BLASTX nr result

ID: Coptis21_contig00012245 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012245
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD45873.1| hypothetical protein [Oryza sativa Japonica Grou...    56   3e-06

>dbj|BAD45873.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|125556375|gb|EAZ01981.1| hypothetical protein
           OsI_24015 [Oryza sativa Indica Group]
           gi|125598138|gb|EAZ37918.1| hypothetical protein
           OsJ_22268 [Oryza sativa Japonica Group]
          Length = 71

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 21/40 (52%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
 Frame = -3

Query: 288 RFSMRIQCEDFQDCNHFCTTVAGY-QRGRCEPPFYQYCCC 172
           +F  R +CED +DC+++C T  GY Q G+C PP YQ+CCC
Sbjct: 30  KFVCRGKCEDIRDCDNWCKTAGGYPQGGQCVPPLYQFCCC 69


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