BLASTX nr result

ID: Coptis21_contig00011909 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011909
         (1061 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_187413.1| uncharacterized protein [Arabidopsis thaliana] ...   281   3e-73
ref|XP_002882536.1| hypothetical protein ARALYDRAFT_478080 [Arab...   278   1e-72
ref|NP_001189835.1| uncharacterized protein [Arabidopsis thalian...   277   4e-72
ref|NP_001030658.1| uncharacterized protein [Arabidopsis thalian...   276   6e-72
gb|AAF13074.1|AC009176_1 unknown protein, 5' partial [Arabidopsi...   273   4e-71

>ref|NP_187413.1| uncharacterized protein [Arabidopsis thaliana]
           gi|27754217|gb|AAO22562.1| unknown protein [Arabidopsis
           thaliana] gi|332641041|gb|AEE74562.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 258

 Score =  281 bits (718), Expect = 3e-73
 Identities = 136/209 (65%), Positives = 171/209 (81%), Gaps = 1/209 (0%)
 Frame = +1

Query: 94  ALKHSPEPGLSSKWTSEEQTILDEGLIKYASEIPMARYTMIAASLHDKTVRDVALRCRWM 273
           AL+H+P  G+S+ WT EEQ++L++ L+KYA+E  + RY  IA  + DKTVRDVALRCRWM
Sbjct: 55  ALRHNP--GISTDWTLEEQSLLEDLLVKYATEPSVFRYAKIAMKMKDKTVRDVALRCRWM 112

Query: 274 TKKESGKRRKED-MSRKSKDKKERTTDPSVKSSAHLAIRPSVPTYAPPMIPVDNDDGISY 450
           TKKE+GKRRKED  SRKSKDKKE+ TD S KSS+HL + P+ P+YAPPM+P+D DDGISY
Sbjct: 113 TKKENGKRRKEDHSSRKSKDKKEKATDSSAKSSSHLNVHPNGPSYAPPMMPIDTDDGISY 172

Query: 451 QAIGGPTGHLLEQNAQVFEQISANFATLQIHDVHKNINLFCQTRDNILTIMNDLNDMPGI 630
           +AIGG +G LLEQNAQ+F Q+S NF+  Q+H+   N+N+ C+ RDNIL I+NDLNDMP +
Sbjct: 173 KAIGGVSGDLLEQNAQMFNQLSTNFSAFQLHE---NVNILCKARDNILAILNDLNDMPEV 229

Query: 631 MKQMPPLPVKVNEELANSILPRPTRPMQS 717
           MKQMPPLPVK+NEELANSILPRP+   +S
Sbjct: 230 MKQMPPLPVKLNEELANSILPRPSHQRKS 258


>ref|XP_002882536.1| hypothetical protein ARALYDRAFT_478080 [Arabidopsis lyrata subsp.
           lyrata] gi|297328376|gb|EFH58795.1| hypothetical protein
           ARALYDRAFT_478080 [Arabidopsis lyrata subsp. lyrata]
          Length = 251

 Score =  278 bits (712), Expect = 1e-72
 Identities = 137/210 (65%), Positives = 172/210 (81%), Gaps = 2/210 (0%)
 Frame = +1

Query: 94  ALKHSPEPGLSSKWTSEEQTILDEGLIKYASEIPMARYTMIAASLHDKTVRDVALRCRWM 273
           AL+H+P  G+S+ WT EEQ++L++ L+KYA+E  + RY  IA  + DKTVRDVALRCRWM
Sbjct: 47  ALRHNP--GISTDWTHEEQSLLEDLLVKYATEPSVFRYAKIAMKMKDKTVRDVALRCRWM 104

Query: 274 TKKESGKRRKED-MSRKSKDKK-ERTTDPSVKSSAHLAIRPSVPTYAPPMIPVDNDDGIS 447
           TKKE+GKRRKED  SRKSKDKK E+ TD S KSS+HL + P+ P+YAPPM+P+D DDGIS
Sbjct: 105 TKKENGKRRKEDHSSRKSKDKKQEKATDSSAKSSSHLNVHPNGPSYAPPMMPIDTDDGIS 164

Query: 448 YQAIGGPTGHLLEQNAQVFEQISANFATLQIHDVHKNINLFCQTRDNILTIMNDLNDMPG 627
           Y+AIGG +G LLEQNAQ+F Q+S+NF+  Q+H+   N+N+ C+ RDNIL I+NDLNDMP 
Sbjct: 165 YKAIGGVSGDLLEQNAQMFNQVSSNFSAFQLHE---NVNILCKARDNILAILNDLNDMPE 221

Query: 628 IMKQMPPLPVKVNEELANSILPRPTRPMQS 717
           +MKQMPPLPVKVNEELANSILPRP+   +S
Sbjct: 222 VMKQMPPLPVKVNEELANSILPRPSHQRKS 251


>ref|NP_001189835.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332641044|gb|AEE74565.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 268

 Score =  277 bits (708), Expect = 4e-72
 Identities = 137/216 (63%), Positives = 173/216 (80%), Gaps = 8/216 (3%)
 Frame = +1

Query: 94  ALKHSPEPGLSSKWTSEEQTILDEGLIKYASEIPMARYTMIAASLHDKTVRDVALRCRWM 273
           AL+H+P  G+S+ WT EEQ++L++ L+KYA+E  + RY  IA  + DKTVRDVALRCRWM
Sbjct: 55  ALRHNP--GISTDWTLEEQSLLEDLLVKYATEPSVFRYAKIAMKMKDKTVRDVALRCRWM 112

Query: 274 TKKESGKRRKED-MSRKSKDKK-ERTTDPSVKSSAHLAIRPSVPTYAPPMIPVDNDDGIS 447
           TKKE+GKRRKED  SRKSKDKK E+ TD S KSS+HL + P+ P+YAPPM+P+D DDGIS
Sbjct: 113 TKKENGKRRKEDHSSRKSKDKKQEKATDSSAKSSSHLNVHPNGPSYAPPMMPIDTDDGIS 172

Query: 448 YQAIGGPTGHLLEQNAQVFEQISANFATLQI------HDVHKNINLFCQTRDNILTIMND 609
           Y+AIGG +G LLEQNAQ+F Q+S NF+  Q+      H +H+N+N+ C+ RDNIL I+ND
Sbjct: 173 YKAIGGVSGDLLEQNAQMFNQLSTNFSAFQVNSTSTFHLLHENVNILCKARDNILAILND 232

Query: 610 LNDMPGIMKQMPPLPVKVNEELANSILPRPTRPMQS 717
           LNDMP +MKQMPPLPVK+NEELANSILPRP+   +S
Sbjct: 233 LNDMPEVMKQMPPLPVKLNEELANSILPRPSHQRKS 268


>ref|NP_001030658.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332641043|gb|AEE74564.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 259

 Score =  276 bits (706), Expect = 6e-72
 Identities = 136/210 (64%), Positives = 171/210 (81%), Gaps = 2/210 (0%)
 Frame = +1

Query: 94  ALKHSPEPGLSSKWTSEEQTILDEGLIKYASEIPMARYTMIAASLHDKTVRDVALRCRWM 273
           AL+H+P  G+S+ WT EEQ++L++ L+KYA+E  + RY  IA  + DKTVRDVALRCRWM
Sbjct: 55  ALRHNP--GISTDWTLEEQSLLEDLLVKYATEPSVFRYAKIAMKMKDKTVRDVALRCRWM 112

Query: 274 TKKESGKRRKED-MSRKSKDKK-ERTTDPSVKSSAHLAIRPSVPTYAPPMIPVDNDDGIS 447
           TKKE+GKRRKED  SRKSKDKK E+ TD S KSS+HL + P+ P+YAPPM+P+D DDGIS
Sbjct: 113 TKKENGKRRKEDHSSRKSKDKKQEKATDSSAKSSSHLNVHPNGPSYAPPMMPIDTDDGIS 172

Query: 448 YQAIGGPTGHLLEQNAQVFEQISANFATLQIHDVHKNINLFCQTRDNILTIMNDLNDMPG 627
           Y+AIGG +G LLEQNAQ+F Q+S NF+  Q+H+   N+N+ C+ RDNIL I+NDLNDMP 
Sbjct: 173 YKAIGGVSGDLLEQNAQMFNQLSTNFSAFQLHE---NVNILCKARDNILAILNDLNDMPE 229

Query: 628 IMKQMPPLPVKVNEELANSILPRPTRPMQS 717
           +MKQMPPLPVK+NEELANSILPRP+   +S
Sbjct: 230 VMKQMPPLPVKLNEELANSILPRPSHQRKS 259


>gb|AAF13074.1|AC009176_1 unknown protein, 5' partial [Arabidopsis thaliana]
          Length = 197

 Score =  273 bits (699), Expect = 4e-71
 Identities = 131/200 (65%), Positives = 164/200 (82%), Gaps = 1/200 (0%)
 Frame = +1

Query: 121 LSSKWTSEEQTILDEGLIKYASEIPMARYTMIAASLHDKTVRDVALRCRWMTKKESGKRR 300
           +S+ WT EEQ++L++ L+KYA+E  + RY  IA  + DKTVRDVALRCRWMTKKE+GKRR
Sbjct: 1   ISTDWTLEEQSLLEDLLVKYATEPSVFRYAKIAMKMKDKTVRDVALRCRWMTKKENGKRR 60

Query: 301 KED-MSRKSKDKKERTTDPSVKSSAHLAIRPSVPTYAPPMIPVDNDDGISYQAIGGPTGH 477
           KED  SRKSKDKKE+ TD S KSS+HL + P+ P+YAPPM+P+D DDGISY+AIGG +G 
Sbjct: 61  KEDHSSRKSKDKKEKATDSSAKSSSHLNVHPNGPSYAPPMMPIDTDDGISYKAIGGVSGD 120

Query: 478 LLEQNAQVFEQISANFATLQIHDVHKNINLFCQTRDNILTIMNDLNDMPGIMKQMPPLPV 657
           LLEQNAQ+F Q+S NF+  Q+H+   N+N+ C+ RDNIL I+NDLNDMP +MKQMPPLPV
Sbjct: 121 LLEQNAQMFNQLSTNFSAFQLHE---NVNILCKARDNILAILNDLNDMPEVMKQMPPLPV 177

Query: 658 KVNEELANSILPRPTRPMQS 717
           K+NEELANSILPRP+   +S
Sbjct: 178 KLNEELANSILPRPSHQRKS 197


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