BLASTX nr result

ID: Coptis21_contig00011556 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011556
         (1927 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004133912.1| PREDICTED: transducin beta-like protein 2-li...   654   0.0  
ref|XP_002279016.1| PREDICTED: transducin beta-like protein 2 [V...   644   0.0  
ref|XP_002511720.1| nucleotide binding protein, putative [Ricinu...   639   e-180
ref|XP_002301292.1| predicted protein [Populus trichocarpa] gi|2...   635   e-179
ref|XP_003552339.1| PREDICTED: uncharacterized protein LOC100306...   622   e-175

>ref|XP_004133912.1| PREDICTED: transducin beta-like protein 2-like [Cucumis sativus]
            gi|449528295|ref|XP_004171140.1| PREDICTED: transducin
            beta-like protein 2-like [Cucumis sativus]
          Length = 434

 Score =  654 bits (1688), Expect = 0.0
 Identities = 316/426 (74%), Positives = 372/426 (87%)
 Frame = +1

Query: 76   VISILLGSVIALLFFSDYFRKKKSQVESIVKPDTGNAAVQKSKKGSQFNSKKTHLKPHSH 255
            V+S++LG++IA++FF  YFRK++S+V++I  P+  +   +K +K SQ  +KK+H KPHSH
Sbjct: 9    VVSVILGALIAVIFFGSYFRKRRSEVQTISHPELPSDP-KKHQKPSQ--TKKSHSKPHSH 65

Query: 256  GSDKDQVKRHHPLDVNTLKGHGDSVTALSFSSDARNLATACADGVVRVFKLDDASSKSFK 435
             S+KDQ K+HHPLD+NTLKGHGDSVT L FSSD  NLATACADGV+RVFKLDDASSKSFK
Sbjct: 66   SSEKDQNKKHHPLDLNTLKGHGDSVTGLCFSSDGSNLATACADGVIRVFKLDDASSKSFK 125

Query: 436  FLRINLPAGSHPTAISFSDEKTSLVVAAHGLSGSSLYMYGEGNAKTDNEPKEQSKLPLPE 615
            FLRINLPAG HPTA+ F D+ TS++V++ GLSGSSLYMYGE  AK   E K+Q+KLPLPE
Sbjct: 126  FLRINLPAGGHPTAVMFGDDATSIIVSSQGLSGSSLYMYGEEKAKPSGETKQQAKLPLPE 185

Query: 616  IKWEQHKVHDKRAILNLVGTTASYGTADGSTIIASCSEGTDIILLHGKSGKILGNVDTNQ 795
            IKWEQHKVHDK++++ LVG TASYG+ADGSTI+ASCSEGTDI L H K+GK++G+VDTNQ
Sbjct: 186  IKWEQHKVHDKKSVITLVGATASYGSADGSTIVASCSEGTDIRLWHAKTGKLVGDVDTNQ 245

Query: 796  LKNHMATVSRNGRFLAAAAFTADVKVWEIVYSKDGSVKEVTKAMQLKGHKSAVTWLCFTP 975
            LKN MAT+S NGRF+AAAAFTADVKVWE+VYSKDGSVKEV + MQLKGHKSAVTWLCFTP
Sbjct: 246  LKNTMATLSPNGRFIAAAAFTADVKVWEVVYSKDGSVKEVLRVMQLKGHKSAVTWLCFTP 305

Query: 976  SSEQIITASKDGSIRIWNINVRYQLDEDPKTLKVFPIPLCDSKGSPMHYDRLSISPDGKV 1155
            +SEQIITASKDGS+RIWNINVRY LDEDPKTLKVFPIPL DSKG+ +HYD L+ISPDGK+
Sbjct: 306  NSEQIITASKDGSMRIWNINVRYHLDEDPKTLKVFPIPLHDSKGATVHYDHLNISPDGKI 365

Query: 1156 LAATHGSTLQWLCAETGKVLDTADKAHEGEITGIAWASRSIPLGGALAMVLATSSVDKKV 1335
            LAATHGSTLQWLC ETGKVLDTA+KAH+G+IT I+WA + IP G    MVLAT+SVDKKV
Sbjct: 366  LAATHGSTLQWLCVETGKVLDTAEKAHDGDITWISWAPKPIPSGVKKVMVLATASVDKKV 425

Query: 1336 KLWVAP 1353
            KLW AP
Sbjct: 426  KLWAAP 431


>ref|XP_002279016.1| PREDICTED: transducin beta-like protein 2 [Vitis vinifera]
          Length = 439

 Score =  644 bits (1662), Expect = 0.0
 Identities = 319/426 (74%), Positives = 363/426 (85%)
 Frame = +1

Query: 76   VISILLGSVIALLFFSDYFRKKKSQVESIVKPDTGNAAVQKSKKGSQFNSKKTHLKPHSH 255
            V+SILLG++IAL+F  +YF K++S+VESI KP+  +    K  K  Q  SKK+  K HSH
Sbjct: 9    VVSILLGALIALVFLGNYFLKRRSEVESIFKPELQSDKNPKPAKPPQSFSKKSQFKHHSH 68

Query: 256  GSDKDQVKRHHPLDVNTLKGHGDSVTALSFSSDARNLATACADGVVRVFKLDDASSKSFK 435
             +DKDQ KRHHPLD+NTLKGHGDSV  L FS D RNLATACADGVVRV+KLDDASSKSFK
Sbjct: 69   AADKDQNKRHHPLDINTLKGHGDSVNGLCFSPDGRNLATACADGVVRVYKLDDASSKSFK 128

Query: 436  FLRINLPAGSHPTAISFSDEKTSLVVAAHGLSGSSLYMYGEGNAKTDNEPKEQSKLPLPE 615
            FLRIN+P G HPTA++F D+ +S+VVA+  LSG SL+M+G+  AKT NE K+ +K P+PE
Sbjct: 129  FLRINVPLGGHPTAVTFGDDSSSVVVASQTLSGCSLFMFGDERAKTANETKQPAKPPVPE 188

Query: 616  IKWEQHKVHDKRAILNLVGTTASYGTADGSTIIASCSEGTDIILLHGKSGKILGNVDTNQ 795
            IKWE+ KVHDKRAIL L GTTASYG+ADGSTII SCSEGTDI+L HGK+GK LG+VDTNQ
Sbjct: 189  IKWERLKVHDKRAILTLFGTTASYGSADGSTIIVSCSEGTDIMLWHGKTGKNLGHVDTNQ 248

Query: 796  LKNHMATVSRNGRFLAAAAFTADVKVWEIVYSKDGSVKEVTKAMQLKGHKSAVTWLCFTP 975
            LKN+MA VS NGRF+AAAAFTADVKVWEIVYSKDGSVKEV+  MQLKGHKSAVTWLCFTP
Sbjct: 249  LKNNMAAVSPNGRFIAAAAFTADVKVWEIVYSKDGSVKEVSNVMQLKGHKSAVTWLCFTP 308

Query: 976  SSEQIITASKDGSIRIWNINVRYQLDEDPKTLKVFPIPLCDSKGSPMHYDRLSISPDGKV 1155
            +SEQIITASKDGSIR WNINVRY LDEDPKTLKVFPIPL DS GS + YDRLSISPDGK+
Sbjct: 309  NSEQIITASKDGSIRTWNINVRYHLDEDPKTLKVFPIPLHDSSGSTLLYDRLSISPDGKI 368

Query: 1156 LAATHGSTLQWLCAETGKVLDTADKAHEGEITGIAWASRSIPLGGALAMVLATSSVDKKV 1335
            LAATHGSTLQWLC ETGKVLDTADKAH+G+IT IAWA   +P+G   ++VLATSSVDKKV
Sbjct: 369  LAATHGSTLQWLCTETGKVLDTADKAHDGDITCIAWAPEHLPIGDQKSLVLATSSVDKKV 428

Query: 1336 KLWVAP 1353
            KLWVAP
Sbjct: 429  KLWVAP 434


>ref|XP_002511720.1| nucleotide binding protein, putative [Ricinus communis]
            gi|223548900|gb|EEF50389.1| nucleotide binding protein,
            putative [Ricinus communis]
          Length = 438

 Score =  639 bits (1647), Expect = e-180
 Identities = 310/430 (72%), Positives = 368/430 (85%)
 Frame = +1

Query: 70   VLVISILLGSVIALLFFSDYFRKKKSQVESIVKPDTGNAAVQKSKKGSQFNSKKTHLKPH 249
            + ++SILLG++IA+LFF  YF K+KS+++SI  P+   +  +K  K SQ  +KK+H KPH
Sbjct: 7    IAIVSILLGALIAILFFKSYFLKRKSEIKSIAPPEL-RSDPKKPTKHSQPVTKKSHSKPH 65

Query: 250  SHGSDKDQVKRHHPLDVNTLKGHGDSVTALSFSSDARNLATACADGVVRVFKLDDASSKS 429
            SH +DK+Q +RHHPLD+NTLKGHGD+VT L FS+D R+LATACADGVVRVFKLDDASS+S
Sbjct: 66   SHAADKEQNRRHHPLDLNTLKGHGDAVTGLCFSNDGRSLATACADGVVRVFKLDDASSRS 125

Query: 430  FKFLRINLPAGSHPTAISFSDEKTSLVVAAHGLSGSSLYMYGEGNAKTDNEPKEQSKLPL 609
            FKFLRINLPAG  P A++FSD+ +S+VVA+  LSG+SLY+YGE N K  N+ K+Q KLPL
Sbjct: 126  FKFLRINLPAGGIPVAVTFSDDASSVVVASQTLSGASLYLYGEENPKPSNDSKQQPKLPL 185

Query: 610  PEIKWEQHKVHDKRAILNLVGTTASYGTADGSTIIASCSEGTDIILLHGKSGKILGNVDT 789
            PEIKWE  K+H+ +A++ LVGT A+YG+ADGS+I+ASCSEGTDI L HGK+G ILGNVDT
Sbjct: 186  PEIKWEHRKIHENKAVITLVGTVATYGSADGSSIVASCSEGTDIKLWHGKTGNILGNVDT 245

Query: 790  NQLKNHMATVSRNGRFLAAAAFTADVKVWEIVYSKDGSVKEVTKAMQLKGHKSAVTWLCF 969
            NQLKN MA +S NGRF+AAAAFTADVKVWEI+YSKDGSVKEV K MQLKGHKSAVTWLCF
Sbjct: 246  NQLKNTMAAISPNGRFVAAAAFTADVKVWEIIYSKDGSVKEVPKVMQLKGHKSAVTWLCF 305

Query: 970  TPSSEQIITASKDGSIRIWNINVRYQLDEDPKTLKVFPIPLCDSKGSPMHYDRLSISPDG 1149
            T +SEQIITASKDGSIRIWNINVRY LDEDPKTLKVFPIPL DS  + +HYDRLS+SPDG
Sbjct: 306  TSNSEQIITASKDGSIRIWNINVRYHLDEDPKTLKVFPIPLHDSHDATLHYDRLSLSPDG 365

Query: 1150 KVLAATHGSTLQWLCAETGKVLDTADKAHEGEITGIAWASRSIPLGGALAMVLATSSVDK 1329
            K+LAAT+GSTLQWLC ETGKVLDTADKAH+G+IT IAWA ++IP G   AMVLAT+SVDK
Sbjct: 366  KILAATNGSTLQWLCVETGKVLDTADKAHDGQITWIAWAPKTIPNGDGQAMVLATASVDK 425

Query: 1330 KVKLWVAPVI 1359
            KVKLW AP +
Sbjct: 426  KVKLWAAPSV 435


>ref|XP_002301292.1| predicted protein [Populus trichocarpa] gi|222843018|gb|EEE80565.1|
            predicted protein [Populus trichocarpa]
          Length = 438

 Score =  635 bits (1638), Expect = e-179
 Identities = 310/429 (72%), Positives = 362/429 (84%), Gaps = 1/429 (0%)
 Frame = +1

Query: 70   VLVISILLGSVIALLFFSDYFRKKKSQVESIVKPDTGNAAVQKSKKGSQFNSKKTHLKPH 249
            + +IS+LLG+ IAL+FF +YF K+KS++ SI +P       +K  K +   S+K H KPH
Sbjct: 7    IALISLLLGTAIALIFFKNYFLKRKSEIGSISEPGLHPDLHKKPPKPTH-QSRKPHSKPH 65

Query: 250  SHGS-DKDQVKRHHPLDVNTLKGHGDSVTALSFSSDARNLATACADGVVRVFKLDDASSK 426
            SH S DKD  K+HHPLD+NTLKGHGDSV+ L FS D R+LATACADGVVRVFKLDDASSK
Sbjct: 66   SHASSDKDHNKKHHPLDLNTLKGHGDSVSGLCFSYDGRSLATACADGVVRVFKLDDASSK 125

Query: 427  SFKFLRINLPAGSHPTAISFSDEKTSLVVAAHGLSGSSLYMYGEGNAKTDNEPKEQSKLP 606
            SFKFLRIN+PAG HP A++FSD+ +S+VVA+  LSGSSLYM+GE   K  ++ K+Q KLP
Sbjct: 126  SFKFLRINVPAGGHPVAVAFSDDASSVVVASQTLSGSSLYMWGEEKVKATDDSKQQPKLP 185

Query: 607  LPEIKWEQHKVHDKRAILNLVGTTASYGTADGSTIIASCSEGTDIILLHGKSGKILGNVD 786
            LP+IKWE HK+H+KRA+L LVGT ++YG+ DGSTI+ASCSEGTDI + HGK+GK+LGNVD
Sbjct: 186  LPDIKWEHHKIHEKRAVLTLVGTASTYGSGDGSTIVASCSEGTDIKIWHGKTGKVLGNVD 245

Query: 787  TNQLKNHMATVSRNGRFLAAAAFTADVKVWEIVYSKDGSVKEVTKAMQLKGHKSAVTWLC 966
            TNQLKN+MAT+S NGRF+AAAAFTADVKVWEIVYSKDGSVKEV KAMQLKGHKSAVTWLC
Sbjct: 246  TNQLKNNMATISPNGRFIAAAAFTADVKVWEIVYSKDGSVKEVPKAMQLKGHKSAVTWLC 305

Query: 967  FTPSSEQIITASKDGSIRIWNINVRYQLDEDPKTLKVFPIPLCDSKGSPMHYDRLSISPD 1146
            FTP SEQIITASKDGSIRIWNINVRY LDEDPKTLKVFPIPL DS G+ +HYDRLS+SPD
Sbjct: 306  FTPDSEQIITASKDGSIRIWNINVRYHLDEDPKTLKVFPIPLHDSNGATLHYDRLSLSPD 365

Query: 1147 GKVLAATHGSTLQWLCAETGKVLDTADKAHEGEITGIAWASRSIPLGGALAMVLATSSVD 1326
            G++LAATHGS LQWLC ETGKVLDTAD AH G+IT IAWA + +P G   + VLAT+SVD
Sbjct: 366  GRILAATHGSMLQWLCVETGKVLDTADNAHNGDITWIAWAPKPMPAGDGRSFVLATASVD 425

Query: 1327 KKVKLWVAP 1353
            KKVKLW AP
Sbjct: 426  KKVKLWAAP 434


>ref|XP_003552339.1| PREDICTED: uncharacterized protein LOC100306508 [Glycine max]
          Length = 429

 Score =  622 bits (1603), Expect = e-175
 Identities = 305/433 (70%), Positives = 363/433 (83%)
 Frame = +1

Query: 70   VLVISILLGSVIALLFFSDYFRKKKSQVESIVKPDTGNAAVQKSKKGSQFNSKKTHLKPH 249
            ++ +S+LLG++IA LFFS Y+RK++S+++SI  P+            S+   KK   KPH
Sbjct: 7    IVALSLLLGAIIAFLFFSTYYRKRQSEIQSIADPNP-------KPLSSKAPPKKPLSKPH 59

Query: 250  SHGSDKDQVKRHHPLDVNTLKGHGDSVTALSFSSDARNLATACADGVVRVFKLDDASSKS 429
            S  SDKDQ KRHHPLD+NTLKGHGD+VT + FS D RNLATACADGVVRVFKLDDASSKS
Sbjct: 60   S--SDKDQNKRHHPLDLNTLKGHGDAVTGICFSPDGRNLATACADGVVRVFKLDDASSKS 117

Query: 430  FKFLRINLPAGSHPTAISFSDEKTSLVVAAHGLSGSSLYMYGEGNAKTDNEPKEQSKLPL 609
            FKFLRINLPAG HPTA++FSD+ +S+VVA++ LSG SLYMYGE   KT +E K Q+KLPL
Sbjct: 118  FKFLRINLPAGGHPTAVAFSDDASSIVVASYTLSGCSLYMYGEEKPKT-SEDKPQTKLPL 176

Query: 610  PEIKWEQHKVHDKRAILNLVGTTASYGTADGSTIIASCSEGTDIILLHGKSGKILGNVDT 789
            PEIKWE HKVHDK++I+ + G +A+YGTADGSTI+ASCSEGTDIIL HGK+GK +G+VDT
Sbjct: 177  PEIKWEHHKVHDKKSIITMFGASATYGTADGSTIVASCSEGTDIILWHGKTGKSVGHVDT 236

Query: 790  NQLKNHMATVSRNGRFLAAAAFTADVKVWEIVYSKDGSVKEVTKAMQLKGHKSAVTWLCF 969
            NQLKN+MAT+S NGRF+AAAAFTADVK+WEIVY+KDGSVKEV   MQLKGHKSAVTWLCF
Sbjct: 237  NQLKNNMATISPNGRFIAAAAFTADVKIWEIVYAKDGSVKEVLNVMQLKGHKSAVTWLCF 296

Query: 970  TPSSEQIITASKDGSIRIWNINVRYQLDEDPKTLKVFPIPLCDSKGSPMHYDRLSISPDG 1149
             P+SEQIITASKDGS+R+WNINVRY LDEDPKTLKVF IPL DS G+ +HYDRLS+SPDG
Sbjct: 297  MPNSEQIITASKDGSMRLWNINVRYHLDEDPKTLKVFLIPLHDSSGTTLHYDRLSVSPDG 356

Query: 1150 KVLAATHGSTLQWLCAETGKVLDTADKAHEGEITGIAWASRSIPLGGALAMVLATSSVDK 1329
            K+LAATHGSTLQWLC ETGKVLDTA+KAH+ +I+ I+WA + IP+G    +VLAT+S DK
Sbjct: 357  KILAATHGSTLQWLCVETGKVLDTAEKAHDSDISCISWAPKPIPMGNEQVLVLATASADK 416

Query: 1330 KVKLWVAPVIHPS 1368
            KVKLW +P I  S
Sbjct: 417  KVKLWASPSIPSS 429


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