BLASTX nr result
ID: Coptis21_contig00011560
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00011560
(1904 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI25886.3| unnamed protein product [Vitis vinifera] 508 e-141
ref|XP_004137207.1| PREDICTED: GTP-binding protein At3g49725, ch... 457 e-129
ref|XP_004156554.1| PREDICTED: LOW QUALITY PROTEIN: GTP-binding ... 448 e-126
tpg|DAA51141.1| TPA: hypothetical protein ZEAMMB73_713960 [Zea m... 444 e-122
ref|NP_001145694.1| uncharacterized protein LOC100279198 [Zea ma... 444 e-122
>emb|CBI25886.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 508 bits (1308), Expect = e-141
Identities = 292/522 (55%), Positives = 356/522 (68%), Gaps = 32/522 (6%)
Frame = -1
Query: 1808 LLRSISQLRTPLNSIPRTL-------------------VTSLNRISIINQLPQLP--THS 1692
+ R+IS L +PL S+P+TL T+ + I Q P + + S
Sbjct: 1 MFRTISFLLSPLRSLPQTLNFITQPSLYLKPYHSPLKLPTNPSSIPPNLQFPPISILSSS 60
Query: 1691 FSSHSLKQKTDEISNPNFIYNKDPEKPPKLFVVQPRLRSDVALKAKLSEALNLANSLEEQ 1512
FS L QK ++ N ++N+DP+ PPKLFVVQPRLR D L+AKL EA+NLANSLEEQ
Sbjct: 61 FSQTPLLQKKEDPYNDASLFNRDPKSPPKLFVVQPRLRPDTLLQAKLDEAINLANSLEEQ 120
Query: 1511 RDGFFVGDISEKERPAHVVVQNPVARS--INSGTYFGSGTVKTIKCHIDAEETKDEFDAV 1338
RDG++ ++ EK P HVVVQNP RS S TYFG GTV T+KCH++A E+K E DAV
Sbjct: 121 RDGYYDTELCEKGLPPHVVVQNPAVRSSKYRSDTYFGPGTVDTVKCHLNAVESKGEIDAV 180
Query: 1337 FVNAILSGVQQRNLEREWGKPILDRVGLIIEIFHAHAQTREAKLQSELAALMYRRTRLIR 1158
+VN ILSG+QQRNLER WGKP+LDRVGLIIEIF+AHAQT+EAKLQ+ELAALMY+RTRL+R
Sbjct: 181 YVNTILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAQTKEAKLQAELAALMYKRTRLVR 240
Query: 1157 LRSLEGKLTFGASGEAEVVXXXXXXXXXXXXXXXXGETXXXXXXXXXXXXXXXXLSQIEE 978
+R +G+ TFGA+GE EVV GET LSQIE
Sbjct: 241 VRGPDGRYTFGATGETEVVSARGRGSGGRGFISGAGETELQLQRRRILERRNHLLSQIEA 300
Query: 977 VXXXXXXXXXXXXXXXXXXXXXLSTVAIVGYTNAGKSTLVNGLSESDLYSDDRLFATVDP 798
V L+TVAIVGYTNAGKSTLV+ LSESDL+SDDRLFATVDP
Sbjct: 301 VRRTRALQRASRKRRGGSNGQGLATVAIVGYTNAGKSTLVSALSESDLFSDDRLFATVDP 360
Query: 797 RVRSVMLPSGRKVLLSDTVGFISDLPVQLVEAFHATLEEVVEADLLVHVIDSSAVDLEEQ 618
R+RSV+LPSGRKVLLSDTVGFISDLPVQLVEAFHATLEEVVEADLLVHV+DSSA DL+EQ
Sbjct: 361 RLRSVILPSGRKVLLSDTVGFISDLPVQLVEAFHATLEEVVEADLLVHVLDSSASDLDEQ 420
Query: 617 RSSVLEVLQQIGVPKEKLQNMIEVWNKIDLRGER--ADDSLSDAEDEYGLTEANNGTESG 444
RS VL+VLQQIGV +EKLQNM+EVWNKIDL+ E AD L + ED+ + ++ +G E
Sbjct: 421 RSVVLQVLQQIGVSEEKLQNMLEVWNKIDLQEEEMGADKYLDNGEDD--VVDSLSGAEDD 478
Query: 443 TLSEEIV-------DEDNLVSELTPGECRENVDEQENDSLDD 339
+ E+ DE+++VSEL+ G+ +E +D+ E D DD
Sbjct: 479 DMPSELPAEPVDDDDENDIVSELSSGDVQETMDDHEGDYSDD 520
>ref|XP_004137207.1| PREDICTED: GTP-binding protein At3g49725, chloroplastic-like [Cucumis
sativus]
Length = 593
Score = 457 bits (1175), Expect(2) = e-129
Identities = 258/458 (56%), Positives = 311/458 (67%), Gaps = 8/458 (1%)
Frame = -1
Query: 1685 SHSLKQKTDEISNPNFIYNKDPEKPPKLFVVQPRLRSDVALKAKLSEALNLANSLEEQRD 1506
SHS K K ++ S+ ++N+D PPKLFVVQPRLR L+AKL+EAL LANSLEEQRD
Sbjct: 53 SHSSKHKKED-SDDLSLFNRDLTAPPKLFVVQPRLRPYTFLQAKLNEALCLANSLEEQRD 111
Query: 1505 GFFVGDISEKERPAHVVVQNPVARSINSGTYFGSGTVKTIKCHIDAEETKDEFDAVFVNA 1326
G+F D +K+ P +VVVQNP R + TYFG GTV TIKCH++A E+K E DA+FVNA
Sbjct: 112 GYFHIDFFDKDVPPYVVVQNPSVRGARADTYFGPGTVDTIKCHLNAAESKSEVDAIFVNA 171
Query: 1325 ILSGVQQRNLEREWGKPILDRVGLIIEIFHAHAQTREAKLQSELAALMYRRTRLIRLRSL 1146
LSG QQRNLE W KP+LDRVGLIIEIF+AHA T+EAKLQ+ELAALMY+++RL+R+R L
Sbjct: 172 TLSGSQQRNLEWAWNKPVLDRVGLIIEIFNAHAYTKEAKLQAELAALMYKKSRLVRVRGL 231
Query: 1145 EGKLTFGASGEAEVVXXXXXXXXXXXXXXXXGETXXXXXXXXXXXXXXXXLSQIEEVXXX 966
+G+ FGA GEAEVV GET SQIEEV
Sbjct: 232 DGRYAFGARGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRNHLYSQIEEVRRT 291
Query: 965 XXXXXXXXXXXXXXXXXXLSTVAIVGYTNAGKSTLVNGLSESDLYSDDRLFATVDPRVRS 786
L+TVA+VGYTNAGKSTLV+ LS++DLYSD RLFATVDPR+RS
Sbjct: 292 RSLQRASRKRHGGSNGQHLATVAVVGYTNAGKSTLVSALSDNDLYSDSRLFATVDPRLRS 351
Query: 785 VMLPSGRKVLLSDTVGFISDLPVQLVEAFHATLEEVVEADLLVHVIDSSAVDLEEQRSSV 606
V LPSGRKV+LSDTVGFISDLPVQLVEAFHATLEEVVEADLLVHV+D +A +L+E RS+V
Sbjct: 352 VFLPSGRKVVLSDTVGFISDLPVQLVEAFHATLEEVVEADLLVHVVDCTAPNLDEHRSTV 411
Query: 605 LEVLQQIGVPKEKLQNMIEVWNKIDL--RGERADDSLSDAEDEYGLT---EANNGTESGT 441
L+VLQQIGV K KLQ+M+EVWNKID GE DDS D E + ++N G S
Sbjct: 412 LQVLQQIGVSKMKLQDMVEVWNKIDYHQEGESIDDSCDDDNGEAANSSGEDSNEGKLSSA 471
Query: 440 LSEEIVD---EDNLVSELTPGECRENVDEQENDSLDDW 336
+ IV+ D + + T ++ QE+D DDW
Sbjct: 472 GTNNIVEMEKGDITIKQATEEHLGNRMEGQESDCCDDW 509
Score = 32.7 bits (73), Expect(2) = e-129
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Frame = -3
Query: 231 QQDSLEDWKAVDDQEN----DSSEGLKTDNNTQGEFSDDNVLDADLLCQDVKPLETSAIM 64
+ D +DW DD++ D +G+ D + S +V SA +
Sbjct: 502 ESDCCDDWLQDDDEDQNPWADKGQGMGEDVQASLDQSGPHV-------------RISARL 548
Query: 63 GIGLQEVLNLIDEKLDKQN 7
G+GL E+L LID KL Q+
Sbjct: 549 GVGLGELLQLIDNKLKVQD 567
>ref|XP_004156554.1| PREDICTED: LOW QUALITY PROTEIN: GTP-binding protein At3g49725,
chloroplastic-like [Cucumis sativus]
Length = 631
Score = 448 bits (1153), Expect(2) = e-126
Identities = 255/458 (55%), Positives = 308/458 (67%), Gaps = 8/458 (1%)
Frame = -1
Query: 1685 SHSLKQKTDEISNPNFIYNKDPEKPPKLFVVQPRLRSDVALKAKLSEALNLANSLEEQRD 1506
SHS K K ++ S+ ++N+D PPKLFVVQPRLR L+AKL+EAL LANSLEEQRD
Sbjct: 53 SHSSKHKKED-SDDLSLFNRDLTAPPKLFVVQPRLRPYTFLQAKLNEALCLANSLEEQRD 111
Query: 1505 GFFVGDISEKERPAHVVVQNPVARSINSGTYFGSGTVKTIKCHIDAEETKDEFDAVFVNA 1326
G+F D +K+ P +VVVQNP R + TYFG GTV TIKCH++A E+K +FVNA
Sbjct: 112 GYFHIDFFDKDVPPYVVVQNPSVRGARADTYFGPGTVDTIKCHLNAAESKVXSRCIFVNA 171
Query: 1325 ILSGVQQRNLEREWGKPILDRVGLIIEIFHAHAQTREAKLQSELAALMYRRTRLIRLRSL 1146
LSG QQRNLE W KP+LDRVGLIIEIF+AHA T+EAKLQ+ELAALMY+++RL+R+R L
Sbjct: 172 TLSGSQQRNLEWAWNKPVLDRVGLIIEIFNAHAYTKEAKLQAELAALMYKKSRLVRVRGL 231
Query: 1145 EGKLTFGASGEAEVVXXXXXXXXXXXXXXXXGETXXXXXXXXXXXXXXXXLSQIEEVXXX 966
+G+ FGA GEAEVV GET SQIEEV
Sbjct: 232 DGRYAFGARGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRNHLYSQIEEVRRT 291
Query: 965 XXXXXXXXXXXXXXXXXXLSTVAIVGYTNAGKSTLVNGLSESDLYSDDRLFATVDPRVRS 786
L+TVA+VGYTNAGKSTLV+ LS++DLYSD RLFATVDPR+RS
Sbjct: 292 RSLQRASRKRHGGSNGQHLATVAVVGYTNAGKSTLVSALSDNDLYSDSRLFATVDPRLRS 351
Query: 785 VMLPSGRKVLLSDTVGFISDLPVQLVEAFHATLEEVVEADLLVHVIDSSAVDLEEQRSSV 606
V LPSGRKV+LSDTVGFISDLPVQLVEAFHATLEEVVEADLLVHV+D +A +L+E RS+V
Sbjct: 352 VFLPSGRKVVLSDTVGFISDLPVQLVEAFHATLEEVVEADLLVHVVDCTAPNLDEHRSTV 411
Query: 605 LEVLQQIGVPKEKLQNMIEVWNKIDL--RGERADDSLSDAEDEYGLT---EANNGTESGT 441
L+VLQQIGV K KLQ+M+EVWNKID GE DDS D E + ++N G S
Sbjct: 412 LQVLQQIGVSKMKLQDMVEVWNKIDYHQEGESIDDSCDDDNGEAANSSGEDSNEGKLSSA 471
Query: 440 LSEEIVD---EDNLVSELTPGECRENVDEQENDSLDDW 336
+ IV+ D + + T ++ QE+D DDW
Sbjct: 472 GTNNIVEMEKGDITIKQATEEHLGNRMEGQESDCCDDW 509
Score = 32.7 bits (73), Expect(2) = e-126
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Frame = -3
Query: 231 QQDSLEDWKAVDDQEN----DSSEGLKTDNNTQGEFSDDNVLDADLLCQDVKPLETSAIM 64
+ D +DW DD++ D +G+ D + S +V SA +
Sbjct: 502 ESDCCDDWLQDDDEDQNPWADKGQGMGEDVQASLDQSGPHV-------------RISARL 548
Query: 63 GIGLQEVLNLIDEKLDKQN 7
G+GL E+L LID KL Q+
Sbjct: 549 GVGLGELLQLIDNKLKVQD 567
>tpg|DAA51141.1| TPA: hypothetical protein ZEAMMB73_713960 [Zea mays]
gi|414872585|tpg|DAA51142.1| TPA: hypothetical protein
ZEAMMB73_713960 [Zea mays]
Length = 588
Score = 444 bits (1142), Expect = e-122
Identities = 249/435 (57%), Positives = 303/435 (69%), Gaps = 1/435 (0%)
Frame = -1
Query: 1640 FIYNKDPEKPPKLFVVQPRLRSDVALKAKLSEALNLANSLEEQRDGFFVGDISEKERPAH 1461
F+ ++DPE PP+L VVQPRLR L++KL+EALNLANSLEE+RDGF+ + K P H
Sbjct: 56 FVLSRDPECPPRLLVVQPRLRPGSLLESKLAEALNLANSLEERRDGFYHSEFGAKGAPPH 115
Query: 1460 VVVQNPVARS-INSGTYFGSGTVKTIKCHIDAEETKDEFDAVFVNAILSGVQQRNLEREW 1284
+VVQNP +R ++ TYFG GTV +KC++ A E++++ DAVFVNAILSG+QQRNLE W
Sbjct: 116 LVVQNPASRGRSHADTYFGPGTVDNVKCYLSATESEEDVDAVFVNAILSGIQQRNLEVAW 175
Query: 1283 GKPILDRVGLIIEIFHAHAQTREAKLQSELAALMYRRTRLIRLRSLEGKLTFGASGEAEV 1104
GK +LDRVGLIIEIF+AHA+T+EAKLQSELAALMY +TRL+R+R G+LTFG SGEAEV
Sbjct: 176 GKSVLDRVGLIIEIFNAHAETKEAKLQSELAALMYMKTRLVRVRGPGGRLTFGPSGEAEV 235
Query: 1103 VXXXXXXXXXXXXXXXXGETXXXXXXXXXXXXXXXXLSQIEEVXXXXXXXXXXXXXXXXX 924
V GET L+QIE+V
Sbjct: 236 VSARGRGSGGRGFMSGAGETELQLQRRRIQERRVSLLAQIEDVRRTRAIQRSSRKRHGGS 295
Query: 923 XXXXLSTVAIVGYTNAGKSTLVNGLSESDLYSDDRLFATVDPRVRSVMLPSGRKVLLSDT 744
L TVA+VGYTNAGKSTLV+ LSE+DLYSDDRLFATVDPR+RSV+LPSGRK LLSDT
Sbjct: 296 FGQELVTVAVVGYTNAGKSTLVSALSEADLYSDDRLFATVDPRLRSVILPSGRKALLSDT 355
Query: 743 VGFISDLPVQLVEAFHATLEEVVEADLLVHVIDSSAVDLEEQRSSVLEVLQQIGVPKEKL 564
VGFISDLPVQLVEAFHATLEEVVEAD+LVHV+DSSA +LEE RS+VL+VLQQIGV +EK+
Sbjct: 356 VGFISDLPVQLVEAFHATLEEVVEADMLVHVLDSSASNLEEHRSTVLQVLQQIGVSQEKI 415
Query: 563 QNMIEVWNKIDLRGERADDSLSDAEDEYGLTEANNGTESGTLSEEIVDEDNLVSELTPGE 384
NMIEVWNKIDL E +DE LTE G ++I ED+ SE T +
Sbjct: 416 NNMIEVWNKIDLVDENVKS--DGIDDEVFLTE-------GEQEDDIFSEDDAPSEQTSFD 466
Query: 383 CRENVDEQENDSLDD 339
+ D +++ L +
Sbjct: 467 SVDVDDGADSEYLSE 481
>ref|NP_001145694.1| uncharacterized protein LOC100279198 [Zea mays]
gi|219884045|gb|ACL52397.1| unknown [Zea mays]
Length = 588
Score = 444 bits (1142), Expect = e-122
Identities = 249/435 (57%), Positives = 303/435 (69%), Gaps = 1/435 (0%)
Frame = -1
Query: 1640 FIYNKDPEKPPKLFVVQPRLRSDVALKAKLSEALNLANSLEEQRDGFFVGDISEKERPAH 1461
F+ ++DPE PP+L VVQPRLR L++KL+EALNLANSLEE+RDGF+ + K P H
Sbjct: 56 FVLSRDPECPPRLLVVQPRLRPGSLLESKLAEALNLANSLEERRDGFYHSEFGAKGAPPH 115
Query: 1460 VVVQNPVARS-INSGTYFGSGTVKTIKCHIDAEETKDEFDAVFVNAILSGVQQRNLEREW 1284
+VVQNP +R ++ TYFG GTV +KC++ A E++++ DAVFVNAILSG+QQRNLE W
Sbjct: 116 LVVQNPASRGRSHADTYFGPGTVDNVKCYLSATESEEDVDAVFVNAILSGIQQRNLEVAW 175
Query: 1283 GKPILDRVGLIIEIFHAHAQTREAKLQSELAALMYRRTRLIRLRSLEGKLTFGASGEAEV 1104
GK +LDRVGLIIEIF+AHA+T+EAKLQSELAALMY +TRL+R+R G+LTFG SGEAEV
Sbjct: 176 GKSVLDRVGLIIEIFNAHAETKEAKLQSELAALMYMKTRLVRVRGPGGRLTFGPSGEAEV 235
Query: 1103 VXXXXXXXXXXXXXXXXGETXXXXXXXXXXXXXXXXLSQIEEVXXXXXXXXXXXXXXXXX 924
V GET L+QIE+V
Sbjct: 236 VSARGRGSGGRGFMSGAGETELQLQRRRIQERRVSLLAQIEDVRRTRAIQRSSRKRHGGS 295
Query: 923 XXXXLSTVAIVGYTNAGKSTLVNGLSESDLYSDDRLFATVDPRVRSVMLPSGRKVLLSDT 744
L TVA+VGYTNAGKSTLV+ LSE+DLYSDDRLFATVDPR+RSV+LPSGRK LLSDT
Sbjct: 296 FGQELVTVAVVGYTNAGKSTLVSALSEADLYSDDRLFATVDPRLRSVILPSGRKALLSDT 355
Query: 743 VGFISDLPVQLVEAFHATLEEVVEADLLVHVIDSSAVDLEEQRSSVLEVLQQIGVPKEKL 564
VGFISDLPVQLVEAFHATLEEVVEAD+LVHV+DSSA +LEE RS+VL+VLQQIGV +EK+
Sbjct: 356 VGFISDLPVQLVEAFHATLEEVVEADMLVHVLDSSASNLEEHRSTVLQVLQQIGVSQEKI 415
Query: 563 QNMIEVWNKIDLRGERADDSLSDAEDEYGLTEANNGTESGTLSEEIVDEDNLVSELTPGE 384
NMIEVWNKIDL E +DE LTE G ++I ED+ SE T +
Sbjct: 416 NNMIEVWNKIDLVDENVKS--DGIDDEVFLTE-------GEQEDDIFSEDDAPSEQTSFD 466
Query: 383 CRENVDEQENDSLDD 339
+ D +++ L +
Sbjct: 467 SVDVDDGADSEYLSE 481