BLASTX nr result

ID: Coptis21_contig00011714 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011714
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327474.1| predicted protein [Populus trichocarpa] gi|2...   108   4e-22
ref|XP_002272986.1| PREDICTED: probable receptor-like protein ki...   108   6e-22
ref|XP_002523161.1| ATP binding protein, putative [Ricinus commu...   104   6e-21
emb|CBI33757.3| unnamed protein product [Vitis vinifera]              104   8e-21
ref|XP_002278799.1| PREDICTED: probable receptor-like protein ki...   103   2e-20

>ref|XP_002327474.1| predicted protein [Populus trichocarpa] gi|222836028|gb|EEE74449.1|
           predicted protein [Populus trichocarpa]
          Length = 826

 Score =  108 bits (270), Expect = 4e-22
 Identities = 58/119 (48%), Positives = 78/119 (65%), Gaps = 1/119 (0%)
 Frame = +3

Query: 81  LLLFTIQFSSLHLLVSSAFTPEDNYLINCGG-PDINITLNDNRNFIGDVTKPGSLFLSNT 257
           LLL ++   SL +  S++F+P DN+L+NCG   + + T  D+R F+ D TK G + LS  
Sbjct: 6   LLLLSLALLSL-ICFSTSFSPTDNFLVNCGSNTNTSFTPTDSRIFLPDSTKQGPVSLSKG 64

Query: 258 QSESLTDRNPVQNSSPLYQTARIFTKEFSYEFDIKRTGLHMVRLHFFPFLTQNHDLSSA 434
           QS SL ++NP  NS  LY TAR+FT   SY+F+IKR G H+VR HF PF  Q  DLS+A
Sbjct: 65  QSISLKNQNPSPNSPTLYSTARVFTTASSYQFNIKRNGTHLVRFHFSPFKAQGFDLSTA 123


>ref|XP_002272986.1| PREDICTED: probable receptor-like protein kinase At5g24010 [Vitis
           vinifera]
          Length = 822

 Score =  108 bits (269), Expect = 6e-22
 Identities = 62/123 (50%), Positives = 77/123 (62%)
 Frame = +3

Query: 66  HLLCILLLFTIQFSSLHLLVSSAFTPEDNYLINCGGPDINITLNDNRNFIGDVTKPGSLF 245
           H L + LL  + FSS       +FTP DN+LINCG    N T+ DNR F+GD  KP S+ 
Sbjct: 3   HFLSLTLLSLLHFSS-------SFTPLDNFLINCGSSS-NSTV-DNRVFVGDSAKPISVS 53

Query: 246 LSNTQSESLTDRNPVQNSSPLYQTARIFTKEFSYEFDIKRTGLHMVRLHFFPFLTQNHDL 425
           +S  +S SLTD NP   SS LY TAR+FT    YEF I++ G H VR HF+PF ++NH L
Sbjct: 54  VSAGKSISLTDSNPSPGSSNLYHTARVFTGASRYEFRIQQAGTHFVRFHFWPFNSRNHRL 113

Query: 426 SSA 434
            SA
Sbjct: 114 KSA 116


>ref|XP_002523161.1| ATP binding protein, putative [Ricinus communis]
           gi|223537568|gb|EEF39192.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 831

 Score =  104 bits (260), Expect = 6e-21
 Identities = 59/129 (45%), Positives = 79/129 (61%)
 Frame = +3

Query: 48  MDKKNHHLLCILLLFTIQFSSLHLLVSSAFTPEDNYLINCGGPDINITLNDNRNFIGDVT 227
           M+ K  H L ++      F SL    S++FTP DNYL+NCG    N +L DNR F+ D +
Sbjct: 1   METKALHFLSLV------FMSLLSSSSTSFTPTDNYLLNCGSTT-NTSL-DNRVFVSDSS 52

Query: 228 KPGSLFLSNTQSESLTDRNPVQNSSPLYQTARIFTKEFSYEFDIKRTGLHMVRLHFFPFL 407
           K G   LS  QS SLT++NP  N   L+ TAR+FT   SY+F+IK+ G H++R HF PF 
Sbjct: 53  KSGWFVLSTAQSISLTNQNPSPNLPSLHHTARVFTSSSSYKFNIKKNGTHLLRFHFSPFA 112

Query: 408 TQNHDLSSA 434
            Q  +LS+A
Sbjct: 113 AQTFNLSTA 121


>emb|CBI33757.3| unnamed protein product [Vitis vinifera]
          Length = 1825

 Score =  104 bits (259), Expect = 8e-21
 Identities = 64/127 (50%), Positives = 77/127 (60%), Gaps = 1/127 (0%)
 Frame = +3

Query: 33   SPLKKMDKKNH-HLLCILLLFTIQFSSLHLLVSSAFTPEDNYLINCGGPDINITLNDNRN 209
            S L  M+K  H HLL  LLL     SS +LL++S +T    Y INCG    N T+N  RN
Sbjct: 944  SQLVSMEKLGHQHLLFTLLLV---HSSSNLLLASGYTLPTQYFINCGSSS-NATVN-RRN 998

Query: 210  FIGDVTKPGSLFLSNTQSESLTDRNPVQNSSPLYQTARIFTKEFSYEFDIKRTGLHMVRL 389
            F+GDV  PGS + S   S+ L D NP   +SPLYQTARIF  E  YEF I   G ++VR 
Sbjct: 999  FVGDVN-PGSSYFSVRPSDDLKDGNPENGTSPLYQTARIFRNESWYEFRITENGTYVVRF 1057

Query: 390  HFFPFLT 410
            HF+PFLT
Sbjct: 1058 HFYPFLT 1064


>ref|XP_002278799.1| PREDICTED: probable receptor-like protein kinase At5g24010-like
           [Vitis vinifera]
          Length = 829

 Score =  103 bits (256), Expect = 2e-20
 Identities = 56/119 (47%), Positives = 74/119 (62%)
 Frame = +3

Query: 54  KKNHHLLCILLLFTIQFSSLHLLVSSAFTPEDNYLINCGGPDINITLNDNRNFIGDVTKP 233
           +K HH   +  L  + +SS +LL++S +T  + Y INCG    N T+ D RNF+GDV   
Sbjct: 2   EKLHHQDALFSLLLLLYSSSNLLLASGYTLPNKYFINCGS-SYNATV-DRRNFVGDVNS- 58

Query: 234 GSLFLSNTQSESLTDRNPVQNSSPLYQTARIFTKEFSYEFDIKRTGLHMVRLHFFPFLT 410
           GS + S  +S  L D +P   +SPLYQTAR F KE SYEF I   G ++VR HF+PFLT
Sbjct: 59  GSSYFSVRRSHVLKDGSPENGTSPLYQTARFFRKESSYEFQITENGTYVVRFHFYPFLT 117


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