BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011602
         (1270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62867.1| hypothetical protein VITISV_015925 [Vitis vinifera]   365   1e-98
ref|XP_002305447.1| chromatin remodeling complex subunit [Populu...   363   5e-98
ref|XP_002336506.1| hypothetical protein POPTRDRAFT_592433 [Popu...   363   5e-98
ref|XP_002273814.1| PREDICTED: DNA repair and recombination prot...   363   7e-98
ref|XP_003540522.1| PREDICTED: DNA repair protein rhp54-like [Gl...   362   1e-97

>emb|CAN62867.1| hypothetical protein VITISV_015925 [Vitis vinifera]
          Length = 1187

 Score =  365 bits (938), Expect = 1e-98
 Identities = 184/300 (61%), Positives = 229/300 (76%), Gaps = 3/300 (1%)
 Frame = +1

Query: 1    TVIQDLREMTSNVLHYYRGDFLDELPGLVDCTVLLNLSPKQRHIIESLKKLEM-FKKTSI 177
            TVIQDLREMTS VLHYY+GDFLDELPGLVD TVLLNLS +Q+  + +L K E  FKK S+
Sbjct: 830  TVIQDLREMTSKVLHYYKGDFLDELPGLVDFTVLLNLSARQKKEVGNLNKFERKFKKNSV 889

Query: 178  GTAVYLHPLLKEVSEGAGMGDKGC--RFNEEKLEKLLSKMDIREGVKAKFFLRILGLCES 351
            G+AVYLHP LK  +E     +        ++K++++L ++D+R+GVKAKFFL +L LC+S
Sbjct: 890  GSAVYLHPQLKYFAEKLAANESKTDEMTCQKKMDEILEQLDVRDGVKAKFFLNVLALCQS 949

Query: 352  SGERLLVFSQYRLPLKFMERLVVHTKGWRVGKEIFMITGXXXXXXXXXXXXXFNSSADAK 531
            SGE+LLVFSQY LPL+F+E+L +  KGW  GKEIF I+G             FN+S DA+
Sbjct: 950  SGEKLLVFSQYLLPLRFLEKLTMKVKGWSPGKEIFAISGESSSEQREWSMERFNTSPDAR 1009

Query: 532  VFFGSIKACGEGISLVGASRILIMDVHLNPSVTRQAIGRAFRPGQVRKVFTYRLVASDSP 711
            VFFGSIKACGEGISLVGASR+LI+DVHLNPSVTRQAIGRAFRPGQ +KV  Y+LVA+DSP
Sbjct: 1010 VFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQKKKVHVYKLVAADSP 1069

Query: 712  EEENYNTSCRKELVSKMWFEWRELSGSPNFEMEAIDLNQSGDDFWGNHSLREDVKDVYRR 891
            EEE++N+  +KEL+SKMWFEW E  G   FE E +D++ SGD F  +  LRED+K +YRR
Sbjct: 1070 EEEDHNSCFKKELISKMWFEWNEYCGHHEFEAETVDVSDSGDIFLESPLLREDIKVLYRR 1129


>ref|XP_002305447.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222848411|gb|EEE85958.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 630

 Score =  363 bits (932), Expect = 5e-98
 Identities = 182/298 (61%), Positives = 230/298 (77%), Gaps = 1/298 (0%)
 Frame = +1

Query: 1    TVIQDLREMTSNVLHYYRGDFLDELPGLVDCTVLLNLSPKQRHIIESLKKLEM-FKKTSI 177
            TVI+DL EMTS VLHYY+GDFLDELPGLVD T++LNLS +Q+H ++ LKKL M FK++S+
Sbjct: 340  TVIRDLHEMTSKVLHYYKGDFLDELPGLVDFTLMLNLSSRQKHEVKKLKKLAMKFKRSSV 399

Query: 178  GTAVYLHPLLKEVSEGAGMGDKGCRFNEEKLEKLLSKMDIREGVKAKFFLRILGLCESSG 357
            G+AVYLHP L   S+ + + D       + ++ LL  +D+R+GVKAKFFL IL LCES+G
Sbjct: 400  GSAVYLHPKLNSFSKNSAITD-------DMMDDLLETVDVRDGVKAKFFLNILSLCESAG 452

Query: 358  ERLLVFSQYRLPLKFMERLVVHTKGWRVGKEIFMITGXXXXXXXXXXXXXFNSSADAKVF 537
            E+LLVFSQY  PLKF+ERLV+  KGW +GKEIF+I+G             FN+S DAKVF
Sbjct: 453  EKLLVFSQYLTPLKFLERLVMKVKGWILGKEIFVISGESSSDHREWSMERFNNSMDAKVF 512

Query: 538  FGSIKACGEGISLVGASRILIMDVHLNPSVTRQAIGRAFRPGQVRKVFTYRLVASDSPEE 717
            FGSIKACGEGISLVGASRI+I+DVHLNPSVT QAIGRAFRPGQ +KV+ YRLVA+DSPEE
Sbjct: 513  FGSIKACGEGISLVGASRIIILDVHLNPSVTCQAIGRAFRPGQTKKVYAYRLVAADSPEE 572

Query: 718  ENYNTSCRKELVSKMWFEWRELSGSPNFEMEAIDLNQSGDDFWGNHSLREDVKDVYRR 891
            E++ T  RKE ++KMWFEW E  G  +FE+  ++L+ SGD F  +  +REDV+ +Y+R
Sbjct: 573  EDHTTCFRKEAIAKMWFEWNEYCGYQDFEVGTVELDDSGDRFLESLLVREDVRVLYKR 630


>ref|XP_002336506.1| hypothetical protein POPTRDRAFT_592433 [Populus trichocarpa]
           gi|222835795|gb|EEE74230.1| hypothetical protein
           POPTRDRAFT_592433 [Populus trichocarpa]
          Length = 387

 Score =  363 bits (932), Expect = 5e-98
 Identities = 181/297 (60%), Positives = 229/297 (77%), Gaps = 1/297 (0%)
 Frame = +1

Query: 1   TVIQDLREMTSNVLHYYRGDFLDELPGLVDCTVLLNLSPKQRHIIESLKKLE-MFKKTSI 177
           TVI+DLREMTS VLHYY+GDFLDELPGLVD TV+LNLS KQ+H ++ LKK    FK++S+
Sbjct: 51  TVIRDLREMTSKVLHYYKGDFLDELPGLVDFTVVLNLSSKQKHEVQKLKKFAGKFKRSSV 110

Query: 178 GTAVYLHPLLKEVSEGAGMGDKGCRFNEEKLEKLLSKMDIREGVKAKFFLRILGLCESSG 357
           G+AVYLHP L   SE + + D       + ++ LL  +D+R+G KAKFFL IL LC+S+G
Sbjct: 111 GSAVYLHPKLHSFSENSAVTD-------DMMDNLLETLDVRDGAKAKFFLNILSLCKSAG 163

Query: 358 ERLLVFSQYRLPLKFMERLVVHTKGWRVGKEIFMITGXXXXXXXXXXXXXFNSSADAKVF 537
           E+LLVFSQY  PLKF+ERLV+  KGW +GK+IF+I+G             FN+S DAKVF
Sbjct: 164 EKLLVFSQYLTPLKFLERLVMKVKGWILGKDIFVISGESSSDHREWSMDRFNNSIDAKVF 223

Query: 538 FGSIKACGEGISLVGASRILIMDVHLNPSVTRQAIGRAFRPGQVRKVFTYRLVASDSPEE 717
           FGSIKACGEGISLVGASRI+I+DVHLNPSVTRQAIGRAFRPGQ +KV+ YRLVA+DSPEE
Sbjct: 224 FGSIKACGEGISLVGASRIIILDVHLNPSVTRQAIGRAFRPGQTKKVYAYRLVAADSPEE 283

Query: 718 ENYNTSCRKELVSKMWFEWRELSGSPNFEMEAIDLNQSGDDFWGNHSLREDVKDVYR 888
           E++ T  RKE ++KMWFEW E  G  +FE+E ++L+ SGD F  +  +R+DV+ +Y+
Sbjct: 284 EDHTTCFRKEAIAKMWFEWNEYCGYQDFEVETVELDDSGDCFLESLLVRDDVRLLYK 340


>ref|XP_002273814.1| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
            vinifera]
          Length = 903

 Score =  363 bits (931), Expect = 7e-98
 Identities = 183/300 (61%), Positives = 228/300 (76%), Gaps = 3/300 (1%)
 Frame = +1

Query: 1    TVIQDLREMTSNVLHYYRGDFLDELPGLVDCTVLLNLSPKQRHIIESLKKLEM-FKKTSI 177
            TVIQDLREMTS VLHYY+GDFLDELPGLVD TVLLNLS +Q+  + +L K E  FKK S+
Sbjct: 604  TVIQDLREMTSKVLHYYKGDFLDELPGLVDFTVLLNLSARQKKEVGNLNKFERKFKKNSV 663

Query: 178  GTAVYLHPLLKEVSEGAGMGDKGC--RFNEEKLEKLLSKMDIREGVKAKFFLRILGLCES 351
            G+AVYLHP LK  +E     +        ++K++++L ++D+R+GVKAKFFL +L LC+S
Sbjct: 664  GSAVYLHPQLKYFAEKLAANESKTDEMTCQKKMDEILEQLDVRDGVKAKFFLNVLALCQS 723

Query: 352  SGERLLVFSQYRLPLKFMERLVVHTKGWRVGKEIFMITGXXXXXXXXXXXXXFNSSADAK 531
            SGE+LLVFSQY LPL+F+E+L +  KGW  GKEIF I+G             FN+S DA+
Sbjct: 724  SGEKLLVFSQYLLPLRFLEKLTMKVKGWSPGKEIFAISGESSSEQREWSMERFNTSPDAR 783

Query: 532  VFFGSIKACGEGISLVGASRILIMDVHLNPSVTRQAIGRAFRPGQVRKVFTYRLVASDSP 711
            VFFGSIKACGEGISLVGASR+LI+DVHLNPSVTRQAIGRAFRPGQ +KV  Y+LVA+DSP
Sbjct: 784  VFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQKKKVHVYKLVAADSP 843

Query: 712  EEENYNTSCRKELVSKMWFEWRELSGSPNFEMEAIDLNQSGDDFWGNHSLREDVKDVYRR 891
            EEE++N+  +KEL+SKMWFEW E  G   FE E +D++ SGD F  +  LRED+  +YRR
Sbjct: 844  EEEDHNSCFKKELISKMWFEWNEYCGHHEFEAETVDVSDSGDLFLESPLLREDITVLYRR 903


>ref|XP_003540522.1| PREDICTED: DNA repair protein rhp54-like [Glycine max]
          Length = 883

 Score =  362 bits (928), Expect = 1e-97
 Identities = 181/298 (60%), Positives = 230/298 (77%), Gaps = 2/298 (0%)
 Frame = +1

Query: 4    VIQDLREMTSNVLHYYRGDFLDELPGLVDCTVLLNLSPKQRHIIESLKKLEM--FKKTSI 177
            VIQDLREMTS VLHYY+GDFLDELPGLVD TV+L LSP+Q+  I+ LKKL    FK  S+
Sbjct: 590  VIQDLREMTSKVLHYYKGDFLDELPGLVDFTVVLTLSPRQKPEIQKLKKLSRRKFKINSV 649

Query: 178  GTAVYLHPLLKEVSEGAGMGDKGCRFNEEKLEKLLSKMDIREGVKAKFFLRILGLCESSG 357
            G+AVYLHP LK ++E  G        ++  ++ L+ K+D+R+GVK+KF+  +L LCES+G
Sbjct: 650  GSAVYLHPKLKPLAENCGENST----SDNIMDDLIEKLDMRDGVKSKFYYNMLNLCESAG 705

Query: 358  ERLLVFSQYRLPLKFMERLVVHTKGWRVGKEIFMITGXXXXXXXXXXXXXFNSSADAKVF 537
            E+LLVFSQY LPLK++ERL +  KGW +G+EIF+I+G             FN+S DA+VF
Sbjct: 706  EKLLVFSQYLLPLKYLERLTMKWKGWSLGREIFVISGESSSEQREWSMEKFNNSPDARVF 765

Query: 538  FGSIKACGEGISLVGASRILIMDVHLNPSVTRQAIGRAFRPGQVRKVFTYRLVASDSPEE 717
            FGSIKACGEGISLVGASRI+I+DVHLNPSVTRQAIGRAFRPGQ++KVF YRLV++DSPEE
Sbjct: 766  FGSIKACGEGISLVGASRIIILDVHLNPSVTRQAIGRAFRPGQMKKVFVYRLVSADSPEE 825

Query: 718  ENYNTSCRKELVSKMWFEWRELSGSPNFEMEAIDLNQSGDDFWGNHSLREDVKDVYRR 891
            E++NT  +KEL+SKMWFEW E  G   FE+EA+++ + GD F  +  L EDVK +Y+R
Sbjct: 826  EDHNTCFKKELISKMWFEWNEYCGDRAFEVEAVEVKECGDLFLESPLLGEDVKALYKR 883