BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011814
         (1539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protei...   335   2e-89
ref|XP_002313690.1| f-box family protein [Populus trichocarpa] g...   324   4e-86
ref|XP_002305539.1| f-box family protein [Populus trichocarpa] g...   320   6e-85
ref|XP_004154592.1| PREDICTED: F-box protein SKIP23-like [Cucumi...   313   1e-82
ref|XP_004140043.1| PREDICTED: F-box protein SKIP23-like [Cucumi...   313   1e-82

>ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protein SKIP23-like [Vitis
            vinifera]
          Length = 387

 Score =  335 bits (858), Expect = 2e-89
 Identities = 189/395 (47%), Positives = 246/395 (62%), Gaps = 9/395 (2%)
 Frame = -3

Query: 1525 EWSQLPQDLLDQITKKIPSTIDLLRFRSVCSTWRSSITYPLNTFPNKIPIRPSNPTTENF 1346
            EW+ LP+DLL  I K++ S  DLLRFRSVCS+WRSS      +  + +PI P+   +E  
Sbjct: 3    EWANLPRDLLHLIAKRLDSHFDLLRFRSVCSSWRSSTPSKPRSIFSHLPILPTTGFSEI- 61

Query: 1345 DSGLFHLSKRLILHVSSPSNQQN---EGWIIKLEQDDSNFSHLLNPLSESKIQPLPETFP 1175
             +  F+LSKR IL +  P ++       W+IK+E+D S    L+NPL+  K + LP  FP
Sbjct: 62   -TWAFYLSKRSILQLGLPDSRAQTTPNSWLIKIEEDPSGVIRLINPLTTFKFRHLPPDFP 120

Query: 1174 KHFDILNLRVFELCQEYVLRYADKWPL--SFAGDVYREKVIFSPTPPWSNEMDYVIMTIH 1001
            K FD   LRVFEL QEYVL Y D  P   ++ G +Y EKV F       N  D+ ++TIH
Sbjct: 121  KTFDFSGLRVFELGQEYVLEYMDYRPPGNAYLGSLYMEKVAFCS----GNGDDFWLLTIH 176

Query: 1000 VSGKLALFRLKDNVWSIIDEMPNPYEDVIHFKGRFYAVDGTGRAVVV----APDLTISEV 833
            +SGKLA+FR  D  W IID+M +PY+DVI F G+FYAVD TGR VVV         ++  
Sbjct: 177  LSGKLAMFRSGDKKWMIIDDMQSPYDDVIFFDGKFYAVDNTGRTVVVDVADGSSPVVNLA 236

Query: 832  AGPVFGGDKKYLVEMDGELLLVDRYLKNGNDDLNFWNDNEIYVPNDDTYVMDTTLLFIVY 653
            A  VFGGDKK LVE +GELLLVD Y    +DD     D  +       ++++  + F V+
Sbjct: 237  ASSVFGGDKKVLVESEGELLLVDTYFTMYHDD-----DEHV------RWMIERMIHFKVF 285

Query: 652  RLDKWEKTWVEVKSLGDRLLFLSDNCSFCAPASDLYGSKGNCIYFTDRYFQSFKVEESAF 473
            RLD+ E+ WVE++SLGDRLLFL D+ SF A ASD YG KGN I FT+  F S   E+ A 
Sbjct: 286  RLDQREQKWVEIESLGDRLLFLGDDSSFSARASDFYGCKGNSICFTNISFFSDAEEDDAS 345

Query: 472  NRHSIGVFSLENGSIAPLTSYAGYSQLFWPPPMWI 368
               +IGVF L++GSI PL+SYA YS+  WPPP W+
Sbjct: 346  RSGTIGVFDLDSGSIGPLSSYANYSKTIWPPPAWV 380


>ref|XP_002313690.1| f-box family protein [Populus trichocarpa]
            gi|222850098|gb|EEE87645.1| f-box family protein [Populus
            trichocarpa]
          Length = 410

 Score =  324 bits (830), Expect = 4e-86
 Identities = 182/402 (45%), Positives = 255/402 (63%), Gaps = 16/402 (3%)
 Frame = -3

Query: 1525 EWSQLPQDLLDQITKKIPSTIDLLRFRSVCSTWRSSITYPLNTFPNKIPIRPSNPTTENF 1346
            EW+ LP+DL++ I+K + ++ DLLRFRSVC++WRSSI       P K P   SN      
Sbjct: 3    EWTHLPKDLIELISKCLDTSTDLLRFRSVCNSWRSSI-------PPKSPRLSSNTFKILP 55

Query: 1345 DSGLFHLS------KRLILHVSSPSNQQN---EGWIIKLEQDDSNFSHLLNPLSESKIQP 1193
            + G+ H S      KR I  +  P++      +GW++K+E+D     HL +PLS  +   
Sbjct: 56   NDGISHTSFGFSLFKRSIFLIGLPNSHNQTDLQGWLVKIEEDVPGKKHLFDPLSRCRSTS 115

Query: 1192 LPETFPKHFDILNLRVFELCQEYVLRYADKWPLSF----AGDVYREKVIFSPTPPWSN-E 1028
            L  + P+  D++NLR+ EL  EYVL +    P S     AG++Y EKV+      W N E
Sbjct: 116  LHHSLPRVLDLMNLRIRELGHEYVLHHVSYKPNSSSFTDAGNLYMEKVVMI----WLNCE 171

Query: 1027 MDYVIMTIHVSGKLALFRLKDNVWSIIDEMPNPYEDVIHFKGRFYAVDGTGRAVVVAPDL 848
             ++V++TIHVSGKLA+F+  D  W+II+EMP+P++DVI +KGRFYAVD TGR VVVA D 
Sbjct: 172  TEFVLLTIHVSGKLAMFKSGDKRWTIINEMPSPFDDVIVYKGRFYAVDNTGRTVVVALDT 231

Query: 847  TISEVAGPVFGGDKKYLVEMDGELLLVDRYLKNGNDD-LNFWNDNEIYVPNDDTYVMDTT 671
             +  V  PVFGGDKKYLVE  G+LLLVD YL    D+ L+  ND    V +   Y+ + T
Sbjct: 232  DLGLVGDPVFGGDKKYLVESKGDLLLVDMYLSIDTDEGLSIGND---VVQDLVQYMSERT 288

Query: 670  LLFIVYRLDKWEKTWVEVKSLGDRLLFLSDNCSFCAPASDLYGSKGNCIYFTDRYFQSFK 491
            + F V++L++  K+W+EVK+L DR+LFL D+ +F A AS+L G KGNCI+F D +F S +
Sbjct: 289  VRFKVFKLNEEGKSWIEVKNLEDRVLFLGDDSTFSASASELSGCKGNCIFFEDNFFYSRE 348

Query: 490  V-EESAFNRHSIGVFSLENGSIAPLTSYAGYSQLFWPPPMWI 368
              ++ +     IGVF LE+G I PL ++  YS++FWPPP WI
Sbjct: 349  EGDDGSMIGRDIGVFELESGCIGPLRNFPDYSKMFWPPPDWI 390


>ref|XP_002305539.1| f-box family protein [Populus trichocarpa]
            gi|222848503|gb|EEE86050.1| f-box family protein [Populus
            trichocarpa]
          Length = 469

 Score =  320 bits (820), Expect = 6e-85
 Identities = 178/397 (44%), Positives = 254/397 (63%), Gaps = 11/397 (2%)
 Frame = -3

Query: 1525 EWSQLPQDLLDQITKKIPSTIDLLRFRSVCSTWRSSIT-YPLNTFPNKIPIRPSNPTTEN 1349
            EW+ LP+DL++ I+K++ ++ DLLRFRSVC++WRSSI   P     N   I P++  +  
Sbjct: 3    EWTHLPKDLMELISKRLDTSTDLLRFRSVCNSWRSSIPPEPPCLSSNTFKILPNDGISHT 62

Query: 1348 FDSGLFHLSKRLILHVSSPSNQQN---EGWIIKLEQDDSNFSHLLNPLSESKIQPLPETF 1178
              S  F L KR +  V  P++      +GW+IK+E+D     HL +PLS  +   LP   
Sbjct: 63   --SFGFSLFKRTVFLVGLPNSHNQTDTQGWLIKIEEDVPGKKHLFDPLSRCRSTSLPNNL 120

Query: 1177 PKHFDILNLRVFELCQEYVLRYADKWPLSF----AGDVYREKVIFSPTPPWSNEM-DYVI 1013
            P+  D++NLR+ EL  EYVL + +  P S     AG++Y EKV+      W N + ++V+
Sbjct: 121  PRVLDLMNLRIRELGHEYVLHHLNYKPNSSSFTDAGNLYMEKVVMI----WLNSLTEFVL 176

Query: 1012 MTIHVSGKLALFRLKDNVWSIIDEMPNPYEDVIHFKGRFYAVDGTGRAVVVAPDLTISEV 833
            +TIHVSGKLA+F+  D  W+II+EMP+P++DVI +KGRFYAVD TGR VVVA D  +  V
Sbjct: 177  LTIHVSGKLAIFKSGDKRWTIINEMPSPFDDVIVYKGRFYAVDNTGRTVVVAMDTNLGLV 236

Query: 832  AGPVFGGDKKYLVEMDGELLLVDRYLKNGNDD-LNFWNDNEIYVPNDDTYVMDTTLLFIV 656
              PVFGGDKKYLVE  G+LLLVD YL   +D+ L+  +D    V +   Y+ + T+ F V
Sbjct: 237  GNPVFGGDKKYLVESKGDLLLVDMYLSIDSDEGLSIGHD---VVQDLVQYMSERTVWFKV 293

Query: 655  YRLDKWEKTWVEVKSLGDRLLFLSDNCSFCAPASDLYGSKGNCIYFTDRYFQS-FKVEES 479
            ++L++  K W+EV  L DR+LFL D+ +F A AS+L G KGNCI+F D +F S  + ++ 
Sbjct: 294  FKLNEEGKCWIEVNDLEDRVLFLGDDLTFSASASELSGCKGNCIFFNDDFFYSRGEGDDG 353

Query: 478  AFNRHSIGVFSLENGSIAPLTSYAGYSQLFWPPPMWI 368
            +     IGVF LE+G I PL ++   S++FWPPP W+
Sbjct: 354  SLFGRDIGVFELESGCIGPLRNFPDNSKMFWPPPDWV 390


>ref|XP_004154592.1| PREDICTED: F-box protein SKIP23-like [Cucumis sativus]
          Length = 458

 Score =  313 bits (801), Expect = 1e-82
 Identities = 171/391 (43%), Positives = 245/391 (62%), Gaps = 5/391 (1%)
 Frame = -3

Query: 1525 EWSQLPQDLLDQITKKIPSTIDLLRFRSVCSTWRSSITYPLNTFPNKIPIRPSNPTTENF 1346
            EWS LP+DLL  I++++ +  D +RFRSVCS+WRS ++   +T P + P  P++  ++  
Sbjct: 3    EWSHLPKDLLYLISQRLQNPFDTMRFRSVCSSWRSVVSPKRHTLPVRFPFLPNHGISD-- 60

Query: 1345 DSGLFHLSKRLILHVSSPSNQQNEGWIIKLEQDDSNFSHLLNPLSESKIQPLPETFPKHF 1166
             +  F+L+KR I  V SP +  ++GW+IK+E+D      + NPLS+S  +PLP+ FPK  
Sbjct: 61   PTWGFNLTKRSIFRVGSPMDH-SDGWLIKVEEDACGMIKISNPLSKSYFKPLPKNFPKVL 119

Query: 1165 DILNLRVFELCQEYVLRYADKWPLSF----AGDVYREKVIFSPTPPWSNEMDYVIMTIHV 998
            ++LN  V ELCQEYVL Y + WP+      AGD+YREK+ +       ++  +V++TIHV
Sbjct: 120  NLLNFPVLELCQEYVLHYLNFWPVRHRPGDAGDLYREKIAYKCLNYDGSQ--FVLVTIHV 177

Query: 997  SGKLALFRLKDNVWSIIDEMPNPYEDVIHFKGRFYAVDGTGRAVVVAPDLTISEVAGPVF 818
            SGKLA+F+ +D  WS I     PY+DVI F G FYAVD +G   +V     ++ +A PVF
Sbjct: 178  SGKLAMFKSEDGQWSTIHHTALPYDDVILFNGEFYAVDNSGATFLVESQHKVTLIAEPVF 237

Query: 817  GGDKKYLVEMDGELLLVDRYLKNGNDDLNFWNDNEIYVPNDDTYVMDTTLLFIVYRLDK- 641
            GGDKK L+E +GELLLVD YL   +++  F  D E   P +   + + T+ F V++L + 
Sbjct: 238  GGDKKILMECNGELLLVDMYLTVDSEE-GFGLDGE---PTEGV-LHEKTVGFKVFKLHRN 292

Query: 640  WEKTWVEVKSLGDRLLFLSDNCSFCAPASDLYGSKGNCIYFTDRYFQSFKVEESAFNRHS 461
              K W  V  LG+ +LFL +NCSF A AS + G KGNCI+FTD +      E+  F    
Sbjct: 293  GSKKWTVVCDLGNTMLFLGENCSFSASASGVSGCKGNCIFFTDGFLCPNVDEDDVFKGSD 352

Query: 460  IGVFSLENGSIAPLTSYAGYSQLFWPPPMWI 368
            I +F LE G+I+PL+    YS+LFWPPP WI
Sbjct: 353  IAIFDLEFGTISPLSDSPMYSRLFWPPPSWI 383


>ref|XP_004140043.1| PREDICTED: F-box protein SKIP23-like [Cucumis sativus]
          Length = 404

 Score =  313 bits (801), Expect = 1e-82
 Identities = 171/391 (43%), Positives = 245/391 (62%), Gaps = 5/391 (1%)
 Frame = -3

Query: 1525 EWSQLPQDLLDQITKKIPSTIDLLRFRSVCSTWRSSITYPLNTFPNKIPIRPSNPTTENF 1346
            EWS LP+DLL  I++++ +  D +RFRSVCS+WRS ++   +T P + P  P++  ++  
Sbjct: 3    EWSHLPKDLLYLISQRLQNPFDTMRFRSVCSSWRSVVSPKRHTLPVRFPFLPNHGISD-- 60

Query: 1345 DSGLFHLSKRLILHVSSPSNQQNEGWIIKLEQDDSNFSHLLNPLSESKIQPLPETFPKHF 1166
             +  F+L+KR I  V SP +  ++GW+IK+E+D      + NPLS+S  +PLP+ FPK  
Sbjct: 61   PTWGFNLTKRSIFRVGSPMDH-SDGWLIKVEEDACGMIKISNPLSKSYFKPLPKNFPKVL 119

Query: 1165 DILNLRVFELCQEYVLRYADKWPLSF----AGDVYREKVIFSPTPPWSNEMDYVIMTIHV 998
            ++LN  V ELCQEYVL Y + WP+      AGD+YREK+ +       ++  +V++TIHV
Sbjct: 120  NLLNFPVLELCQEYVLHYLNFWPVRHRPGDAGDLYREKIAYKCLNYDGSQ--FVLVTIHV 177

Query: 997  SGKLALFRLKDNVWSIIDEMPNPYEDVIHFKGRFYAVDGTGRAVVVAPDLTISEVAGPVF 818
            SGKLA+F+ +D  WS I     PY+DVI F G FYAVD +G   +V     ++ +A PVF
Sbjct: 178  SGKLAMFKSEDGQWSTIHHTALPYDDVILFNGEFYAVDNSGATFLVESQHKVTLIAEPVF 237

Query: 817  GGDKKYLVEMDGELLLVDRYLKNGNDDLNFWNDNEIYVPNDDTYVMDTTLLFIVYRLDK- 641
            GGDKK L+E +GELLLVD YL   +++  F  D E   P +   + + T+ F V++L + 
Sbjct: 238  GGDKKILMECNGELLLVDMYLTVDSEE-GFGLDGE---PTEGV-LHEKTVGFKVFKLHRN 292

Query: 640  WEKTWVEVKSLGDRLLFLSDNCSFCAPASDLYGSKGNCIYFTDRYFQSFKVEESAFNRHS 461
              K W  V  LG+ +LFL +NCSF A AS + G KGNCI+FTD +      E+  F    
Sbjct: 293  GSKKWTVVCDLGNTMLFLGENCSFSASASGVSGCKGNCIFFTDGFLCPNVDEDDVFKGSD 352

Query: 460  IGVFSLENGSIAPLTSYAGYSQLFWPPPMWI 368
            I +F LE G+I+PL+    YS+LFWPPP WI
Sbjct: 353  IAIFDLEFGTISPLSDSPMYSRLFWPPPSWI 383