BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011672
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002887646.1| chlorophyll A-B binding family protein [Arab...    91   7e-17
ref|NP_177783.1| putative chlorophyll a/b-binding protein [Arabi...    90   2e-16
ref|XP_002276647.1| PREDICTED: chlorophyll a-b binding protein o...    89   4e-16
ref|XP_004169873.1| PREDICTED: chlorophyll a-b binding protein o...    88   6e-16
ref|XP_004145567.1| PREDICTED: chlorophyll a-b binding protein o...    88   6e-16

>ref|XP_002887646.1| chlorophyll A-B binding family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297333487|gb|EFH63905.1| chlorophyll A-B
           binding family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 330

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 48/63 (76%), Positives = 52/63 (82%)
 Frame = -3

Query: 190 CRASWQELAGVLVFSAIPFTAVKAIANSSLGATLQKRLMETKASAVLNSSNFNASAQKAR 11
           CRASWQELAGVLVFSAIPFTAVKAIANSSLG +L++RL E K  AV NSS F A AQ+AR
Sbjct: 45  CRASWQELAGVLVFSAIPFTAVKAIANSSLGESLRRRLEEKKKEAVENSSRFKAKAQEAR 104

Query: 10  EYS 2
             S
Sbjct: 105 NDS 107


>ref|NP_177783.1| putative chlorophyll a/b-binding protein [Arabidopsis thaliana]
           gi|12323973|gb|AAG51944.1|AC015450_5 putative
           chlorophyll A-B binding protein; 65434-67056
           [Arabidopsis thaliana] gi|332197739|gb|AEE35860.1|
           putative chlorophyll a/b-binding protein [Arabidopsis
           thaliana]
          Length = 327

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 46/63 (73%), Positives = 52/63 (82%)
 Frame = -3

Query: 190 CRASWQELAGVLVFSAIPFTAVKAIANSSLGATLQKRLMETKASAVLNSSNFNASAQKAR 11
           CRASWQELAGVLVFSAIPFTAVKAIANSS+G +L++RL E K  AV NSS F + AQ+AR
Sbjct: 42  CRASWQELAGVLVFSAIPFTAVKAIANSSIGVSLRRRLEEKKKEAVENSSRFKSKAQEAR 101

Query: 10  EYS 2
             S
Sbjct: 102 NDS 104


>ref|XP_002276647.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
           chloroplastic [Vitis vinifera]
           gi|297745621|emb|CBI40786.3| unnamed protein product
           [Vitis vinifera]
          Length = 331

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 48/88 (54%), Positives = 57/88 (64%)
 Frame = -3

Query: 265 FGYRLLSKXXXXXXXXXXXXXXXXTCRASWQELAGVLVFSAIPFTAVKAIANSSLGATLQ 86
           + +RL SK                 C+ASWQELAGVL+FSAIPFTAVKAIANS LG +LQ
Sbjct: 20  YRHRLCSKISWPKSRNVNSTSTYSGCKASWQELAGVLIFSAIPFTAVKAIANSPLGESLQ 79

Query: 85  KRLMETKASAVLNSSNFNASAQKAREYS 2
            R+ E K +AV NSS F A A+KA+  S
Sbjct: 80  SRMEENKKAAVKNSSKFKALAEKAKNES 107


>ref|XP_004169873.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
           chloroplastic-like [Cucumis sativus]
          Length = 338

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 45/63 (71%), Positives = 53/63 (84%)
 Frame = -3

Query: 190 CRASWQELAGVLVFSAIPFTAVKAIANSSLGATLQKRLMETKASAVLNSSNFNASAQKAR 11
           CRASWQELAGVL+FSAIPFTAVKAIANS LG +LQ++L + K SAV NSS F A A++AR
Sbjct: 49  CRASWQELAGVLIFSAIPFTAVKAIANSPLGGSLQRQLEKKKNSAVANSSKFKALAEEAR 108

Query: 10  EYS 2
           + S
Sbjct: 109 KDS 111


>ref|XP_004145567.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
           chloroplastic-like [Cucumis sativus]
          Length = 338

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 45/63 (71%), Positives = 53/63 (84%)
 Frame = -3

Query: 190 CRASWQELAGVLVFSAIPFTAVKAIANSSLGATLQKRLMETKASAVLNSSNFNASAQKAR 11
           CRASWQELAGVL+FSAIPFTAVKAIANS LG +LQ++L + K SAV NSS F A A++AR
Sbjct: 49  CRASWQELAGVLIFSAIPFTAVKAIANSPLGGSLQRQLEKKKNSAVANSSKFKALAEEAR 108

Query: 10  EYS 2
           + S
Sbjct: 109 KDS 111