BLASTX nr result

ID: Coptis21_contig00011687 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011687
         (238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511929.1| ATRAD3, putative [Ricinus communis] gi|22354...    58   7e-07
ref|XP_002301380.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
emb|CBI40419.3| unnamed protein product [Vitis vinifera]               55   5e-06
emb|CAN73279.1| hypothetical protein VITISV_040608 [Vitis vinifera]    55   5e-06
ref|XP_002320162.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06

>ref|XP_002511929.1| ATRAD3, putative [Ricinus communis] gi|223549109|gb|EEF50598.1|
           ATRAD3, putative [Ricinus communis]
          Length = 615

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/31 (87%), Positives = 30/31 (96%)
 Frame = +2

Query: 125 LSNIGLGYAIAFALGFLVLLSTILLASYICC 217
           L+N+GLGY+IA ALGFLVLLSTILLASYICC
Sbjct: 27  LTNLGLGYSIAIALGFLVLLSTILLASYICC 57


>ref|XP_002301380.1| predicted protein [Populus trichocarpa] gi|222843106|gb|EEE80653.1|
           predicted protein [Populus trichocarpa]
          Length = 171

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/31 (83%), Positives = 30/31 (96%)
 Frame = +2

Query: 125 LSNIGLGYAIAFALGFLVLLSTILLASYICC 217
           L+N+GLGY+IA ALGFLVL+STILLASYICC
Sbjct: 18  LTNLGLGYSIAIALGFLVLVSTILLASYICC 48


>emb|CBI40419.3| unnamed protein product [Vitis vinifera]
          Length = 279

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 25/31 (80%), Positives = 28/31 (90%)
 Frame = +2

Query: 125 LSNIGLGYAIAFALGFLVLLSTILLASYICC 217
           LSN+GLGYAIA A  FLVLLST+LLASY+CC
Sbjct: 85  LSNLGLGYAIAIAFAFLVLLSTVLLASYLCC 115


>emb|CAN73279.1| hypothetical protein VITISV_040608 [Vitis vinifera]
          Length = 641

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 25/31 (80%), Positives = 28/31 (90%)
 Frame = +2

Query: 125 LSNIGLGYAIAFALGFLVLLSTILLASYICC 217
           LSN+GLGYAIA A  FLVLLST+LLASY+CC
Sbjct: 28  LSNLGLGYAIAIAFAFLVLLSTVLLASYLCC 58


>ref|XP_002320162.1| predicted protein [Populus trichocarpa] gi|222860935|gb|EEE98477.1|
           predicted protein [Populus trichocarpa]
          Length = 205

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = +2

Query: 125 LSNIGLGYAIAFALGFLVLLSTILLASYICC 217
           L+N+GLGY+IA AL FLVLLSTILLASYICC
Sbjct: 24  LTNLGLGYSIAIALFFLVLLSTILLASYICC 54


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