BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011547
         (682 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299908.1| predicted protein [Populus trichocarpa] gi|2...   335   4e-90
ref|XP_003532209.1| PREDICTED: heterogeneous nuclear ribonucleop...   331   9e-89
ref|XP_002513501.1| heterogeneous nuclear ribonucleoprotein, put...   331   9e-89
ref|NP_001239939.1| uncharacterized protein LOC100805177 [Glycin...   327   1e-87
ref|XP_003600475.1| Heterogeneous nuclear ribonucleoprotein F [M...   326   3e-87

>ref|XP_002299908.1| predicted protein [Populus trichocarpa] gi|222847166|gb|EEE84713.1|
           predicted protein [Populus trichocarpa]
          Length = 253

 Score =  335 bits (860), Expect = 4e-90
 Identities = 162/217 (74%), Positives = 189/217 (87%), Gaps = 1/217 (0%)
 Frame = +1

Query: 4   PSYAYSGQPPPPFPVVRLRGLPFDCAEPDIVEFFRGLDIVDILLVNKDGRFSGEAFCVLG 183
           P Y Y  QPPPPFPVVRLRGLPFDC E D+ EFFRGLDIVD+L V+K G+F+GEAFCVLG
Sbjct: 39  PPYGYVSQPPPPFPVVRLRGLPFDCTETDVAEFFRGLDIVDVLFVHKGGKFTGEAFCVLG 98

Query: 184 YPLQVDFALQRNRQSMGRRYIEVFRTKRQEYYRAIADEVSEGQPHSPPHRKARRAKSSDD 363
           YPLQVDFALQ+NRQ+MGRRY+EVFR+KRQ+YY+AIA+EVSE +    P R   RAKS D+
Sbjct: 99  YPLQVDFALQKNRQNMGRRYVEVFRSKRQDYYKAIANEVSESR--GSPRRNISRAKSYDE 156

Query: 364 NKDSAEHTGILRLRGLPYSAGKDDLIDFFKDFEISEDGVHIVMNSDGRPSGEAYVEFASA 543
            KD AEHTG+LRLRGLP+SAGKDD+++FFKDF +SED +HI MNS+GRP+GEA+VEFA+A
Sbjct: 157 GKDLAEHTGVLRLRGLPFSAGKDDIMEFFKDFVLSEDLIHITMNSEGRPTGEAFVEFANA 216

Query: 544 EDSKAAMVKDRKTLGSRYIELFPSNQEDLDEAV-RGR 651
           EDSKAAM KDR TLGSRYIELFPS+ E+LDEAV RGR
Sbjct: 217 EDSKAAMAKDRMTLGSRYIELFPSSIEELDEAVSRGR 253


>ref|XP_003532209.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Glycine
           max]
          Length = 260

 Score =  331 bits (848), Expect = 9e-89
 Identities = 161/219 (73%), Positives = 188/219 (85%), Gaps = 2/219 (0%)
 Frame = +1

Query: 1   PPSYAYSGQPPPP-FPVVRLRGLPFDCAEPDIVEFFRGLDIVDILLVNKDGRFSGEAFCV 177
           P  Y Y  QPPPP FPVVRLRGLPFDC E D+ EFF GLDIVD+L V+K G+F+GE FCV
Sbjct: 43  PSPYGYVSQPPPPPFPVVRLRGLPFDCTETDVAEFFHGLDIVDVLFVHKGGKFTGEGFCV 102

Query: 178 LGYPLQVDFALQRNRQSMGRRYIEVFRTKRQEYYRAIADEVSEGQPHSPPHRKARRAKSS 357
           LGYPLQVDFALQRNRQ+MGRRY+EVFR+KRQEYY+AIA+EVS+ +  S P R A RAKS 
Sbjct: 103 LGYPLQVDFALQRNRQNMGRRYVEVFRSKRQEYYKAIANEVSDARGGS-PRRSASRAKSY 161

Query: 358 DDNKDSAEHTGILRLRGLPYSAGKDDLIDFFKDFEISEDGVHIVMNSDGRPSGEAYVEFA 537
           D+ KDSAEHTG+LRLRGLP+SA KDD+++FFKDF + ED +HI+MNS+GRPSGEAY EFA
Sbjct: 162 DEGKDSAEHTGVLRLRGLPFSASKDDIMEFFKDFGLPEDSIHIIMNSEGRPSGEAYAEFA 221

Query: 538 SAEDSKAAMVKDRKTLGSRYIELFPSNQEDLDEAV-RGR 651
           SAEDSKAAMVKDR TLGSRYIELFPS+  +++EA+ RGR
Sbjct: 222 SAEDSKAAMVKDRMTLGSRYIELFPSSPGEMEEAISRGR 260


>ref|XP_002513501.1| heterogeneous nuclear ribonucleoprotein, putative [Ricinus
           communis] gi|223547409|gb|EEF48904.1| heterogeneous
           nuclear ribonucleoprotein, putative [Ricinus communis]
          Length = 260

 Score =  331 bits (848), Expect = 9e-89
 Identities = 163/218 (74%), Positives = 191/218 (87%), Gaps = 1/218 (0%)
 Frame = +1

Query: 1   PPSYAYSGQPPPPFPVVRLRGLPFDCAEPDIVEFFRGLDIVDILLVNKDGRFSGEAFCVL 180
           PP Y Y  QPPP FPVVRLRGLPFDC E D+ EFF GLDIVD+L V+K G+F+GEAFCVL
Sbjct: 46  PPPYGYVAQPPP-FPVVRLRGLPFDCTETDVAEFFHGLDIVDVLFVHKGGKFTGEAFCVL 104

Query: 181 GYPLQVDFALQRNRQSMGRRYIEVFRTKRQEYYRAIADEVSEGQPHSPPHRKARRAKSSD 360
           G PLQVDFALQ+NRQ+MGRRY+EVFR+KRQ+YY+AIA+EVS+ +  SP  R+A RAKS D
Sbjct: 105 GCPLQVDFALQKNRQNMGRRYVEVFRSKRQDYYKAIANEVSDARGGSP--RRAPRAKSYD 162

Query: 361 DNKDSAEHTGILRLRGLPYSAGKDDLIDFFKDFEISEDGVHIVMNSDGRPSGEAYVEFAS 540
           + KDSAEHTG+LRLRGLP+SAGKDD+++FFKDF +SED VHI MNS+GRP+GEA+VEFAS
Sbjct: 163 EGKDSAEHTGVLRLRGLPFSAGKDDIMEFFKDFVLSEDSVHITMNSEGRPTGEAFVEFAS 222

Query: 541 AEDSKAAMVKDRKTLGSRYIELFPSNQEDLDEAV-RGR 651
           AEDSKAAM KDR TLGSRYIELFPS+ E+L+EAV RGR
Sbjct: 223 AEDSKAAMAKDRMTLGSRYIELFPSSIEELEEAVTRGR 260


>ref|NP_001239939.1| uncharacterized protein LOC100805177 [Glycine max]
           gi|255644706|gb|ACU22855.1| unknown [Glycine max]
          Length = 261

 Score =  327 bits (838), Expect = 1e-87
 Identities = 158/220 (71%), Positives = 187/220 (85%), Gaps = 3/220 (1%)
 Frame = +1

Query: 1   PPSYAYSGQPPPP--FPVVRLRGLPFDCAEPDIVEFFRGLDIVDILLVNKDGRFSGEAFC 174
           P  Y Y  QPPPP  FPVVRLRGLPFDC E D+ EFF GLDIVD+L V+K G+F+GE FC
Sbjct: 43  PSPYGYVSQPPPPPPFPVVRLRGLPFDCTETDVAEFFHGLDIVDVLFVHKGGKFTGEGFC 102

Query: 175 VLGYPLQVDFALQRNRQSMGRRYIEVFRTKRQEYYRAIADEVSEGQPHSPPHRKARRAKS 354
           VLGYPLQVDFALQRNRQ+MGRRY+EVFR+KRQEYY+AIA+EVS+ +  S P R A RAKS
Sbjct: 103 VLGYPLQVDFALQRNRQNMGRRYVEVFRSKRQEYYKAIANEVSDARGGS-PRRSASRAKS 161

Query: 355 SDDNKDSAEHTGILRLRGLPYSAGKDDLIDFFKDFEISEDGVHIVMNSDGRPSGEAYVEF 534
            D+ K+SAEHTG+LRLRGLP+SA KDD+++FFKDF + ED +HI+MNS+GRPSGEAY EF
Sbjct: 162 YDEGKESAEHTGVLRLRGLPFSASKDDIMEFFKDFGLPEDSIHIIMNSEGRPSGEAYAEF 221

Query: 535 ASAEDSKAAMVKDRKTLGSRYIELFPSNQEDLDEAV-RGR 651
            SAEDSKAAM+KDR TLGSRYIELFPS+  +++EA+ RGR
Sbjct: 222 ESAEDSKAAMIKDRMTLGSRYIELFPSSHGEMEEAISRGR 261


>ref|XP_003600475.1| Heterogeneous nuclear ribonucleoprotein F [Medicago truncatula]
           gi|355489523|gb|AES70726.1| Heterogeneous nuclear
           ribonucleoprotein F [Medicago truncatula]
          Length = 259

 Score =  326 bits (835), Expect = 3e-87
 Identities = 158/219 (72%), Positives = 187/219 (85%), Gaps = 2/219 (0%)
 Frame = +1

Query: 1   PPSYAYSGQPPPP-FPVVRLRGLPFDCAEPDIVEFFRGLDIVDILLVNKDGRFSGEAFCV 177
           P  Y Y  QPPPP FPVVRLRGLPFDC E D+ EFF GLDIVD+L V+K G+FSGE FCV
Sbjct: 42  PSPYGYVSQPPPPPFPVVRLRGLPFDCTETDVAEFFHGLDIVDVLFVHKGGKFSGEGFCV 101

Query: 178 LGYPLQVDFALQRNRQSMGRRYIEVFRTKRQEYYRAIADEVSEGQPHSPPHRKARRAKSS 357
           LGYPLQVDFALQRNRQ++GRRY+EVFR+KRQEYY+AIA+EVS+ +  S P R A RAKS 
Sbjct: 102 LGYPLQVDFALQRNRQNIGRRYVEVFRSKRQEYYKAIANEVSDARGGS-PRRSAPRAKSY 160

Query: 358 DDNKDSAEHTGILRLRGLPYSAGKDDLIDFFKDFEISEDGVHIVMNSDGRPSGEAYVEFA 537
           D+ KDSAEHTG+LRLRGLP+SA KDD++DFFK++ +SED +HIVMNS+GRPSGEAYVEF 
Sbjct: 161 DEGKDSAEHTGVLRLRGLPFSANKDDIMDFFKEYVLSEDSIHIVMNSEGRPSGEAYVEFE 220

Query: 538 SAEDSKAAMVKDRKTLGSRYIELFPSNQEDLDEAV-RGR 651
           +A+DSKAAM KDR TLGSRYIELFPS   ++++A+ RGR
Sbjct: 221 NADDSKAAMAKDRMTLGSRYIELFPSTHGEMEDAISRGR 259