BLASTX nr result

ID: Coptis21_contig00011657 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011657
         (996 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268037.2| PREDICTED: clp protease-related protein At4g...   287   3e-75
emb|CAN60931.1| hypothetical protein VITISV_006813 [Vitis vinifera]   287   3e-75
ref|NP_001242487.1| uncharacterized protein LOC100786582 [Glycin...   278   2e-72
ref|XP_004148125.1| PREDICTED: clp protease-related protein At4g...   276   4e-72
ref|XP_003534040.1| PREDICTED: clp protease-related protein At4g...   275   2e-71

>ref|XP_002268037.2| PREDICTED: clp protease-related protein At4g12060,
           chloroplastic-like [Vitis vinifera]
           gi|296084123|emb|CBI24511.3| unnamed protein product
           [Vitis vinifera]
          Length = 231

 Score =  287 bits (734), Expect = 3e-75
 Identities = 140/199 (70%), Positives = 175/199 (87%)
 Frame = +3

Query: 186 LVNSLFGNQLSLHLTNSRPLIQKKRCAAFATISFSLPTAKPEKVSSEKAPKWSARAIKSF 365
           L +SL G +LS+  ++SR ++  +  +  AT+  SLPTAKPE+ SSEK PKWSARAIKSF
Sbjct: 33  LFSSLIGQKLSIQSSHSRLVVSTRYRSTVATVLLSLPTAKPERTSSEKVPKWSARAIKSF 92

Query: 366 AMGELEARKLKYPSTGTEAILMGILVEGTSLASKFLRANGITLFKVRDEIVKLLGKSDLY 545
           +M ELEARKLKYP+TGTEA+LMGILVEGTSLA+KFLRANGITLFKVR+E V LLGKSDLY
Sbjct: 93  SMAELEARKLKYPNTGTEALLMGILVEGTSLAAKFLRANGITLFKVREETVNLLGKSDLY 152

Query: 546 YFSPEHPPLTEPAQRALDYAIDEKLKSGDSGEITTTHLLLGIWSEKESAGYKIMATLGFD 725
           +FSPEHPPLTEPAQRALD+A+DEK+KSG+ GEITT+HLLLGIW+E+ESAG+KI+ATLGF+
Sbjct: 153 FFSPEHPPLTEPAQRALDWAVDEKIKSGEEGEITTSHLLLGIWAEEESAGHKILATLGFN 212

Query: 726 DEKAAELAKTKDEDVILNY 782
           D++A ELAK+ +++  L++
Sbjct: 213 DDQAKELAKSINKETDLSF 231


>emb|CAN60931.1| hypothetical protein VITISV_006813 [Vitis vinifera]
          Length = 231

 Score =  287 bits (734), Expect = 3e-75
 Identities = 140/199 (70%), Positives = 175/199 (87%)
 Frame = +3

Query: 186 LVNSLFGNQLSLHLTNSRPLIQKKRCAAFATISFSLPTAKPEKVSSEKAPKWSARAIKSF 365
           L +SL G +LS+  ++SR ++  +  +  AT+  SLPTAKPE+ SSEK PKWSARAIKSF
Sbjct: 33  LXSSLIGQKLSIQSSHSRLVVSTRYRSTVATVLLSLPTAKPERTSSEKVPKWSARAIKSF 92

Query: 366 AMGELEARKLKYPSTGTEAILMGILVEGTSLASKFLRANGITLFKVRDEIVKLLGKSDLY 545
           +M ELEARKLKYP+TGTEA+LMGILVEGTSLA+KFLRANGITLFKVR+E V LLGKSDLY
Sbjct: 93  SMAELEARKLKYPNTGTEALLMGILVEGTSLAAKFLRANGITLFKVREETVNLLGKSDLY 152

Query: 546 YFSPEHPPLTEPAQRALDYAIDEKLKSGDSGEITTTHLLLGIWSEKESAGYKIMATLGFD 725
           +FSPEHPPLTEPAQRALD+A+DEK+KSG+ GEITT+HLLLGIW+E+ESAG+KI+ATLGF+
Sbjct: 153 FFSPEHPPLTEPAQRALDWAVDEKIKSGEEGEITTSHLLLGIWAEEESAGHKILATLGFN 212

Query: 726 DEKAAELAKTKDEDVILNY 782
           D++A ELAK+ +++  L++
Sbjct: 213 DDQAKELAKSINKETDLSF 231


>ref|NP_001242487.1| uncharacterized protein LOC100786582 [Glycine max]
           gi|255639105|gb|ACU19852.1| unknown [Glycine max]
          Length = 260

 Score =  278 bits (710), Expect = 2e-72
 Identities = 143/199 (71%), Positives = 169/199 (84%), Gaps = 2/199 (1%)
 Frame = +3

Query: 195 SLFGNQLSL-HLTNSRPLIQKKRC-AAFATISFSLPTAKPEKVSSEKAPKWSARAIKSFA 368
           SLFG +++L   T+S   +    C A  AT+SFSLPT KP   + EK PKWSARAIKS+A
Sbjct: 59  SLFGTRITLLRATSSSRSLPNTNCRATSATVSFSLPTPKPLSDTPEKTPKWSARAIKSYA 118

Query: 369 MGELEARKLKYPSTGTEAILMGILVEGTSLASKFLRANGITLFKVRDEIVKLLGKSDLYY 548
           MGELEARKLKYP+TGTEA+LMGILVEGTS A+KFLRANGITLFKVR+E V+LLGKSDLY+
Sbjct: 119 MGELEARKLKYPNTGTEALLMGILVEGTSKAAKFLRANGITLFKVREETVELLGKSDLYF 178

Query: 549 FSPEHPPLTEPAQRALDYAIDEKLKSGDSGEITTTHLLLGIWSEKESAGYKIMATLGFDD 728
           FSPEHPPLTEPAQ+ALD+AI+EKLKSG+ GEI+ THLLLGIWS+KESAG +I+ TLGF+D
Sbjct: 179 FSPEHPPLTEPAQKALDWAIEEKLKSGEGGEISVTHLLLGIWSQKESAGQQILDTLGFND 238

Query: 729 EKAAELAKTKDEDVILNYR 785
           EKA ELAKT D DV L+++
Sbjct: 239 EKAKELAKTIDGDVDLSFK 257


>ref|XP_004148125.1| PREDICTED: clp protease-related protein At4g12060,
           chloroplastic-like [Cucumis sativus]
           gi|449499662|ref|XP_004160878.1| PREDICTED: clp
           protease-related protein At4g12060, chloroplastic-like
           [Cucumis sativus]
          Length = 234

 Score =  276 bits (707), Expect = 4e-72
 Identities = 144/210 (68%), Positives = 173/210 (82%), Gaps = 1/210 (0%)
 Frame = +3

Query: 159 SLGCNKPDWLVNSLFGNQLSLHLTNS-RPLIQKKRCAAFATISFSLPTAKPEKVSSEKAP 335
           SL    P + ++ L   +L++  +N+  P+++  R A  AT+SFSLP +KPE V  EK P
Sbjct: 26  SLEHKPPLFPLSPLIQLKLAIKRSNATHPVLKFSRRATTATVSFSLPASKPEGVPPEKLP 85

Query: 336 KWSARAIKSFAMGELEARKLKYPSTGTEAILMGILVEGTSLASKFLRANGITLFKVRDEI 515
           KWSARAIKSFAMGELEARKLKYP+TGTEA+LMGIL+EGTS A+KFLRANGITLFKVR+E 
Sbjct: 86  KWSARAIKSFAMGELEARKLKYPNTGTEALLMGILIEGTSTAAKFLRANGITLFKVREET 145

Query: 516 VKLLGKSDLYYFSPEHPPLTEPAQRALDYAIDEKLKSGDSGEITTTHLLLGIWSEKESAG 695
           VKLLGK+D+Y+ SPEHPPLTEPAQ+ALD+A+ EKLKSG SGEITT HLLLGIWSE ESAG
Sbjct: 146 VKLLGKADMYFCSPEHPPLTEPAQKALDWAVAEKLKSGQSGEITTGHLLLGIWSE-ESAG 204

Query: 696 YKIMATLGFDDEKAAELAKTKDEDVILNYR 785
            KI+ATLGFDDEKA E+AKT D+D   +Y+
Sbjct: 205 RKILATLGFDDEKAKEIAKTVDKDATFSYK 234


>ref|XP_003534040.1| PREDICTED: clp protease-related protein At4g12060,
           chloroplastic-like [Glycine max]
          Length = 252

 Score =  275 bits (702), Expect = 2e-71
 Identities = 141/199 (70%), Positives = 168/199 (84%), Gaps = 2/199 (1%)
 Frame = +3

Query: 195 SLFGNQLSL-HLTNSRPLIQKKRC-AAFATISFSLPTAKPEKVSSEKAPKWSARAIKSFA 368
           SLFG +++L   T+S   +    C A  AT+SFSLPT KP   + EK PKWSARAIKS+A
Sbjct: 51  SLFGTRITLLRATSSSRSLPNTNCRATSATVSFSLPTPKPLSDTPEKTPKWSARAIKSYA 110

Query: 369 MGELEARKLKYPSTGTEAILMGILVEGTSLASKFLRANGITLFKVRDEIVKLLGKSDLYY 548
           MGELEARKLKYP+TGTEA+LMGILVEGTS A+KF RANGITLFKVR+E V+LLGKSDLY+
Sbjct: 111 MGELEARKLKYPNTGTEALLMGILVEGTSKAAKFSRANGITLFKVREETVELLGKSDLYF 170

Query: 549 FSPEHPPLTEPAQRALDYAIDEKLKSGDSGEITTTHLLLGIWSEKESAGYKIMATLGFDD 728
           FSPEHPPLTEPAQ+ALD+AI+EKLKSG+ GEI  THLLLGIWS+KESAG +I+ATLGF+D
Sbjct: 171 FSPEHPPLTEPAQKALDWAIEEKLKSGEGGEINVTHLLLGIWSQKESAGQQILATLGFND 230

Query: 729 EKAAELAKTKDEDVILNYR 785
           EKA EL+K+ D DV L+++
Sbjct: 231 EKAKELSKSIDGDVDLSFK 249


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