BLASTX nr result

ID: Coptis21_contig00011884 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011884
         (1442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525175.1| PREDICTED: putative 1-aminocyclopropane-1-ca...   577   e-162
ref|XP_002263358.1| PREDICTED: putative 1-aminocyclopropane-1-ca...   575   e-162
ref|NP_001234368.1| D-cysteine desulfhydrase [Solanum lycopersic...   570   e-160
gb|ACL52405.1| unknown [Zea mays]                                     568   e-159
ref|NP_001130254.1| hypothetical protein [Zea mays] gi|194688676...   568   e-159

>ref|XP_003525175.1| PREDICTED: putative 1-aminocyclopropane-1-carboxylate deaminase-like
            [Glycine max]
          Length = 379

 Score =  577 bits (1488), Expect = e-162
 Identities = 276/373 (73%), Positives = 316/373 (84%), Gaps = 1/373 (0%)
 Frame = +2

Query: 110  FGFLTQKPYSPPSWAQHLHPIPSHVFSLAHVPTPIHRWNLPNLPKNVEVWIKRDDLTGMQ 289
            F FLT+KPYSPPSWA HLHP+PSH FSLAH+PTPIHRWNLPNLP N E+WIKRDDL+GMQ
Sbjct: 7    FEFLTKKPYSPPSWASHLHPLPSHFFSLAHLPTPIHRWNLPNLPTNTELWIKRDDLSGMQ 66

Query: 290  LSGNKVRKLEFLMAEAVAQGADCIITIGGIQSNHCRATAVAAKYLNLDCYLILRTSKILV 469
            LSGNKVRKLEFLMA+A+AQGAD IITIGGIQSNHCRATAVAAKYLNLDC+LILRTS +LV
Sbjct: 67   LSGNKVRKLEFLMADAIAQGADSIITIGGIQSNHCRATAVAAKYLNLDCFLILRTSDLLV 126

Query: 470  DNDPGLTGNLLVERLVGAHVDLVSKEEYANTGSEVLTNLLKERLIREGKRPYVIPVGGSN 649
            D DPGLTGNLLVER+VGAHV L+SK+EYA  GS  LTN+LKE+LI+EG+RPYVIPVGGSN
Sbjct: 127  DQDPGLTGNLLVERMVGAHVHLISKQEYAKIGSVTLTNVLKEKLIKEGRRPYVIPVGGSN 186

Query: 650  SLGTWGYIEAVREIEEQLHIAP-SIEFQDIVVACXXXXXXXXXXXXXXXXXXXXXVHAFS 826
            SLGTWGYIEAVREIE+Q+     +++F DIVVAC                     VHAFS
Sbjct: 187  SLGTWGYIEAVREIEQQIQKGTGNVKFDDIVVACGSGGTIAGLSLGSSLSALKARVHAFS 246

Query: 827  VCDDPDYFYKYVQGLLDGLNAGVSSRDIVDIQDAKGLGYAMNTIKELEFVKEIAAATGIV 1006
            VCDDPDYF+ + QGLLDGL AGVSSRDIV IQ+AKGLGYAMNT +EL FVKE+AA TG+V
Sbjct: 247  VCDDPDYFHNFAQGLLDGLKAGVSSRDIVHIQNAKGLGYAMNTSEELNFVKEVAATTGVV 306

Query: 1007 LDPVYSGKAAFRLLKDMNDNPAMWEGRKVLFIHTGGLLGLYEKTEQITPMMANWRRMDIA 1186
            LDPVYSGKAA+ +LKDM++NP  WE RK+LFIHTGGLLGLY+K +Q+   + NW+RMD+ 
Sbjct: 307  LDPVYSGKAAYAMLKDMSENPKKWERRKILFIHTGGLLGLYDKVDQLASFVGNWQRMDVN 366

Query: 1187 ESVPRKDGVGKMF 1225
            ESVPR+DG+GKMF
Sbjct: 367  ESVPRQDGIGKMF 379


>ref|XP_002263358.1| PREDICTED: putative 1-aminocyclopropane-1-carboxylate deaminase
            [Vitis vinifera] gi|296088811|emb|CBI38261.3| unnamed
            protein product [Vitis vinifera]
          Length = 381

 Score =  575 bits (1483), Expect = e-162
 Identities = 275/377 (72%), Positives = 318/377 (84%), Gaps = 1/377 (0%)
 Frame = +2

Query: 98   EQTTFGFLTQKPYSPPSWAQHLHPIPSHVFSLAHVPTPIHRWNLPNLPKNVEVWIKRDDL 277
            +Q +F FLT+KPY+PPSWA HL PIPSHVFSLAHVPTPIH+WNLPNLPKN ++WIKRDDL
Sbjct: 5    KQLSFDFLTKKPYAPPSWASHLSPIPSHVFSLAHVPTPIHKWNLPNLPKNTQLWIKRDDL 64

Query: 278  TGMQLSGNKVRKLEFLMAEAVAQGADCIITIGGIQSNHCRATAVAAKYLNLDCYLILRTS 457
            +GMQ+SGNKVRKLEFLMA+AVAQG+DCIITIGGIQSNHCRATAVAAKYLNLDCYLILRTS
Sbjct: 65   SGMQMSGNKVRKLEFLMADAVAQGSDCIITIGGIQSNHCRATAVAAKYLNLDCYLILRTS 124

Query: 458  KILVDNDPGLTGNLLVERLVGAHVDLVSKEEYANTGSEVLTNLLKERLIREGKRPYVIPV 637
            K+LVD DPGLTGNLLVERL+GA ++LVSKEEYA  GS  LTNLLKERL++EG+RPYVIPV
Sbjct: 125  KVLVDKDPGLTGNLLVERLIGAQIELVSKEEYAKLGSVTLTNLLKERLLKEGRRPYVIPV 184

Query: 638  GGSNSLGTWGYIEAVREIEEQLHI-APSIEFQDIVVACXXXXXXXXXXXXXXXXXXXXXV 814
            GGSNSLGTWGYIEA+REIE+QL      + F DIVVAC                     V
Sbjct: 185  GGSNSLGTWGYIEAIREIEQQLPTGTDEVGFDDIVVACGSGATIAGLSLGSSLSKLNTKV 244

Query: 815  HAFSVCDDPDYFYKYVQGLLDGLNAGVSSRDIVDIQDAKGLGYAMNTIKELEFVKEIAAA 994
             AFSVCDDPDYFY YVQGLLDGL AGV S DIVDIQ+AKGLGYA+NT +EL F+KE+A +
Sbjct: 245  LAFSVCDDPDYFYDYVQGLLDGLQAGVRSHDIVDIQNAKGLGYAINTTEELNFLKEVAVS 304

Query: 995  TGIVLDPVYSGKAAFRLLKDMNDNPAMWEGRKVLFIHTGGLLGLYEKTEQITPMMANWRR 1174
            TG+VLDPVYSGKAA+ ++KDM +NP+ WEGR +LFIHTGGLLGLY+K EQ+  ++  W +
Sbjct: 305  TGVVLDPVYSGKAAYGMIKDMAENPSKWEGRNILFIHTGGLLGLYDKVEQMGSLVGKWCK 364

Query: 1175 MDIAESVPRKDGVGKMF 1225
            M+I +S+PRKDG+GKMF
Sbjct: 365  MNIDDSIPRKDGIGKMF 381


>ref|NP_001234368.1| D-cysteine desulfhydrase [Solanum lycopersicum]
            gi|186920269|gb|ACC95419.1| D-cysteine desulfhydrase
            [Solanum lycopersicum]
          Length = 425

 Score =  570 bits (1468), Expect = e-160
 Identities = 268/387 (69%), Positives = 318/387 (82%), Gaps = 1/387 (0%)
 Frame = +2

Query: 68   SSPMEKHNGPEQTTFGFLTQKPYSPPSWAQHLHPIPSHVFSLAHVPTPIHRWNLPNLPKN 247
            SS  +  +   Q+ F FLT+KPY PP WA  L PIPSH FSL H PTPIH+WNLPNLPKN
Sbjct: 39   SSMEDSSSQGHQSAFQFLTKKPYEPPPWASLLSPIPSHTFSLGHFPTPIHKWNLPNLPKN 98

Query: 248  VEVWIKRDDLTGMQLSGNKVRKLEFLMAEAVAQGADCIITIGGIQSNHCRATAVAAKYLN 427
             EVW+KRDD++GMQLSGNKVRKLEFL+A+AVAQGADCI+TIGGIQSNHCRATAVAAKYLN
Sbjct: 99   TEVWLKRDDMSGMQLSGNKVRKLEFLLADAVAQGADCIVTIGGIQSNHCRATAVAAKYLN 158

Query: 428  LDCYLILRTSKILVDNDPGLTGNLLVERLVGAHVDLVSKEEYANTGSEVLTNLLKERLIR 607
            LDCYLILRTSK+LVD DPGLTGNLLV+RLVGAH+DLVSKEEYA  G E LT +LKE+L+ 
Sbjct: 159  LDCYLILRTSKLLVDKDPGLTGNLLVDRLVGAHIDLVSKEEYAKVGGEALTKILKEKLLN 218

Query: 608  EGKRPYVIPVGGSNSLGTWGYIEAVREIEEQL-HIAPSIEFQDIVVACXXXXXXXXXXXX 784
            EG++PYVIPVGGSNSLGTWGYIEA+RE+E+QL H++   +F DIVVAC            
Sbjct: 219  EGRKPYVIPVGGSNSLGTWGYIEAIRELEQQLQHLSIEQKFDDIVVACGSGGTVAGLSIA 278

Query: 785  XXXXXXXXXVHAFSVCDDPDYFYKYVQGLLDGLNAGVSSRDIVDIQDAKGLGYAMNTIKE 964
                     ++AF VCDDPDYFY+YVQGLLDG+ AGVSSRDIV I+ AKGLGYA++T  E
Sbjct: 279  SMLSGLKAKINAFCVCDDPDYFYEYVQGLLDGITAGVSSRDIVSIKTAKGLGYALSTTDE 338

Query: 965  LEFVKEIAAATGIVLDPVYSGKAAFRLLKDMNDNPAMWEGRKVLFIHTGGLLGLYEKTEQ 1144
            L+FVK++A  TG++LDPVYSGKAA+ ++KDM +NP  WEGRK+LFIHTGGLLGLY+K ++
Sbjct: 339  LKFVKQVAETTGVILDPVYSGKAAYGMMKDMGENPTKWEGRKILFIHTGGLLGLYDKADE 398

Query: 1145 ITPMMANWRRMDIAESVPRKDGVGKMF 1225
            I  +M  WR+MDI ES+PR+DG+GKMF
Sbjct: 399  IGSLMGKWRKMDINESIPRQDGIGKMF 425


>gb|ACL52405.1| unknown [Zea mays]
          Length = 395

 Score =  568 bits (1463), Expect = e-159
 Identities = 267/371 (71%), Positives = 311/371 (83%)
 Frame = +2

Query: 113  GFLTQKPYSPPSWAQHLHPIPSHVFSLAHVPTPIHRWNLPNLPKNVEVWIKRDDLTGMQL 292
            GFL++KPY+PP WA HL P+P H FSL H PTPIH+WNLPNLP+  EVWIKRDDL+GMQL
Sbjct: 25   GFLSKKPYAPPLWATHLSPMPCHTFSLGHFPTPIHKWNLPNLPEGTEVWIKRDDLSGMQL 84

Query: 293  SGNKVRKLEFLMAEAVAQGADCIITIGGIQSNHCRATAVAAKYLNLDCYLILRTSKILVD 472
            SGNKVRKLEFLMA+AVAQGADC+IT+GGIQSNHCRATAVAAKYLNLDCYLILRTSK+LVD
Sbjct: 85   SGNKVRKLEFLMADAVAQGADCVITVGGIQSNHCRATAVAAKYLNLDCYLILRTSKLLVD 144

Query: 473  NDPGLTGNLLVERLVGAHVDLVSKEEYANTGSEVLTNLLKERLIREGKRPYVIPVGGSNS 652
             DPGL GNLLVERLVGAHVDLVSKEEY   GS  L +LLK+RL+ EG++PYVIPVGGSNS
Sbjct: 145  KDPGLVGNLLVERLVGAHVDLVSKEEYGKIGSVALADLLKKRLLEEGRKPYVIPVGGSNS 204

Query: 653  LGTWGYIEAVREIEEQLHIAPSIEFQDIVVACXXXXXXXXXXXXXXXXXXXXXVHAFSVC 832
            LGTWGYIEA+REIE+Q+  +  ++F DIVVAC                     VHAFSVC
Sbjct: 205  LGTWGYIEAIREIEQQIQQSADVQFDDIVVACGSGGTIAGLALGSRLSSLNTKVHAFSVC 264

Query: 833  DDPDYFYKYVQGLLDGLNAGVSSRDIVDIQDAKGLGYAMNTIKELEFVKEIAAATGIVLD 1012
            DDP+YFY YVQGL+DGLN+G+ S DIV I++AKGLGYAMNT +EL+FVK+IAA+TGI+LD
Sbjct: 265  DDPEYFYDYVQGLIDGLNSGLDSHDIVSIENAKGLGYAMNTAEELKFVKDIAASTGIILD 324

Query: 1013 PVYSGKAAFRLLKDMNDNPAMWEGRKVLFIHTGGLLGLYEKTEQITPMMANWRRMDIAES 1192
            PVYSGKA + LLKDM  NPA W+GRKVLFIHTGGLLGLY+K +Q++ +  +WRRMD+ +S
Sbjct: 325  PVYSGKAVYGLLKDMAGNPAKWKGRKVLFIHTGGLLGLYDKADQLSSLAGSWRRMDLEDS 384

Query: 1193 VPRKDGVGKMF 1225
            VPR+DG GKMF
Sbjct: 385  VPRQDGTGKMF 395


>ref|NP_001130254.1| hypothetical protein [Zea mays] gi|194688676|gb|ACF78422.1| unknown
            [Zea mays] gi|413939136|gb|AFW73687.1| hypothetical
            protein ZEAMMB73_104591 [Zea mays]
          Length = 395

 Score =  568 bits (1463), Expect = e-159
 Identities = 268/371 (72%), Positives = 310/371 (83%)
 Frame = +2

Query: 113  GFLTQKPYSPPSWAQHLHPIPSHVFSLAHVPTPIHRWNLPNLPKNVEVWIKRDDLTGMQL 292
            GFL++KPY+PP WA HL P+P H FSL H PTPIH+WNLPNLP+  EVWIKRDDL+GMQL
Sbjct: 25   GFLSKKPYAPPLWATHLSPMPCHTFSLGHFPTPIHKWNLPNLPEGTEVWIKRDDLSGMQL 84

Query: 293  SGNKVRKLEFLMAEAVAQGADCIITIGGIQSNHCRATAVAAKYLNLDCYLILRTSKILVD 472
            SGNKVRKLEFLMA+AVAQGADC+IT+GGIQSNHCRATAVAAKYLNLDCYLILRTSK+LVD
Sbjct: 85   SGNKVRKLEFLMADAVAQGADCVITVGGIQSNHCRATAVAAKYLNLDCYLILRTSKLLVD 144

Query: 473  NDPGLTGNLLVERLVGAHVDLVSKEEYANTGSEVLTNLLKERLIREGKRPYVIPVGGSNS 652
             DPGL GNLLVERLVGAHVDLVSKEEY   GS  L +LLK+RL+ EG++PYVIPVGGSNS
Sbjct: 145  KDPGLVGNLLVERLVGAHVDLVSKEEYGKIGSVALADLLKKRLLEEGRKPYVIPVGGSNS 204

Query: 653  LGTWGYIEAVREIEEQLHIAPSIEFQDIVVACXXXXXXXXXXXXXXXXXXXXXVHAFSVC 832
            LGTWGYIEA+REIE+Q+  +  ++F DIVVAC                     VHAFSVC
Sbjct: 205  LGTWGYIEAIREIEQQIQQSSDVQFDDIVVACGSGGTIAGLALGSRLSSLNTKVHAFSVC 264

Query: 833  DDPDYFYKYVQGLLDGLNAGVSSRDIVDIQDAKGLGYAMNTIKELEFVKEIAAATGIVLD 1012
            DDP+YFY YVQGL+DGLN+G  S DIV +++AKGLGYAMNT +EL+FVK+IAA+TGIVLD
Sbjct: 265  DDPEYFYDYVQGLIDGLNSGFDSHDIVSMENAKGLGYAMNTAEELKFVKDIAASTGIVLD 324

Query: 1013 PVYSGKAAFRLLKDMNDNPAMWEGRKVLFIHTGGLLGLYEKTEQITPMMANWRRMDIAES 1192
            PVYSGKA + LLKDM  NPA W+GRKVLFIHTGGLLGLY+K +Q++ +  +WRRMD+ +S
Sbjct: 325  PVYSGKAVYGLLKDMAGNPAKWKGRKVLFIHTGGLLGLYDKADQLSSLAGSWRRMDLEDS 384

Query: 1193 VPRKDGVGKMF 1225
            VPRKDG GKMF
Sbjct: 385  VPRKDGTGKMF 395


Top