BLASTX nr result

ID: Coptis21_contig00011537 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011537
         (862 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307862.1| predicted protein [Populus trichocarpa] gi|2...   125   2e-26
ref|NP_001239759.1| uncharacterized protein LOC100782360 precurs...   120   4e-25
ref|NP_001236413.1| uncharacterized protein LOC100526951 precurs...   114   3e-23
emb|CAN62855.1| hypothetical protein VITISV_011346 [Vitis vinifera]    99   1e-18
ref|XP_002510146.1| conserved hypothetical protein [Ricinus comm...    84   3e-14

>ref|XP_002307862.1| predicted protein [Populus trichocarpa] gi|222853838|gb|EEE91385.1|
           predicted protein [Populus trichocarpa]
          Length = 369

 Score =  125 bits (313), Expect = 2e-26
 Identities = 88/217 (40%), Positives = 112/217 (51%), Gaps = 38/217 (17%)
 Frame = +2

Query: 26  MANNLKCFSFFLHLTLLVNSIFLA--TEARPLDVLRS--SDCSGGIDAFFYGFSILGMKN 193
           MA  LK  S F+ L L+VNS+F    TEARP ++++S  S  S G ++FF G S+ G+K 
Sbjct: 1   MATTLKSLSSFVIL-LIVNSLFFTGTTEARPFNIMKSGNSAASRGTESFFDGLSLGGIKE 59

Query: 194 SGPSPGGQGHNFVNAQTLXXXXXXXXXXXXXHQFTNAQTLGGIKDS-------------- 331
            GPSPG  GH F N+ TL             H FT++ TLGGIK+               
Sbjct: 60  -GPSPGA-GHEFTNSGTLGGIKEEGPSPSAGHGFTSSGTLGGIKEGPSPGAGHGFTNSGT 117

Query: 332 ------GPSAGGGHKFTDANTLGGIKVSGPSPR--------------GKGHAYTNVQSLG 451
                 GPS G GH FT++ TL GIK  GPSP               G GH +TN ++LG
Sbjct: 118 LGGIKEGPSPGVGHGFTNSGTLEGIKKEGPSPTNSGTLGGIKEGPSPGAGHGFTNSETLG 177

Query: 452 GIKGSINRSGDGHSLIDIQLFGGIKDSGPSPGQGHNY 562
           GIK   +  G GH   +    GGIK+ GPSPG GH +
Sbjct: 178 GIKEGPS-PGVGHEFTNSGTLGGIKE-GPSPGVGHGF 212



 Score =  102 bits (254), Expect = 1e-19
 Identities = 66/139 (47%), Positives = 78/139 (56%), Gaps = 8/139 (5%)
 Frame = +2

Query: 179 LGMKNSGPSPGGQGHNFVNAQTLXXXXXXXXXXXXX--------HQFTNAQTLGGIKDSG 334
           LG    GPSPG  GH F N++TL                     H FTN+ TLGGIK+ G
Sbjct: 234 LGGIKEGPSPGA-GHGFTNSETLGGIKEGPSPGGIKEGSSPGVGHAFTNSGTLGGIKE-G 291

Query: 335 PSAGGGHKFTDANTLGGIKVSGPSPRGKGHAYTNVQSLGGIKGSINRSGDGHSLIDIQLF 514
           PS G GH FT++ TLGGIK  GPSP G GH +TN  +LGGIK   +  G GH   +    
Sbjct: 292 PSPGAGHAFTNSGTLGGIK-EGPSP-GAGHGFTNSGTLGGIKEG-SSPGVGHGFTNSGTL 348

Query: 515 GGIKDSGPSPGQGHNYITG 571
           GGIK+ GPSP  G+ Y TG
Sbjct: 349 GGIKE-GPSPCCGNKYTTG 366



 Score =  101 bits (251), Expect = 3e-19
 Identities = 66/150 (44%), Positives = 80/150 (53%), Gaps = 22/150 (14%)
 Frame = +2

Query: 179 LGMKNSGPSPGGQGHNFVNAQTLXXXXXXXXXXXXXHQFTNAQTLGGIKDSGPSAGGGHK 358
           LG    GPSPG  GH F N++TL             H+FTN+ TLGGIK+ GPS G GH 
Sbjct: 155 LGGIKEGPSPGA-GHGFTNSETLGGIKEGPSPGVG-HEFTNSGTLGGIKE-GPSPGVGHG 211

Query: 359 FTDANTLGGIKVSGPSPR--------------GKGHAYTNVQSLGGIK-----GSINRS- 478
           FT++ TL GIK  GPSP               G GH +TN ++LGGIK     G I    
Sbjct: 212 FTNSGTLEGIKKEGPSPTNSGTLGGIKEGPSPGAGHGFTNSETLGGIKEGPSPGGIKEGS 271

Query: 479 --GDGHSLIDIQLFGGIKDSGPSPGQGHNY 562
             G GH+  +    GGIK+ GPSPG GH +
Sbjct: 272 SPGVGHAFTNSGTLGGIKE-GPSPGAGHAF 300


>ref|NP_001239759.1| uncharacterized protein LOC100782360 precursor [Glycine max]
           gi|255640582|gb|ACU20576.1| unknown [Glycine max]
          Length = 132

 Score =  120 bits (301), Expect = 4e-25
 Identities = 75/170 (44%), Positives = 96/170 (56%), Gaps = 4/170 (2%)
 Frame = +2

Query: 59  LHLTLLVNSIF-LATEARPLDVLRS--SDCSGGIDAFFYGFSILGMKNSGPSPGGQGHNF 229
           L L LLVN +F + +EARPL ++ +  S   G +  FF   S+  MK+SGPSPG      
Sbjct: 8   LVLMLLVNFVFFMGSEARPLSIIETEKSVTGGEVVDFFDWLSLGAMKDSGPSPG------ 61

Query: 230 VNAQTLXXXXXXXXXXXXXHQFTNAQTLGGIKDSGPSAGG-GHKFTDANTLGGIKVSGPS 406
                              H+FTN++TLGGIKDSGPS+GG GH+FT++ TLGGIK SGPS
Sbjct: 62  -----------------VGHKFTNSETLGGIKDSGPSSGGPGHQFTNSQTLGGIKNSGPS 104

Query: 407 PRGKGHAYTNVQSLGGIKGSINRSGDGHSLIDIQLFGGIKDSGPSPGQGH 556
           P G+GH +TN ++L                      G +KDSGPSPGQGH
Sbjct: 105 PGGEGHKFTNSETL----------------------GEMKDSGPSPGQGH 132


>ref|NP_001236413.1| uncharacterized protein LOC100526951 precursor [Glycine max]
           gi|255631234|gb|ACU15984.1| unknown [Glycine max]
          Length = 135

 Score =  114 bits (285), Expect = 3e-23
 Identities = 74/170 (43%), Positives = 94/170 (55%), Gaps = 4/170 (2%)
 Frame = +2

Query: 59  LHLTLLVN-SIFLATEARPLDVLRSS-DCSGGIDAFFYGFSILG-MKNSGPSPGGQGHNF 229
           L L LLVN + F+  EARPL ++ +    +GG +  F+ +  LG MK+SGPSPG      
Sbjct: 11  LVLVLLVNFAFFMGLEARPLSIIETGKSATGGEEVDFFDWLALGAMKDSGPSPG------ 64

Query: 230 VNAQTLXXXXXXXXXXXXXHQFTNAQTLGGIKDSGPSAGG-GHKFTDANTLGGIKVSGPS 406
                              H+FTN++TLGGIKDSGPS GG GH+FT++ TLGGIK SG S
Sbjct: 65  -----------------VGHKFTNSETLGGIKDSGPSPGGKGHQFTNSETLGGIKNSGLS 107

Query: 407 PRGKGHAYTNVQSLGGIKGSINRSGDGHSLIDIQLFGGIKDSGPSPGQGH 556
             G+GH +TN ++L                      G IKDSGPSPGQGH
Sbjct: 108 VGGEGHKFTNSETL----------------------GEIKDSGPSPGQGH 135


>emb|CAN62855.1| hypothetical protein VITISV_011346 [Vitis vinifera]
          Length = 231

 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 67/153 (43%), Positives = 82/153 (53%), Gaps = 2/153 (1%)
 Frame = +2

Query: 26  MANNLKCFSFFLHLTLLVNSIFLATEARPLDVLRSSDCSGGID--AFFYGFSILGMKNSG 199
           MA  LK F  FL L L++NSI  A   RP +VL+      G +   FF G S+  +K SG
Sbjct: 1   MARALK-FVSFLFLVLVLNSI--AIHGRPFNVLKKPRGPDGEEMRGFFDGLSLGAIKQSG 57

Query: 200 PSPGGQGHNFVNAQTLXXXXXXXXXXXXXHQFTNAQTLGGIKDSGPSAGGGHKFTDANTL 379
           PSPG                         H+FTNA TLGGIKDSGPS G GHKFT+A TL
Sbjct: 58  PSPGN-----------------------GHKFTNAGTLGGIKDSGPSPGNGHKFTNAGTL 94

Query: 380 GGIKVSGPSPRGKGHAYTNVQSLGGIKGSINRS 478
           GGIK SGP+P G+GH   + + +      I +S
Sbjct: 95  GGIKDSGPNP-GEGHKELDDEWVSSFAKKIRKS 126



 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 42/70 (60%), Positives = 49/70 (70%)
 Frame = +2

Query: 293 FTNAQTLGGIKDSGPSAGGGHKFTDANTLGGIKVSGPSPRGKGHAYTNVQSLGGIKGSIN 472
           F +  +LG IK SGPS G GHKFT+A TLGGIK SGPSP G GH +TN  +LGGIK S  
Sbjct: 44  FFDGLSLGAIKQSGPSPGNGHKFTNAGTLGGIKDSGPSP-GNGHKFTNAGTLGGIKDSGP 102

Query: 473 RSGDGHSLID 502
             G+GH  +D
Sbjct: 103 NPGEGHKELD 112



 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 40/78 (51%), Positives = 47/78 (60%)
 Frame = +2

Query: 323 KDSGPSAGGGHKFTDANTLGGIKVSGPSPRGKGHAYTNVQSLGGIKGSINRSGDGHSLID 502
           K  GP       F D  +LG IK SGPSP G GH +TN  +LGGIK S    G+GH   +
Sbjct: 32  KPRGPDGEEMRGFFDGLSLGAIKQSGPSP-GNGHKFTNAGTLGGIKDSGPSPGNGHKFTN 90

Query: 503 IQLFGGIKDSGPSPGQGH 556
               GGIKDSGP+PG+GH
Sbjct: 91  AGTLGGIKDSGPNPGEGH 108


>ref|XP_002510146.1| conserved hypothetical protein [Ricinus communis]
           gi|223550847|gb|EEF52333.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 152

 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 64/173 (36%), Positives = 84/173 (48%), Gaps = 8/173 (4%)
 Frame = +2

Query: 50  SFFLHLTLLVNSIFLATEARPLDVLRSSDCSGGIDAFFYGFSILGMKNSGPSPGGQGHNF 229
           S  L + LL +S F  +EARPL + +S   S              + + GPSPGG+GH +
Sbjct: 10  STVLLILLLASSPFFISEARPLKLAKSPHMSY-------------ITSEGPSPGGRGHKY 56

Query: 230 VNAQTLXXXXXXXXXXXXXHQFTNAQTLGGIKDSGPSAGGGHKFT--DANTLGGIKVSGP 403
           +NAQT                       GGIK SGP+ G G+ +T     TLGGIK SGP
Sbjct: 57  INAQTT----------------------GGIKHSGPAPGVGNYYTTKTPQTLGGIKHSGP 94

Query: 404 SPRGKGHAYTNVQS---LGGIK---GSINRSGDGHSLIDIQLFGGIKDSGPSP 544
           S  G+G+ +T       LGGIK    S    G+ ++    Q  GG+K SGPSP
Sbjct: 95  SHGGEGNHHTTSTPRVFLGGIKHSGPSHGGQGNYYTTSAPQTLGGLKHSGPSP 147


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