BLASTX nr result
ID: Coptis21_contig00011687
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00011687 (238 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002511929.1| ATRAD3, putative [Ricinus communis] gi|22354... 58 7e-07 ref|XP_002301380.1| predicted protein [Populus trichocarpa] gi|2... 57 2e-06 emb|CBI40419.3| unnamed protein product [Vitis vinifera] 55 5e-06 emb|CAN73279.1| hypothetical protein VITISV_040608 [Vitis vinifera] 55 5e-06 ref|XP_002320162.1| predicted protein [Populus trichocarpa] gi|2... 55 8e-06 >ref|XP_002511929.1| ATRAD3, putative [Ricinus communis] gi|223549109|gb|EEF50598.1| ATRAD3, putative [Ricinus communis] Length = 615 Score = 58.2 bits (139), Expect = 7e-07 Identities = 27/31 (87%), Positives = 30/31 (96%) Frame = +2 Query: 125 LSNIGLGYAIAFALGFLVLLSTILLASYICC 217 L+N+GLGY+IA ALGFLVLLSTILLASYICC Sbjct: 27 LTNLGLGYSIAIALGFLVLLSTILLASYICC 57 >ref|XP_002301380.1| predicted protein [Populus trichocarpa] gi|222843106|gb|EEE80653.1| predicted protein [Populus trichocarpa] Length = 171 Score = 57.0 bits (136), Expect = 2e-06 Identities = 26/31 (83%), Positives = 30/31 (96%) Frame = +2 Query: 125 LSNIGLGYAIAFALGFLVLLSTILLASYICC 217 L+N+GLGY+IA ALGFLVL+STILLASYICC Sbjct: 18 LTNLGLGYSIAIALGFLVLVSTILLASYICC 48 >emb|CBI40419.3| unnamed protein product [Vitis vinifera] Length = 279 Score = 55.5 bits (132), Expect = 5e-06 Identities = 25/31 (80%), Positives = 28/31 (90%) Frame = +2 Query: 125 LSNIGLGYAIAFALGFLVLLSTILLASYICC 217 LSN+GLGYAIA A FLVLLST+LLASY+CC Sbjct: 85 LSNLGLGYAIAIAFAFLVLLSTVLLASYLCC 115 >emb|CAN73279.1| hypothetical protein VITISV_040608 [Vitis vinifera] Length = 641 Score = 55.5 bits (132), Expect = 5e-06 Identities = 25/31 (80%), Positives = 28/31 (90%) Frame = +2 Query: 125 LSNIGLGYAIAFALGFLVLLSTILLASYICC 217 LSN+GLGYAIA A FLVLLST+LLASY+CC Sbjct: 28 LSNLGLGYAIAIAFAFLVLLSTVLLASYLCC 58 >ref|XP_002320162.1| predicted protein [Populus trichocarpa] gi|222860935|gb|EEE98477.1| predicted protein [Populus trichocarpa] Length = 205 Score = 54.7 bits (130), Expect = 8e-06 Identities = 26/31 (83%), Positives = 29/31 (93%) Frame = +2 Query: 125 LSNIGLGYAIAFALGFLVLLSTILLASYICC 217 L+N+GLGY+IA AL FLVLLSTILLASYICC Sbjct: 24 LTNLGLGYSIAIALFFLVLLSTILLASYICC 54