BLASTX nr result

ID: Coptis21_contig00012167 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012167
         (1284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313215.1| predicted protein [Populus trichocarpa] gi|2...   113   9e-23
emb|CAN78662.1| hypothetical protein VITISV_041960 [Vitis vinifera]   112   3e-22
ref|XP_003608370.1| DUF593-containing protein [Medicago truncatu...   107   7e-21
ref|XP_002518341.1| conserved hypothetical protein [Ricinus comm...   107   9e-21
ref|XP_003593287.1| DUF593-containing protein [Medicago truncatu...   107   9e-21

>ref|XP_002313215.1| predicted protein [Populus trichocarpa] gi|222849623|gb|EEE87170.1|
           predicted protein [Populus trichocarpa]
          Length = 253

 Score =  113 bits (283), Expect = 9e-23
 Identities = 84/253 (33%), Positives = 128/253 (50%), Gaps = 1/253 (0%)
 Frame = -3

Query: 889 GFKVLYLDCYYNGLVQFLDNFRGKADDFRHGFCSSIDVCGICYSKISSCKVGILNLLDNS 710
           G + L    +   LVQFL  F G++ D ++GFCS +D   +C +KI SC       L+NS
Sbjct: 18  GLRFLQFTWHGKSLVQFLCGFSGESSDPKNGFCSKLDFDKLCDTKIPSC-------LENS 70

Query: 709 VPDLKNPVRNKEISIVVEETSILNXXXXXXXXXXXXXXXXXXXXXXXERDLQALRKAIRI 530
                   +N++ S+  +E  ++N                         D+ ALR+ ++I
Sbjct: 71  ------KAKNEDSSMTRKE--VVNDGVLDDDDCEREYSVEDEEY-----DVTALRRLVKI 117

Query: 529 QRERVRNACLELEKERLXXXXXANETMAMIMRLQSELSSIQMQANQYQRMAEQKQLHDQE 350
           +R R   A  ELEKER+     A+E MAMI+RLQ+E SS +++A QY+++AEQKQ   QE
Sbjct: 118 ERLRADMAYAELEKERMASASAADEAMAMILRLQNEKSSTEIEAKQYRQLAEQKQEFLQE 177

Query: 349 VIHSLRWIVLKQESERSILESQLNLCKQGRMMDWNAGDEDGLEGIDCTPNRFSASSGGDL 170
           VI SL+W ++  E ERS +E  L L ++       + + D  E      N   ++    +
Sbjct: 178 VIESLQWDIINLEHERSEMEENLRLYREKLRQYVKSDEVDQFEASGARMNYLRSAMEDGI 237

Query: 169 AEELISSLD-MDS 134
            +    SLD MDS
Sbjct: 238 EDVPNLSLDNMDS 250


>emb|CAN78662.1| hypothetical protein VITISV_041960 [Vitis vinifera]
          Length = 288

 Score =  112 bits (279), Expect = 3e-22
 Identities = 91/270 (33%), Positives = 132/270 (48%), Gaps = 1/270 (0%)
 Frame = -3

Query: 940 NFAAFGNMLLLFFILVLGFKVLYLDCYYNGLVQFLDNFRGKADDFRHGFCSSIDVCGICY 761
           N +   N L LF  L LGFKVL     + GL+Q    F  K+   ++GF S   +  +C 
Sbjct: 33  NVSLVCNHLGLFLXLGLGFKVLPCVHRFKGLIQIFREFGAKSSVLKNGFYSRSGIDEVCG 92

Query: 760 SKISSCKVGILNLLDNSVPD-LKNPVRNKEISIVVEETSILNXXXXXXXXXXXXXXXXXX 584
           + + S K G L LL NS P  + N V +K   ++V++ S                     
Sbjct: 93  TNVLSXKWGALKLLMNSNPPRIDNFVESK---VLVKDVS-------EEXDDDGGGEEKEC 142

Query: 583 XXXXXERDLQALRKAIRIQRERVRNACLELEKERLXXXXXANETMAMIMRLQSELSSIQM 404
                E D+  LRK I+++R R   A LELEKER+       E MA I+ L++E +SI++
Sbjct: 143 YVEDDEIDVIELRKLIKLERNRANAAVLELEKERVAAASAVEELMAKILCLKNEKNSIEI 202

Query: 403 QANQYQRMAEQKQLHDQEVIHSLRWIVLKQESERSILESQLNLCKQGRMMDWNAGDEDGL 224
           Q+NQ +R+AE KQ +D EVI  L+WI++  E +      +L+   +   MD   GD    
Sbjct: 203 QSNQNRRLAELKQQYDDEVIRYLKWIIMNLEDQLEFCGEKLDSHGKDNEMDQYGGD---- 258

Query: 223 EGIDCTPNRFSASSGGDLAEELISSLDMDS 134
              D +  R     G D  + LISSL+  S
Sbjct: 259 --ADASYIRSRVKDGRD--DVLISSLERHS 284


>ref|XP_003608370.1| DUF593-containing protein [Medicago truncatula]
            gi|165881783|gb|ABY71162.1| DUF593-containing protein 2
            [Medicago truncatula] gi|355509425|gb|AES90567.1|
            DUF593-containing protein [Medicago truncatula]
          Length = 454

 Score =  107 bits (267), Expect = 7e-21
 Identities = 91/302 (30%), Positives = 142/302 (47%)
 Frame = -3

Query: 1039 FLAFFLVLMMDYGSSLNFSSKNTDFVGGVFMFGNFAAFGNMLLLFFILVLGFKVLYLDCY 860
            FL    + +M+    LNF    T F     +    +   N L +F +L   FK+L+   +
Sbjct: 157  FLLHQRLPLMNLALPLNFL---TQFGCSFVLLSCLSRLLNFLGMFLMLGFCFKILHFGWH 213

Query: 859  YNGLVQFLDNFRGKADDFRHGFCSSIDVCGICYSKISSCKVGILNLLDNSVPDLKNPVRN 680
            + G ++FL +F G+    R   C    V  +   KI S + G  +   NS    ++ V  
Sbjct: 214  FKGALRFLCDF-GRMPTIR--LCLENIVLEVSKKKIPSLENGS-DPNTNSSTQKRSNVAG 269

Query: 679  KEISIVVEETSILNXXXXXXXXXXXXXXXXXXXXXXXERDLQALRKAIRIQRERVRNACL 500
            + ++  +E+ S                            D   LRK I+I+R +   A  
Sbjct: 270  ERLNGRLEDRSERKDDSEMQVPDVDEVF-----------DAMTLRKLIKIERRKANAAFA 318

Query: 499  ELEKERLXXXXXANETMAMIMRLQSELSSIQMQANQYQRMAEQKQLHDQEVIHSLRWIVL 320
            EL+KER+     A E MAMI+RLQSE SS ++QANQ++RMAEQK  +D EVI SL W + 
Sbjct: 319  ELDKERIAASSSAEEAMAMILRLQSEKSSAEIQANQFRRMAEQKLEYDDEVIESLEWTIT 378

Query: 319  KQESERSILESQLNLCKQGRMMDWNAGDEDGLEGIDCTPNRFSASSGGDLAEELISSLDM 140
            + ES RS+LE QL + ++          EDG+  ++   +R   S   +  + ++SS + 
Sbjct: 379  RHESHRSVLEEQLRVYREELKQYLG---EDGINQLEADVSR-DRSFENEAVDSVVSSSEN 434

Query: 139  DS 134
             S
Sbjct: 435  GS 436


>ref|XP_002518341.1| conserved hypothetical protein [Ricinus communis]
           gi|223542561|gb|EEF44101.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 256

 Score =  107 bits (266), Expect = 9e-21
 Identities = 54/110 (49%), Positives = 82/110 (74%)
 Frame = -3

Query: 562 DLQALRKAIRIQRERVRNACLELEKERLXXXXXANETMAMIMRLQSELSSIQMQANQYQR 383
           D+ ALR+ ++I+R+R   A LELEKER+     A+E MAMI+RLQ E S I+++++ + +
Sbjct: 32  DVMALRRLVKIERQRADMANLELEKERMASASAADEAMAMILRLQREKSCIEIESSHHYK 91

Query: 382 MAEQKQLHDQEVIHSLRWIVLKQESERSILESQLNLCKQGRMMDWNAGDE 233
           +AEQ Q +DQEVI SL+WI++K ESER++LE +L+LCKQ ++  +   DE
Sbjct: 92  LAEQMQEYDQEVIQSLQWIIVKYESERTVLEEKLSLCKQ-KLKQYMKSDE 140


>ref|XP_003593287.1| DUF593-containing protein [Medicago truncatula]
            gi|165881781|gb|ABY71161.1| DUF593-containing protein 1
            [Medicago truncatula] gi|355482335|gb|AES63538.1|
            DUF593-containing protein [Medicago truncatula]
          Length = 272

 Score =  107 bits (266), Expect = 9e-21
 Identities = 94/321 (29%), Positives = 149/321 (46%), Gaps = 12/321 (3%)
 Frame = -3

Query: 1084 MQILGVLFCFLVQL---------KFLAFFL--VLMMDYGSSLNFSSKNTDFVGGVFMFGN 938
            MQ LG  FC L+ L         KFL F L   L MD+ S+ NF ++ ++   G+ + G 
Sbjct: 4    MQTLG-RFCLLIFLHHSVLGIYHKFLRFSLRFFLFMDFPSTFNFLTQASELGCGIVLLGY 62

Query: 937  FAAFGNMLLLFFILVLGFKVLYLDCYYNGLVQFLDNFRGKADDFRHGFCSSIDVCGICYS 758
            F+   N++                    GLV                      + GIC+ 
Sbjct: 63   FSRIFNLI--------------------GLVL---------------------IFGICFK 81

Query: 757  KISSCKVGILNLLDNSVPDLKNPVRNKEISIVVEETSILNXXXXXXXXXXXXXXXXXXXX 578
                    IL   D   P L+ P +     +V  +T + +                    
Sbjct: 82   --------ILRFSDT--PRLRKPQK-----VVNLDTQLKSNVKYDDGLVGLDMKDMDGGL 126

Query: 577  XXXERDLQALRKAIRIQRERVRNACLELEKERLXXXXXANETMAMIMRLQSELSSIQMQA 398
                 D+ +LRK ++++RER   AC E+EKER+     A E MAMI+RLQ+E SS++++A
Sbjct: 127  EDEVFDVMSLRKLVKMERERYVAACAEIEKERVAASSAAEEAMAMILRLQNEKSSVEIEA 186

Query: 397  NQYQRMAEQKQLHDQEVIHSLRWIVLKQESERSILESQLNLCKQGRMMDWNAGDE-DGLE 221
            NQ++RM E++Q +D EVI SLRW V++ ES+++ LE +L + K+ ++ ++   DE + +E
Sbjct: 187  NQFRRMVEERQEYDHEVIESLRWDVVQLESQKTFLEEELGIFKE-KLREFMRDDEIELIE 245

Query: 220  GIDCTPNRFSASSGGDLAEEL 158
            G D      + S   DL + L
Sbjct: 246  GADFAREFCNFSVEYDLDDSL 266


Top