BLASTX nr result
ID: Coptis21_contig00011737
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00011737 (612 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFK35500.1| unknown [Lotus japonicus] 198 7e-49 ref|XP_004152166.1| PREDICTED: 50S ribosomal protein L18-like is... 196 2e-48 ref|XP_002523696.1| conserved hypothetical protein [Ricinus comm... 195 6e-48 ref|XP_004165546.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosoma... 194 1e-47 ref|NP_001238725.1| uncharacterized protein LOC100500222 [Glycin... 194 1e-47 >gb|AFK35500.1| unknown [Lotus japonicus] Length = 128 Score = 198 bits (503), Expect = 7e-49 Identities = 94/120 (78%), Positives = 109/120 (90%) Frame = +2 Query: 47 MTVMKRYVLRLFISLKYITANVVDRNNGRIVATASTIEHSLKEALECGRSCNXXXXXXVG 226 MT+MKRYVLRLF SLKYITANVVDRNNGRIVAT+ST+EH++KE+LECGRSCN VG Sbjct: 1 MTLMKRYVLRLFTSLKYITANVVDRNNGRIVATSSTVEHAMKESLECGRSCNAKAAAIVG 60 Query: 227 EVLAMRLKVEGLDQGEGRGIHANVEKEIQKKGFKSQTKVWAIVNALKNNGVKVVLDGNDD 406 EVLA RLKVEGL++GEGRGIH NV+KE++KKGFK+QTK+WA+VNALKNNGVK+VLD DD Sbjct: 61 EVLARRLKVEGLNEGEGRGIHVNVKKEVEKKGFKNQTKIWAVVNALKNNGVKLVLDDEDD 120 >ref|XP_004152166.1| PREDICTED: 50S ribosomal protein L18-like isoform 1 [Cucumis sativus] gi|449468916|ref|XP_004152167.1| PREDICTED: 50S ribosomal protein L18-like isoform 2 [Cucumis sativus] Length = 129 Score = 196 bits (499), Expect = 2e-48 Identities = 93/122 (76%), Positives = 112/122 (91%), Gaps = 1/122 (0%) Frame = +2 Query: 47 MTVMKRYVLRLFISLKYITANVVDRNNGRIVATASTIEHSLKEALECGRSCNXXXXXXVG 226 MT++KRYVLRLF+SLKYITANVVDRNNGR+VATAST+EHS+K +LECGRSCN VG Sbjct: 1 MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVG 60 Query: 227 EVLAMRLKVEGLDQGEGRGIHANVEKEIQKKGFKSQTKVWAIVNALKNNGVKVVLDGN-D 403 EVLAMRLKV+GL+QG+GRGIHA+++KEI+KKGFK+ TK+WAIVN+LKNNGVK++LD N D Sbjct: 61 EVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIWAIVNSLKNNGVKLILDNNVD 120 Query: 404 DN 409 DN Sbjct: 121 DN 122 >ref|XP_002523696.1| conserved hypothetical protein [Ricinus communis] gi|223537000|gb|EEF38636.1| conserved hypothetical protein [Ricinus communis] Length = 129 Score = 195 bits (495), Expect = 6e-48 Identities = 91/121 (75%), Positives = 108/121 (89%) Frame = +2 Query: 47 MTVMKRYVLRLFISLKYITANVVDRNNGRIVATASTIEHSLKEALECGRSCNXXXXXXVG 226 MTV+KRYVLR+FISLKYITANVVDRNNGRIVATAST+EHS+K LECGRSCN VG Sbjct: 1 MTVLKRYVLRMFISLKYITANVVDRNNGRIVATASTVEHSIKNTLECGRSCNAKAAAIVG 60 Query: 227 EVLAMRLKVEGLDQGEGRGIHANVEKEIQKKGFKSQTKVWAIVNALKNNGVKVVLDGNDD 406 EVLAMRLKVEGL+QG+GRGIH + KE++KKGFK++TK+WAI+NAL+NNGVKV+ + ND+ Sbjct: 61 EVLAMRLKVEGLEQGQGRGIHVDANKEVEKKGFKNRTKIWAIINALRNNGVKVISNDNDE 120 Query: 407 N 409 N Sbjct: 121 N 121 >ref|XP_004165546.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosomal protein L18-like [Cucumis sativus] Length = 129 Score = 194 bits (493), Expect = 1e-47 Identities = 91/121 (75%), Positives = 110/121 (90%) Frame = +2 Query: 47 MTVMKRYVLRLFISLKYITANVVDRNNGRIVATASTIEHSLKEALECGRSCNXXXXXXVG 226 MT++KRYVLRLF+SLKYITANVVDRNNGR+VATAST+EHS+K +LECGRSCN VG Sbjct: 1 MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVG 60 Query: 227 EVLAMRLKVEGLDQGEGRGIHANVEKEIQKKGFKSQTKVWAIVNALKNNGVKVVLDGNDD 406 EVLAMRLKV+GL+QG+GRGIHA+ +KEI+KKGFK+ TK+WAIVN+LKNNGVK++LD N D Sbjct: 61 EVLAMRLKVDGLEQGQGRGIHADXKKEIEKKGFKNHTKIWAIVNSLKNNGVKLILDNNVD 120 Query: 407 N 409 + Sbjct: 121 D 121 >ref|NP_001238725.1| uncharacterized protein LOC100500222 [Glycine max] gi|255629748|gb|ACU15223.1| unknown [Glycine max] Length = 128 Score = 194 bits (492), Expect = 1e-47 Identities = 93/121 (76%), Positives = 108/121 (89%) Frame = +2 Query: 47 MTVMKRYVLRLFISLKYITANVVDRNNGRIVATASTIEHSLKEALECGRSCNXXXXXXVG 226 M VMKRYVLRLFISLKYITANVVDRNNGRIV ++ST EH++KE+LECGRSCN VG Sbjct: 1 MPVMKRYVLRLFISLKYITANVVDRNNGRIVVSSSTAEHTIKESLECGRSCNAKAAAVVG 60 Query: 227 EVLAMRLKVEGLDQGEGRGIHANVEKEIQKKGFKSQTKVWAIVNALKNNGVKVVLDGNDD 406 EVLA RLKVEGL++GEGRGIHAN+ KE+ KKGFK+QTKVWA+VNALKNNGVK++LD +DD Sbjct: 61 EVLARRLKVEGLNEGEGRGIHANITKEVGKKGFKNQTKVWAVVNALKNNGVKLILDDDDD 120 Query: 407 N 409 + Sbjct: 121 D 121