHPIYASVMLLFSTYCIALRAPLSLLFVVAVCVVYFEQKVKLEEHLMIE 1189
            +VVQFGPYRWVRHPIY+S MLLF+TY +ALRAPLSLLFVVAVC++Y+ QK K+EE LMIE
Sbjct: 243  AVVQFGPYRWVRHPIYSSTMLLFATYFLALRAPLSLLFVVAVCLMYYAQKAKMEEDLMIE 302

Query: 1190 TFGERYTEYMNKVRYKFIPFLY 1255
            TFGE+Y EYM KVRYKFIP +Y
Sbjct: 303  TFGEKYLEYMGKVRYKFIPLVY 324


>ref|XP_003531788.1| PREDICTED: uncharacterized protein LOC100781970 [Glycine max]
          Length = 394

 Score =  463 bits (1192), Expect = e-128
 Identities = 230/381 (60%), Positives = 275/381 (72%), Gaps = 24/381 (6%)
 Frame = +2

Query: 185  SLSTRKCSLRHFVRHHNV-----HPNVASF-------NKPFSVS-PSQ------HFFKCS 307
            S+ + K SLR F +H +       P   SF       N   SVS P++      HF +CS
Sbjct: 18   SIVSNKVSLRPFNKHFHADVLANRPKNISFQLNCTFGNPSSSVSKPARKRADLLHFPRCS 77

Query: 308  YSSNTSSLPEFENPVTK-----TFTSVKEALKDSKLTPFDVCKWTGVFCVVIAAIKWAVG 472
             SSN S+  E +N V       +F S+K  L   +LTP DV KW+G+ C++ AA KW   
Sbjct: 78   ISSNAST--ESQNSVIDFFRNLSFDSIKATLL--QLTPIDVVKWSGILCIITAATKWTKN 133

Query: 473  VFFNPFFWMYFSWTWLFWPYFLAIALGVYGIYCQRKHSVGEANVFEQLVIVTSAFTWLTL 652
            + F+PFFWMYFSWTWLFWP+ +A+ L VYG+YC RKH  GEAN+FEQL IVTS FTWLTL
Sbjct: 134  MLFSPFFWMYFSWTWLFWPWMVAVVLAVYGLYCFRKHLHGEANIFEQLAIVTSVFTWLTL 193

Query: 653  VPPAHFNGYLQGWPXXXXXXXXXXXXXXXSVRKRLYGDYYARDHDPKWDVKTSSFSRLLF 832
            VPP HFNGYL+GWP               SVRKRLYGDY+AR HDPKWDV   ++SRLLF
Sbjct: 194  VPPGHFNGYLEGWPYVFFFVYHYFFFFNVSVRKRLYGDYFARPHDPKWDVNLPTWSRLLF 253

Query: 833  CVGVMVGHWLAAFEGPELHLTPGGWSNVGILVLIMTTLFMQYHSTLYLAKYSEKVVVPTS 1012
              GVMVGHWLAAFEGPELHL PGGWSN+GI  LI+TTL MQY++TLYLAKYSE VV PT+
Sbjct: 254  STGVMVGHWLAAFEGPELHLIPGGWSNLGIWALIITTLLMQYNATLYLAKYSENVVEPTA 313

Query: 1013 VVQFGPYRWVRHPIYASVMLLFSTYCIALRAPLSLLFVVAVCVVYFEQKVKLEEHLMIET 1192
            VVQFGPYRWVRHPIY+S MLLF TYCIALRAPLSLLF++AVC++Y++QK + EE LM+ET
Sbjct: 314  VVQFGPYRWVRHPIYSSTMLLFVTYCIALRAPLSLLFILAVCLLYYKQKAEREEDLMVET 373

Query: 1193 FGERYTEYMNKVRYKFIPFLY 1255
            FG+ YTEY +KV+YK IPF+Y
Sbjct: 374  FGQSYTEYASKVKYKLIPFIY 394


>ref|XP_002314167.1| predicted protein [Populus trichocarpa] gi|222850575|gb|EEE88122.1|
            predicted protein [Populus trichocarpa]
          Length = 405

 Score =  463 bits (1191), Expect = e-128
 Identities = 235/403 (58%), Positives = 276/403 (68%), Gaps = 31/403 (7%)
 Frame = +2

Query: 140  TTSLFLHSPPIINPISLST----RKCSLRHFVRH-------------HNVHPNVASFNKP 268
            TTS+ LHS  I    ++S     RK S RH  +H              N+ P     N P
Sbjct: 3    TTSVLLHSKTIPFSFTISINNRKRKLSFRHHNKHLQSHLSNTSVLSGQNLKPIKNPLNPP 62

Query: 269  FSVSPSQHFFK-----------CSYSSNTSSLPEFENPVTKTFTSVK-EALKDS--KLTP 406
            FS+  S    K           CSYS   S+     +   K   ++  E LK +  +LTP
Sbjct: 63   FSLYLSTSSLKITGTHLLSPPKCSYSGAVSTEGLQTHQFLKPLKNLSLEKLKATLLQLTP 122

Query: 407  FDVCKWTGVFCVVIAAIKWAVGVFFNPFFWMYFSWTWLFWPYFLAIALGVYGIYCQRKHS 586
             D+ KW+ +    IAA KW V +  NPFFWMYFSWTWLFWP+F+AI+L VYG+YC  KHS
Sbjct: 123  VDIIKWSAILSAAIAATKWTVNLVINPFFWMYFSWTWLFWPWFVAISLAVYGLYCFYKHS 182

Query: 587  VGEANVFEQLVIVTSAFTWLTLVPPAHFNGYLQGWPXXXXXXXXXXXXXXXSVRKRLYGD 766
            +GEA++FEQL IVTS FTWLTLVPPAHF+GYLQGWP               SVRKRLYGD
Sbjct: 183  IGEASIFEQLAIVTSVFTWLTLVPPAHFSGYLQGWPFVFFLVYHYFFFFNVSVRKRLYGD 242

Query: 767  YYARDHDPKWDVKTSSFSRLLFCVGVMVGHWLAAFEGPELHLTPGGWSNVGILVLIMTTL 946
            YYAR HDPKWD+    + RLLFCVGVM GHWLAAFEGPELHL PGGW NVGI +LI+ TL
Sbjct: 243  YYARPHDPKWDLNPPRWCRLLFCVGVMAGHWLAAFEGPELHLIPGGWINVGIWILILATL 302

Query: 947  FMQYHSTLYLAKYSEKVVVPTSVVQFGPYRWVRHPIYASVMLLFSTYCIALRAPLSLLFV 1126
             MQY+ST YLAKYSEKVVVP++VVQFGPYRWVRHPIY+S +LLF TY IALRAPLSLLFV
Sbjct: 303  LMQYNSTFYLAKYSEKVVVPSAVVQFGPYRWVRHPIYSSTLLLFVTYFIALRAPLSLLFV 362

Query: 1127 VAVCVVYFEQKVKLEEHLMIETFGERYTEYMNKVRYKFIPFLY 1255
            VAVC++Y+ QK K+EE LMIETFGE+Y EYM+KV+YKFIP +Y
Sbjct: 363  VAVCLMYYAQKAKMEEGLMIETFGEKYLEYMSKVQYKFIPLVY 405


>ref|XP_003545779.1| PREDICTED: uncharacterized protein LOC100814215 [Glycine max]
          Length = 394

 Score =  461 bits (1187), Expect = e-127
 Identities = 228/379 (60%), Positives = 278/379 (73%), Gaps = 22/379 (5%)
 Frame = +2

Query: 185  SLSTRKCSLRHFVRHHNV-----HPNVASFN------KPFS--VSPSQ---HFF---KCS 307
            S+ + K SLR F +H +       P   SF        PFS  + P++   +F    +CS
Sbjct: 18   SIVSNKVSLRPFDKHFHADVLANRPKSISFQLNCSYGNPFSSVLKPARKRANFLPSPRCS 77

Query: 308  YSSNTSSLPEFENPVTKTFTSVK-EALKDS--KLTPFDVCKWTGVFCVVIAAIKWAVGVF 478
             SS+ S+  E +NPV + F +V  +++K +  +LTP DV KW+G+ C++ AA KW + + 
Sbjct: 78   ISSSAST--ESQNPVLEFFRNVPFDSIKATLLQLTPIDVVKWSGILCIIAAATKWTMNML 135

Query: 479  FNPFFWMYFSWTWLFWPYFLAIALGVYGIYCQRKHSVGEANVFEQLVIVTSAFTWLTLVP 658
            F+PFFWMYFSWTWLFWP+ +AI L VYG+YC RKH   EAN+FEQL IVTS FTWLTLVP
Sbjct: 136  FSPFFWMYFSWTWLFWPWMVAIGLAVYGLYCFRKHLHSEANIFEQLAIVTSVFTWLTLVP 195

Query: 659  PAHFNGYLQGWPXXXXXXXXXXXXXXXSVRKRLYGDYYARDHDPKWDVKTSSFSRLLFCV 838
            P HFNGYL+GWP               SVRKRLYGDY+A+ HDPKWDV    +SRLLF  
Sbjct: 196  PGHFNGYLEGWPYVFFFVYHYFFFFNVSVRKRLYGDYFAQPHDPKWDVNLPMWSRLLFST 255

Query: 839  GVMVGHWLAAFEGPELHLTPGGWSNVGILVLIMTTLFMQYHSTLYLAKYSEKVVVPTSVV 1018
            GVMVGHWLAAFEGPELHL PGGWSN+GI  LI+TTL MQY++TLYLAKYSE VV PTSVV
Sbjct: 256  GVMVGHWLAAFEGPELHLIPGGWSNLGIWALIITTLLMQYNATLYLAKYSENVVEPTSVV 315

Query: 1019 QFGPYRWVRHPIYASVMLLFSTYCIALRAPLSLLFVVAVCVVYFEQKVKLEEHLMIETFG 1198
            QFGPYRWVRHPIY+S MLLF TYCIALRAPLSLLF+VAVC++Y++QK + EE LM+ETFG
Sbjct: 316  QFGPYRWVRHPIYSSTMLLFVTYCIALRAPLSLLFIVAVCLLYYKQKAEKEEDLMVETFG 375

Query: 1199 ERYTEYMNKVRYKFIPFLY 1255
            + YTEY +KV+YK IPF+Y
Sbjct: 376  QSYTEYASKVKYKLIPFIY 394


Top