BLASTX nr result

ID: Coptis21_contig00011801 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011801
         (1102 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285431.1| PREDICTED: uncharacterized protein LOC100252...    90   9e-16
ref|XP_003555752.1| PREDICTED: uncharacterized protein LOC100783...    74   5e-11
ref|XP_003535997.1| PREDICTED: uncharacterized protein LOC100806...    74   8e-11
gb|AFK34388.1| unknown [Lotus japonicus]                               69   3e-09
ref|XP_002528375.1| conserved hypothetical protein [Ricinus comm...    69   3e-09

>ref|XP_002285431.1| PREDICTED: uncharacterized protein LOC100252766 [Vitis vinifera]
           gi|296083714|emb|CBI23703.3| unnamed protein product
           [Vitis vinifera]
          Length = 92

 Score = 90.1 bits (222), Expect = 9e-16
 Identities = 46/93 (49%), Positives = 58/93 (62%)
 Frame = -3

Query: 728 NPDNCNNKPLISLDSEVVVERVGADKXXXXXXESNALLSTRRGGISKRPKKLRRKVQWND 549
           +P NC NKPL++LDS  +  R   +        SN+LL  RRGG+S+R  K+RRKVQWND
Sbjct: 5   DPINCTNKPLVALDSPKIENRDDGEDSE-----SNSLLPPRRGGMSRRQDKVRRKVQWND 59

Query: 548 RTGNKLVEILEFEPXXXXXXXXXXXXSCICNIM 450
           R GNKLVE+LEF+P            SCIC +M
Sbjct: 60  RNGNKLVEVLEFQPSDVSDTDDEESDSCICTLM 92


>ref|XP_003555752.1| PREDICTED: uncharacterized protein LOC100783330 [Glycine max]
          Length = 98

 Score = 74.3 bits (181), Expect = 5e-11
 Identities = 40/87 (45%), Positives = 53/87 (60%)
 Frame = -3

Query: 710 NKPLISLDSEVVVERVGADKXXXXXXESNALLSTRRGGISKRPKKLRRKVQWNDRTGNKL 531
           +KP+++  S +V E+V          +SN+LL  RRGG+S+  +K RRKVQWNDR GNKL
Sbjct: 14  HKPVVA--SSLVCEKVEDHVNGEDDSDSNSLLPPRRGGMSRNCEKTRRKVQWNDRNGNKL 71

Query: 530 VEILEFEPXXXXXXXXXXXXSCICNIM 450
            E+LE+EP            SCIC IM
Sbjct: 72  AEVLEYEPSDVSDSEDEDSDSCICTIM 98


>ref|XP_003535997.1| PREDICTED: uncharacterized protein LOC100806080 isoform 1 [Glycine
           max]
          Length = 98

 Score = 73.6 bits (179), Expect = 8e-11
 Identities = 40/87 (45%), Positives = 53/87 (60%)
 Frame = -3

Query: 710 NKPLISLDSEVVVERVGADKXXXXXXESNALLSTRRGGISKRPKKLRRKVQWNDRTGNKL 531
           +KP+++  S +V E+V          +SN+LL  RRGG+S+  +K RRKVQWNDR GNKL
Sbjct: 14  HKPVVT--SSLVCEKVEDHVNGEDDSDSNSLLPPRRGGMSRNCEKTRRKVQWNDRNGNKL 71

Query: 530 VEILEFEPXXXXXXXXXXXXSCICNIM 450
            E+LE+EP            SCIC IM
Sbjct: 72  AEVLEYEPSDVSDSEDEDSDSCICAIM 98


>gb|AFK34388.1| unknown [Lotus japonicus]
          Length = 107

 Score = 68.6 bits (166), Expect = 3e-09
 Identities = 44/103 (42%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
 Frame = -3

Query: 749 MDNGEKFNPDNCNNKPLI--SLDSEVVVERVGADKXXXXXXESNALLSTRRGGISKRPKK 576
           MD   K   +  +NKP++  SL  E V +            +SN+LL  RRGG+S+   K
Sbjct: 5   MDTDSKDANNYMDNKPVMGSSLGGEKVDDHDHDHVNGEDDSDSNSLLPPRRGGMSRNSDK 64

Query: 575 LRRKVQWNDRTGNKLVEILEFEP-XXXXXXXXXXXXSCICNIM 450
            R KVQWNDR GNKLVE+LE+EP             SCIC IM
Sbjct: 65  TRLKVQWNDRNGNKLVEVLEYEPSDVSDSDDDEDSDSCICTIM 107


>ref|XP_002528375.1| conserved hypothetical protein [Ricinus communis]
           gi|223532243|gb|EEF34047.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 83

 Score = 68.6 bits (166), Expect = 3e-09
 Identities = 36/68 (52%), Positives = 46/68 (67%)
 Frame = -3

Query: 710 NKPLISLDSEVVVERVGADKXXXXXXESNALLSTRRGGISKRPKKLRRKVQWNDRTGNKL 531
           NKPL+++DSE V E    D+       SN LL  R GG+S+ P+++RRKVQWND  GNKL
Sbjct: 13  NKPLMTVDSEKV-ENHSDDREDYSE--SNTLLPPRTGGMSRNPERVRRKVQWNDNNGNKL 69

Query: 530 VEILEFEP 507
            E+L FEP
Sbjct: 70  AEVLVFEP 77


Top