BLASTX nr result

ID: Coptis21_contig00011861 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011861
         (932 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17403.3| unnamed protein product [Vitis vinifera]              269   6e-70
ref|XP_003580239.1| PREDICTED: uncharacterized protein LOC100821...   259   6e-67
ref|XP_003580238.1| PREDICTED: uncharacterized protein LOC100821...   259   6e-67
dbj|BAJ95863.1| predicted protein [Hordeum vulgare subsp. vulgare]    258   1e-66
dbj|BAJ94998.1| predicted protein [Hordeum vulgare subsp. vulgare]    258   1e-66

>emb|CBI17403.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  269 bits (688), Expect = 6e-70
 Identities = 136/233 (58%), Positives = 176/233 (75%)
 Frame = -3

Query: 930  SIQSFVAGLKKRTKIQYENKLVDNQAQAGLKTDGSEKTVKGVGSDPVRVPHEMPSSWPLE 751
            S+ ++VAGLK+  K QYE +L D+Q ++  + + S K VK VG DP++     PS WP E
Sbjct: 738  SLNTYVAGLKEMAKFQYEERLADDQ-ESEPEANKSVKNVKDVGLDPIQDDLASPSRWPFE 796

Query: 750  FERQQMELIELWHICHVSLVHRTYFFLLFKGDPSDSVYMQVERRRLSFLKDLYSQRNFDK 571
            F+R Q E+IELWH C+VSLVHRTYFFLLF+GDP+DS+YM+VE RRLSFLKD +S+ N  +
Sbjct: 797  FKRLQKEIIELWHSCNVSLVHRTYFFLLFQGDPADSIYMEVELRRLSFLKDTFSRGN--Q 854

Query: 570  IAVKGSCDLTPASSMRALRREREMLCKQMNKKLSLEERERIYLRWSIGLKSKQRRVQLAR 391
              V G   LTPASS+RALRREREMLCKQM KKLS +ER  ++L+W + L +K RR+QLA 
Sbjct: 855  TVVDGHA-LTPASSVRALRREREMLCKQMQKKLSEDERMSLFLKWGVQLNAKNRRLQLAY 913

Query: 390  LLWTDTKDMDHVIESANIVAKLVGLPEPSLALKEMFTLSFAPQKKSRRSYSWR 232
             LWTDT+DM+H+ ESANIVA+L    +P  A KEMF L+F P++ SRRS+SW+
Sbjct: 914  RLWTDTEDMNHISESANIVARLTRFVQPEEAFKEMFGLNFTPRRMSRRSHSWK 966


>ref|XP_003580239.1| PREDICTED: uncharacterized protein LOC100821877 isoform 2
            [Brachypodium distachyon]
          Length = 885

 Score =  259 bits (662), Expect = 6e-67
 Identities = 130/233 (55%), Positives = 174/233 (74%), Gaps = 1/233 (0%)
 Frame = -3

Query: 927  IQSFVAGLKKRTKIQYENKLVDNQAQAGLKTDGSEKTVKGVGSDPVRVPHEMPSSWPLEF 748
            I  FVA LK+    QY+ +L   +    L    +E T++ VG DP+    + PS WPLEF
Sbjct: 652  IGEFVAELKEMA--QYQKQLGGQRGNGEL----AEGTIRSVGLDPIMDALQSPSRWPLEF 705

Query: 747  ERQQMELIELWHICHVSLVHRTYFFLLFKGDPSDSVYMQVERRRLSFLKDLYSQRNFDKI 568
            E++Q E+I+LWH C+ SLVHRTYFFLLFKGDP+DS+YM+VE RRLSFLKD YS+   +  
Sbjct: 706  EKKQQEIIDLWHACYASLVHRTYFFLLFKGDPADSIYMEVEIRRLSFLKDTYSKGGMESK 765

Query: 567  AVKGSCDLTPASSMRALRREREMLCKQMNKKLSLEERERIYLRWSIGLKSKQRRVQLARL 388
            AV GS + +  SS + L+REREMLC+QM K+LS+EERE +Y +W + L SK+RR+Q+AR 
Sbjct: 766  AVIGSLNTSLVSSAKKLQREREMLCRQMQKRLSIEERESMYTKWGVSLASKRRRLQVARR 825

Query: 387  LWTDTKDMDHVIESANIVAKLVGLPEPSLALKEMFTLSFAPQKKSRRSY-SWR 232
            LWT+TKD++H+ ESA++VA+L+GL EP  AL+EMF LSFAPQ+ +RRS+ SWR
Sbjct: 826  LWTETKDLEHIRESASLVARLIGLLEPGKALREMFGLSFAPQQFTRRSHNSWR 878


>ref|XP_003580238.1| PREDICTED: uncharacterized protein LOC100821877 isoform 1
            [Brachypodium distachyon]
          Length = 940

 Score =  259 bits (662), Expect = 6e-67
 Identities = 130/233 (55%), Positives = 174/233 (74%), Gaps = 1/233 (0%)
 Frame = -3

Query: 927  IQSFVAGLKKRTKIQYENKLVDNQAQAGLKTDGSEKTVKGVGSDPVRVPHEMPSSWPLEF 748
            I  FVA LK+    QY+ +L   +    L    +E T++ VG DP+    + PS WPLEF
Sbjct: 707  IGEFVAELKEMA--QYQKQLGGQRGNGEL----AEGTIRSVGLDPIMDALQSPSRWPLEF 760

Query: 747  ERQQMELIELWHICHVSLVHRTYFFLLFKGDPSDSVYMQVERRRLSFLKDLYSQRNFDKI 568
            E++Q E+I+LWH C+ SLVHRTYFFLLFKGDP+DS+YM+VE RRLSFLKD YS+   +  
Sbjct: 761  EKKQQEIIDLWHACYASLVHRTYFFLLFKGDPADSIYMEVEIRRLSFLKDTYSKGGMESK 820

Query: 567  AVKGSCDLTPASSMRALRREREMLCKQMNKKLSLEERERIYLRWSIGLKSKQRRVQLARL 388
            AV GS + +  SS + L+REREMLC+QM K+LS+EERE +Y +W + L SK+RR+Q+AR 
Sbjct: 821  AVIGSLNTSLVSSAKKLQREREMLCRQMQKRLSIEERESMYTKWGVSLASKRRRLQVARR 880

Query: 387  LWTDTKDMDHVIESANIVAKLVGLPEPSLALKEMFTLSFAPQKKSRRSY-SWR 232
            LWT+TKD++H+ ESA++VA+L+GL EP  AL+EMF LSFAPQ+ +RRS+ SWR
Sbjct: 881  LWTETKDLEHIRESASLVARLIGLLEPGKALREMFGLSFAPQQFTRRSHNSWR 933


>dbj|BAJ95863.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 936

 Score =  258 bits (659), Expect = 1e-66
 Identities = 131/233 (56%), Positives = 171/233 (73%), Gaps = 1/233 (0%)
 Frame = -3

Query: 927  IQSFVAGLKKRTKIQYENKLVDNQAQAGLKTDGSEKTVKGVGSDPVRVPHEMPSSWPLEF 748
            I  FVA LK+    QY+ +L        +    +E TV+ VG DP+    + PS WPLEF
Sbjct: 703  IGEFVAELKEMA--QYQKQLGGQYVNGEI----AEGTVRSVGLDPIMDALQSPSRWPLEF 756

Query: 747  ERQQMELIELWHICHVSLVHRTYFFLLFKGDPSDSVYMQVERRRLSFLKDLYSQRNFDKI 568
            ER+Q E+I+LWH C+ SLVHRTYFFLLFKGDP+DS+YM+VE RRLSFLKD Y+    +  
Sbjct: 757  ERKQQEIIDLWHACYASLVHRTYFFLLFKGDPADSIYMEVEIRRLSFLKDTYANGGMESK 816

Query: 567  AVKGSCDLTPASSMRALRREREMLCKQMNKKLSLEERERIYLRWSIGLKSKQRRVQLARL 388
             V GS + +  SS R L+REREMLC+QM K+LS+EERE +Y +W + L SK+RR+Q+AR 
Sbjct: 817  VVAGSLNTSLVSSARKLQREREMLCRQMQKRLSIEERESMYTKWGVSLSSKRRRLQVARR 876

Query: 387  LWTDTKDMDHVIESANIVAKLVGLPEPSLALKEMFTLSFAPQKKSRRSY-SWR 232
            LWT+TK+++HV ESA++VA+L+GL EP  AL+EMF LSFAPQ+ SRRS+ SWR
Sbjct: 877  LWTETKNLEHVRESASLVARLIGLLEPGKALREMFGLSFAPQQFSRRSHNSWR 929


>dbj|BAJ94998.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 873

 Score =  258 bits (659), Expect = 1e-66
 Identities = 131/233 (56%), Positives = 171/233 (73%), Gaps = 1/233 (0%)
 Frame = -3

Query: 927  IQSFVAGLKKRTKIQYENKLVDNQAQAGLKTDGSEKTVKGVGSDPVRVPHEMPSSWPLEF 748
            I  FVA LK+    QY+ +L        +    +E TV+ VG DP+    + PS WPLEF
Sbjct: 640  IGEFVAELKEMA--QYQKQLGGQYVNGEI----AEGTVRSVGLDPIMDALQSPSRWPLEF 693

Query: 747  ERQQMELIELWHICHVSLVHRTYFFLLFKGDPSDSVYMQVERRRLSFLKDLYSQRNFDKI 568
            ER+Q E+I+LWH C+ SLVHRTYFFLLFKGDP+DS+YM+VE RRLSFLKD Y+    +  
Sbjct: 694  ERKQQEIIDLWHACYASLVHRTYFFLLFKGDPADSIYMEVEIRRLSFLKDTYANGGMESK 753

Query: 567  AVKGSCDLTPASSMRALRREREMLCKQMNKKLSLEERERIYLRWSIGLKSKQRRVQLARL 388
             V GS + +  SS R L+REREMLC+QM K+LS+EERE +Y +W + L SK+RR+Q+AR 
Sbjct: 754  VVAGSLNTSLVSSARKLQREREMLCRQMQKRLSIEERESMYTKWGVSLSSKRRRLQVARR 813

Query: 387  LWTDTKDMDHVIESANIVAKLVGLPEPSLALKEMFTLSFAPQKKSRRSY-SWR 232
            LWT+TK+++HV ESA++VA+L+GL EP  AL+EMF LSFAPQ+ SRRS+ SWR
Sbjct: 814  LWTETKNLEHVRESASLVARLIGLLEPGKALREMFGLSFAPQQFSRRSHNSWR 866


Top