BLASTX nr result

ID: Coptis21_contig00011737 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011737
         (612 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK35500.1| unknown [Lotus japonicus]                              198   7e-49
ref|XP_004152166.1| PREDICTED: 50S ribosomal protein L18-like is...   196   2e-48
ref|XP_002523696.1| conserved hypothetical protein [Ricinus comm...   195   6e-48
ref|XP_004165546.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosoma...   194   1e-47
ref|NP_001238725.1| uncharacterized protein LOC100500222 [Glycin...   194   1e-47

>gb|AFK35500.1| unknown [Lotus japonicus]
          Length = 128

 Score =  198 bits (503), Expect = 7e-49
 Identities = 94/120 (78%), Positives = 109/120 (90%)
 Frame = +2

Query: 47  MTVMKRYVLRLFISLKYITANVVDRNNGRIVATASTIEHSLKEALECGRSCNXXXXXXVG 226
           MT+MKRYVLRLF SLKYITANVVDRNNGRIVAT+ST+EH++KE+LECGRSCN      VG
Sbjct: 1   MTLMKRYVLRLFTSLKYITANVVDRNNGRIVATSSTVEHAMKESLECGRSCNAKAAAIVG 60

Query: 227 EVLAMRLKVEGLDQGEGRGIHANVEKEIQKKGFKSQTKVWAIVNALKNNGVKVVLDGNDD 406
           EVLA RLKVEGL++GEGRGIH NV+KE++KKGFK+QTK+WA+VNALKNNGVK+VLD  DD
Sbjct: 61  EVLARRLKVEGLNEGEGRGIHVNVKKEVEKKGFKNQTKIWAVVNALKNNGVKLVLDDEDD 120


>ref|XP_004152166.1| PREDICTED: 50S ribosomal protein L18-like isoform 1 [Cucumis
           sativus] gi|449468916|ref|XP_004152167.1| PREDICTED: 50S
           ribosomal protein L18-like isoform 2 [Cucumis sativus]
          Length = 129

 Score =  196 bits (499), Expect = 2e-48
 Identities = 93/122 (76%), Positives = 112/122 (91%), Gaps = 1/122 (0%)
 Frame = +2

Query: 47  MTVMKRYVLRLFISLKYITANVVDRNNGRIVATASTIEHSLKEALECGRSCNXXXXXXVG 226
           MT++KRYVLRLF+SLKYITANVVDRNNGR+VATAST+EHS+K +LECGRSCN      VG
Sbjct: 1   MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVG 60

Query: 227 EVLAMRLKVEGLDQGEGRGIHANVEKEIQKKGFKSQTKVWAIVNALKNNGVKVVLDGN-D 403
           EVLAMRLKV+GL+QG+GRGIHA+++KEI+KKGFK+ TK+WAIVN+LKNNGVK++LD N D
Sbjct: 61  EVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIWAIVNSLKNNGVKLILDNNVD 120

Query: 404 DN 409
           DN
Sbjct: 121 DN 122


>ref|XP_002523696.1| conserved hypothetical protein [Ricinus communis]
           gi|223537000|gb|EEF38636.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 129

 Score =  195 bits (495), Expect = 6e-48
 Identities = 91/121 (75%), Positives = 108/121 (89%)
 Frame = +2

Query: 47  MTVMKRYVLRLFISLKYITANVVDRNNGRIVATASTIEHSLKEALECGRSCNXXXXXXVG 226
           MTV+KRYVLR+FISLKYITANVVDRNNGRIVATAST+EHS+K  LECGRSCN      VG
Sbjct: 1   MTVLKRYVLRMFISLKYITANVVDRNNGRIVATASTVEHSIKNTLECGRSCNAKAAAIVG 60

Query: 227 EVLAMRLKVEGLDQGEGRGIHANVEKEIQKKGFKSQTKVWAIVNALKNNGVKVVLDGNDD 406
           EVLAMRLKVEGL+QG+GRGIH +  KE++KKGFK++TK+WAI+NAL+NNGVKV+ + ND+
Sbjct: 61  EVLAMRLKVEGLEQGQGRGIHVDANKEVEKKGFKNRTKIWAIINALRNNGVKVISNDNDE 120

Query: 407 N 409
           N
Sbjct: 121 N 121


>ref|XP_004165546.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosomal protein L18-like
           [Cucumis sativus]
          Length = 129

 Score =  194 bits (493), Expect = 1e-47
 Identities = 91/121 (75%), Positives = 110/121 (90%)
 Frame = +2

Query: 47  MTVMKRYVLRLFISLKYITANVVDRNNGRIVATASTIEHSLKEALECGRSCNXXXXXXVG 226
           MT++KRYVLRLF+SLKYITANVVDRNNGR+VATAST+EHS+K +LECGRSCN      VG
Sbjct: 1   MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVG 60

Query: 227 EVLAMRLKVEGLDQGEGRGIHANVEKEIQKKGFKSQTKVWAIVNALKNNGVKVVLDGNDD 406
           EVLAMRLKV+GL+QG+GRGIHA+ +KEI+KKGFK+ TK+WAIVN+LKNNGVK++LD N D
Sbjct: 61  EVLAMRLKVDGLEQGQGRGIHADXKKEIEKKGFKNHTKIWAIVNSLKNNGVKLILDNNVD 120

Query: 407 N 409
           +
Sbjct: 121 D 121


>ref|NP_001238725.1| uncharacterized protein LOC100500222 [Glycine max]
           gi|255629748|gb|ACU15223.1| unknown [Glycine max]
          Length = 128

 Score =  194 bits (492), Expect = 1e-47
 Identities = 93/121 (76%), Positives = 108/121 (89%)
 Frame = +2

Query: 47  MTVMKRYVLRLFISLKYITANVVDRNNGRIVATASTIEHSLKEALECGRSCNXXXXXXVG 226
           M VMKRYVLRLFISLKYITANVVDRNNGRIV ++ST EH++KE+LECGRSCN      VG
Sbjct: 1   MPVMKRYVLRLFISLKYITANVVDRNNGRIVVSSSTAEHTIKESLECGRSCNAKAAAVVG 60

Query: 227 EVLAMRLKVEGLDQGEGRGIHANVEKEIQKKGFKSQTKVWAIVNALKNNGVKVVLDGNDD 406
           EVLA RLKVEGL++GEGRGIHAN+ KE+ KKGFK+QTKVWA+VNALKNNGVK++LD +DD
Sbjct: 61  EVLARRLKVEGLNEGEGRGIHANITKEVGKKGFKNQTKVWAVVNALKNNGVKLILDDDDD 120

Query: 407 N 409
           +
Sbjct: 121 D 121


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