BLASTX nr result

ID: Coptis21_contig00011604 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011604
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281195.1| PREDICTED: disease resistance protein RPS5-l...    77   4e-16
emb|CBI36247.3| unnamed protein product [Vitis vinifera]               77   4e-16
emb|CAN62044.1| hypothetical protein VITISV_040356 [Vitis vinifera]    78   2e-15
ref|XP_002278676.2| PREDICTED: probable disease resistance prote...    70   4e-15
ref|XP_002278567.1| PREDICTED: probable disease resistance prote...    70   7e-15

>ref|XP_002281195.1| PREDICTED: disease resistance protein RPS5-like [Vitis vinifera]
          Length = 918

 Score = 77.0 bits (188), Expect(2) = 4e-16
 Identities = 42/91 (46%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
 Frame = +1

Query: 25   LHVKRCLRLEEIISDEFGAFDAS---LFSKLTTLVLDDLPCLWSIWRSPLPFLSLKLMVV 195
            L ++ C+ ++E+IS E+GA       LF++LTTLVL  +P L SI++  L F +L+++ V
Sbjct: 784  LSIQSCVSMKEVISYEYGASTTQHVRLFTRLTTLVLGGMPLLESIYQGTLLFPALEVISV 843

Query: 196  LNCPKLRRLPFDSNSAKDKLEKITGSGGKTW 288
            +NCPKL RLPF +NSA   L+KI   G  TW
Sbjct: 844  INCPKLGRLPFGANSAAKSLKKI--EGDTTW 872



 Score = 32.3 bits (72), Expect(2) = 4e-16
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 273 WWENLEWDNETIEREFAPYLS 335
           WW  L+W++ETIE  F  Y S
Sbjct: 872 WWYGLQWEDETIELTFTKYFS 892


>emb|CBI36247.3| unnamed protein product [Vitis vinifera]
          Length = 302

 Score = 77.0 bits (188), Expect(2) = 4e-16
 Identities = 42/91 (46%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
 Frame = +1

Query: 25  LHVKRCLRLEEIISDEFGAFDAS---LFSKLTTLVLDDLPCLWSIWRSPLPFLSLKLMVV 195
           L ++ C+ ++E+IS E+GA       LF++LTTLVL  +P L SI++  L F +L+++ V
Sbjct: 149 LSIQSCVSMKEVISYEYGASTTQHVRLFTRLTTLVLGGMPLLESIYQGTLLFPALEVISV 208

Query: 196 LNCPKLRRLPFDSNSAKDKLEKITGSGGKTW 288
           +NCPKL RLPF +NSA   L+KI   G  TW
Sbjct: 209 INCPKLGRLPFGANSAAKSLKKI--EGDTTW 237



 Score = 32.3 bits (72), Expect(2) = 4e-16
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 273 WWENLEWDNETIEREFAPYLS 335
           WW  L+W++ETIE  F  Y S
Sbjct: 237 WWYGLQWEDETIELTFTKYFS 257


>emb|CAN62044.1| hypothetical protein VITISV_040356 [Vitis vinifera]
          Length = 1302

 Score = 77.8 bits (190), Expect(2) = 2e-15
 Identities = 44/91 (48%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
 Frame = +1

Query: 25   LHVKRCLRLEEIISDEF---GAFDASLFSKLTTLVLDDLPCLWSIWRSPLPFLSLKLMVV 195
            L+V+ C  ++E+IS+E+       AS+F++LT+LVL  +P L SI+R  L F SL+++ V
Sbjct: 1105 LNVQFCESMKEVISNEYVTSSTQHASIFTRLTSLVLGGMPMLESIYRGALLFPSLEIICV 1164

Query: 196  LNCPKLRRLPFDSNSAKDKLEKITGSGGKTW 288
            +NCPKLRRLP DS SA   L+KI   G  TW
Sbjct: 1165 INCPKLRRLPIDSISAAKSLKKI--EGDLTW 1193



 Score = 29.3 bits (64), Expect(2) = 2e-15
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 273  WWENLEWDNETIEREFAPYLS 335
            WW  LEW++E++E     Y S
Sbjct: 1193 WWRRLEWEDESVEEIVTNYFS 1213


>ref|XP_002278676.2| PREDICTED: probable disease resistance protein At5g63020-like [Vitis
            vinifera]
          Length = 895

 Score = 70.1 bits (170), Expect(2) = 4e-15
 Identities = 42/96 (43%), Positives = 58/96 (60%), Gaps = 1/96 (1%)
 Frame = +1

Query: 10   PNIGVLHVKRCLRLEEIISDEFGAFD-ASLFSKLTTLVLDDLPCLWSIWRSPLPFLSLKL 186
            P++ +L V RC  ++E+I D     +   +FS+L  L L  LP L SI R  LPF SLK 
Sbjct: 766  PSLELLSVHRCESMKEVIGDASEVPENLGIFSRLEGLTLHYLPNLRSISRRALPFPSLKT 825

Query: 187  MVVLNCPKLRRLPFDSNSAKDKLEKITGSGGKTWSG 294
            + V  CP LR+LP DSNSA++ L+ I G+  + W G
Sbjct: 826  LRVTKCPNLRKLPLDSNSARNSLKIIEGT-SEWWRG 860



 Score = 35.8 bits (81), Expect(2) = 4e-15
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +3

Query: 270 KWWENLEWDNETIEREFAPYLS 335
           +WW  L+W++ETI+  F PYL+
Sbjct: 856 EWWRGLQWEDETIQLTFTPYLN 877


>ref|XP_002278567.1| PREDICTED: probable disease resistance protein At5g63020-like [Vitis
            vinifera]
          Length = 909

 Score = 70.5 bits (171), Expect(2) = 7e-15
 Identities = 42/96 (43%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
 Frame = +1

Query: 10   PNIGVLHVKRCLRLEEIISDEFGA-FDASLFSKLTTLVLDDLPCLWSIWRSPLPFLSLKL 186
            P++  L V  C  +EE+I D  G   +  +FS+L  L L +LP L SI R  L F SL+ 
Sbjct: 798  PSLEQLFVHECESMEEVIGDASGVPQNLGIFSRLKGLNLHNLPNLRSISRRALSFPSLRY 857

Query: 187  MVVLNCPKLRRLPFDSNSAKDKLEKITGSGGKTWSG 294
            + V  CP LR+LP DSNSA++ L+ I G   K W G
Sbjct: 858  LQVRECPNLRKLPLDSNSARNSLKSIRGE-SKWWQG 892



 Score = 34.7 bits (78), Expect(2) = 7e-15
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +3

Query: 270 KWWENLEWDNETIEREFAPY 329
           KWW+ L+W++ET +  F PY
Sbjct: 888 KWWQGLQWEDETFQLTFTPY 907


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