BLASTX nr result

ID: Coptis21_contig00011576 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011576
         (1030 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551829.1| PREDICTED: uncharacterized protein LOC100805...   313   6e-83
ref|XP_002278885.1| PREDICTED: uncharacterized protein LOC100241...   311   1e-82
ref|XP_002315223.1| predicted protein [Populus trichocarpa] gi|2...   310   3e-82
ref|XP_002530859.1| conserved hypothetical protein [Ricinus comm...   309   6e-82
ref|XP_003518644.1| PREDICTED: uncharacterized protein LOC100780...   308   1e-81

>ref|XP_003551829.1| PREDICTED: uncharacterized protein LOC100805554 [Glycine max]
          Length = 229

 Score =  313 bits (801), Expect = 6e-83
 Identities = 160/213 (75%), Positives = 177/213 (83%), Gaps = 5/213 (2%)
 Frame = -2

Query: 864 PNQQSSETTSNPAFKPSSEVKGLRFGGQFIVKSFTVRRXXXXXXXXXXXLPISNNQNHSK 685
           PN QS++  S+ +FKPSSEVKG++FGGQFIVKSFT+RR            P +NN N  K
Sbjct: 18  PNDQSTKQNSDFSFKPSSEVKGIKFGGQFIVKSFTIRRARPLELLKVLSFPPTNNTNKPK 77

Query: 684 TKHHPFLSTTAFLPTNFTILAHHAWHTLTLGLGTKKSKVLLFVFESESMKAAVDRIWPPE 505
            K  PF STTAFLPTNFTILAHHAWHTLTLGLGTKKSKVLLFVFE+E+MKA+VDRIWPPE
Sbjct: 78  DKL-PFPSTTAFLPTNFTILAHHAWHTLTLGLGTKKSKVLLFVFETEAMKASVDRIWPPE 136

Query: 504 IPLGDVNGKLIRGLKGCEMARFKFRKGCITFYVYAVRRVGSQGFYCAEDLRTILQSVVEL 325
           I LGDVN +LIRGL GCEMARFKFRKGCITFYVYAVR+VGS GF CAEDLRTILQSVVEL
Sbjct: 137 IALGDVNKRLIRGLNGCEMARFKFRKGCITFYVYAVRQVGSFGFSCAEDLRTILQSVVEL 196

Query: 324 KDFMDHTAMLALPSQRSISYS-----PPVAMAH 241
           KDF+DHT ML++P+QRSISYS     P VAMAH
Sbjct: 197 KDFLDHTVMLSMPNQRSISYSQSQSQPQVAMAH 229


>ref|XP_002278885.1| PREDICTED: uncharacterized protein LOC100241117 [Vitis vinifera]
           gi|147866524|emb|CAN83699.1| hypothetical protein
           VITISV_027545 [Vitis vinifera]
           gi|296086238|emb|CBI31679.3| unnamed protein product
           [Vitis vinifera]
          Length = 224

 Score =  311 bits (798), Expect = 1e-82
 Identities = 155/208 (74%), Positives = 174/208 (83%)
 Frame = -2

Query: 864 PNQQSSETTSNPAFKPSSEVKGLRFGGQFIVKSFTVRRXXXXXXXXXXXLPISNNQNHSK 685
           PN Q+++ +S+ AFK SSEVKGLRFGGQFIVKSFT+RR            P +N+     
Sbjct: 17  PNDQTTKPSSDFAFKLSSEVKGLRFGGQFIVKSFTIRRARPLELLKVLSFPPTNHHKDKT 76

Query: 684 TKHHPFLSTTAFLPTNFTILAHHAWHTLTLGLGTKKSKVLLFVFESESMKAAVDRIWPPE 505
               PF STTAFLPTNFTILAHHAWHTLTLGLGTKKSKVLLFVFESE++K AVDR+WPPE
Sbjct: 77  KAKLPFPSTTAFLPTNFTILAHHAWHTLTLGLGTKKSKVLLFVFESENLKVAVDRVWPPE 136

Query: 504 IPLGDVNGKLIRGLKGCEMARFKFRKGCITFYVYAVRRVGSQGFYCAEDLRTILQSVVEL 325
           IPLG+VN KLIRGL G EMARFKFRKGCITFYVYAVRRVG+ GF CA+DLRTILQSVVEL
Sbjct: 137 IPLGEVNKKLIRGLTGYEMARFKFRKGCITFYVYAVRRVGNLGFSCADDLRTILQSVVEL 196

Query: 324 KDFMDHTAMLALPSQRSISYSPPVAMAH 241
           KDF+DHTAMLA+P QRSI+++PPVAMAH
Sbjct: 197 KDFLDHTAMLAMPHQRSIAFAPPVAMAH 224


>ref|XP_002315223.1| predicted protein [Populus trichocarpa] gi|222864263|gb|EEF01394.1|
           predicted protein [Populus trichocarpa]
          Length = 224

 Score =  310 bits (795), Expect = 3e-82
 Identities = 161/210 (76%), Positives = 176/210 (83%), Gaps = 2/210 (0%)
 Frame = -2

Query: 864 PNQQSSETTSNPAFKPSSEVKGLRFGGQFIVKSFTVRRXXXXXXXXXXXLPISN-NQNHS 688
           PNQQ+S+ +S+ +FKPSSEVKGLRFGGQFIVKSFT+RR            P +N N N+S
Sbjct: 18  PNQQTSKPSSDFSFKPSSEVKGLRFGGQFIVKSFTIRRARPLELLKVLSYPATNKNSNNS 77

Query: 687 KTKHHPFLSTTAFLPTNFTILAHHAWHTLTLGLGTKKSKVLLFVFESESMKAAVDRIWPP 508
           K     F STTAFLPTNFTILAHHAWHTLTLGLGTKKSKVLLFVFESESMK AVDRIWPP
Sbjct: 78  KAA---FPSTTAFLPTNFTILAHHAWHTLTLGLGTKKSKVLLFVFESESMKLAVDRIWPP 134

Query: 507 EIPLGDVNGKLIRGLKGCEMARFKFRKGCITFYVYAVRRVGSQGFYCAEDLRTILQSVVE 328
           EIPLG+VN KLIRGL GCEMARFKFRKGCITFYVYAVRRVG+ GF CA+DL+ ILQSVV 
Sbjct: 135 EIPLGEVNKKLIRGLNGCEMARFKFRKGCITFYVYAVRRVGNLGFSCADDLKMILQSVVA 194

Query: 327 LKDFMDHTAMLALPSQRSISY-SPPVAMAH 241
           L DF+DHTAMLA+P QRSI+Y SP VAMAH
Sbjct: 195 LNDFLDHTAMLAMPHQRSINYASPQVAMAH 224


>ref|XP_002530859.1| conserved hypothetical protein [Ricinus communis]
           gi|223529583|gb|EEF31533.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 229

 Score =  309 bits (792), Expect = 6e-82
 Identities = 157/213 (73%), Positives = 175/213 (82%), Gaps = 5/213 (2%)
 Frame = -2

Query: 864 PNQQSSETTSNPAFKPSSEVKGLRFGGQFIVKSFTVRRXXXXXXXXXXXLPISNNQNHSK 685
           PN Q+++ TS+ +FKPSSEVKGLRFGGQFI+KSFT+RR            P +N+ N S 
Sbjct: 17  PNDQTTKPTSDFSFKPSSEVKGLRFGGQFIIKSFTIRRARPLELLKVLSYPPTNSNNSSS 76

Query: 684 TKHH----PFLSTTAFLPTNFTILAHHAWHTLTLGLGTKKSKVLLFVFESESMKAAVDRI 517
            K+     PF STTAFLPTNFTILAHHAWHTLTLGLGTKKSKVL+FVFESESMK A DRI
Sbjct: 77  NKNGTTKIPFPSTTAFLPTNFTILAHHAWHTLTLGLGTKKSKVLVFVFESESMKLATDRI 136

Query: 516 WPPEIPLGDVNGKLIRGLKGCEMARFKFRKGCITFYVYAVRRVGSQGFYCAEDLRTILQS 337
           WPPEIPLG+VN KLIRGL G EMARFKFRKGCITFYVYAVRRVG+ GF CA+DLRTILQS
Sbjct: 137 WPPEIPLGEVNKKLIRGLSGAEMARFKFRKGCITFYVYAVRRVGTMGFSCADDLRTILQS 196

Query: 336 VVELKDFMDHTAMLALPSQRSISYS-PPVAMAH 241
           VV L DF+DHTAMLA+P QRSI+Y+  PVAMAH
Sbjct: 197 VVSLNDFLDHTAMLAMPHQRSINYNQAPVAMAH 229


>ref|XP_003518644.1| PREDICTED: uncharacterized protein LOC100780746 [Glycine max]
          Length = 227

 Score =  308 bits (790), Expect = 1e-81
 Identities = 156/211 (73%), Positives = 177/211 (83%), Gaps = 3/211 (1%)
 Frame = -2

Query: 864 PNQQSSETTSNPAFKPSSEVKGLRFGGQFIVKSFTVRRXXXXXXXXXXXLPISNNQNHSK 685
           PN Q+++  S+ +FKPSSEVKG++FGGQFIVKSFT+RR            P +NN N  K
Sbjct: 18  PNDQTTKQNSDFSFKPSSEVKGIKFGGQFIVKSFTIRRARPLELLKVLSFPPTNNTNKPK 77

Query: 684 TKHHPFLSTTAFLPTNFTILAHHAWHTLTLGLGTKKSKVLLFVFESESMKAAVDRIWPPE 505
            K  PF STTAFLPTNFTILAHHAWHTLTLGLGTKKSKV+LFVFE+E+MKA+VDRIWPPE
Sbjct: 78  DKL-PFPSTTAFLPTNFTILAHHAWHTLTLGLGTKKSKVVLFVFETEAMKASVDRIWPPE 136

Query: 504 IPLGDVNGKLIRGLKGCEMARFKFRKGCITFYVYAVRRVGSQGFYCAEDLRTILQSVVEL 325
           I LGDVN +LIRGL GCEMARFKFRKGCITFYVYAVR++GS GF CAEDLRTILQSVVEL
Sbjct: 137 IALGDVNKRLIRGLNGCEMARFKFRKGCITFYVYAVRQLGSFGFSCAEDLRTILQSVVEL 196

Query: 324 KDFMDHTAMLALPSQRSISYS---PPVAMAH 241
           KDF+DHT ML++P+QRSIS+S   P VAMAH
Sbjct: 197 KDFLDHTVMLSMPNQRSISFSQSQPQVAMAH 227


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