BLASTX nr result
ID: Coptis21_contig00011523
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00011523
(573 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002315713.1| predicted protein [Populus trichocarpa] gi|2... 134 4e-51
gb|ABK96309.1| unknown [Populus trichocarpa x Populus deltoides] 135 9e-51
ref|XP_002315711.1| predicted protein [Populus trichocarpa] gi|2... 135 2e-50
ref|XP_002284642.1| PREDICTED: 1-aminocyclopropane-1-carboxylate... 129 4e-49
emb|CBI23591.3| unnamed protein product [Vitis vinifera] 129 4e-49
>ref|XP_002315713.1| predicted protein [Populus trichocarpa] gi|222864753|gb|EEF01884.1|
predicted protein [Populus trichocarpa]
Length = 379
Score = 134 bits (338), Expect(2) = 4e-51
Identities = 60/85 (70%), Positives = 72/85 (84%)
Frame = +2
Query: 2 FELLSEALGLKADHLKQMNCAESCALVSHYYPSCPEPELTLGTASHTDPTYLTVLLQDNI 181
F LLSEALGLK DHL++M+CAE AL+SHYYP+CPEPELTLGT+ H+D +LTVLLQD I
Sbjct: 200 FGLLSEALGLKTDHLEKMDCAEGLALISHYYPACPEPELTLGTSKHSDNDFLTVLLQDQI 259
Query: 182 GGLQVLHDGHWIDVHPIPGASVINI 256
GGLQ+LH W+D+ P+PGA VINI
Sbjct: 260 GGLQMLHQDQWVDIPPVPGALVINI 284
Score = 92.4 bits (228), Expect(2) = 4e-51
Identities = 40/68 (58%), Positives = 55/68 (80%)
Frame = +3
Query: 255 FKSIEHRVLANHVGPRVSVACFLTPRFDMATKPFGPIKELISDESHPVYREISMSEYLAQ 434
FKS+EHRVLAN VGPR+SVACF + F ++K +GPIKEL+S+ + P+YRE +++EYL+
Sbjct: 303 FKSVEHRVLANRVGPRISVACFFSTSFQPSSKLYGPIKELLSEYNPPIYRETTVNEYLSY 362
Query: 435 FFSQGLDG 458
F+ GLDG
Sbjct: 363 FYDHGLDG 370
>gb|ABK96309.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 370
Score = 135 bits (339), Expect(2) = 9e-51
Identities = 58/85 (68%), Positives = 72/85 (84%)
Frame = +2
Query: 2 FELLSEALGLKADHLKQMNCAESCALVSHYYPSCPEPELTLGTASHTDPTYLTVLLQDNI 181
FELLSEALGLK+DHLK+M+C + AL+SHYYP+CPEPEL +GT H+DP +LT+LLQD+I
Sbjct: 198 FELLSEALGLKSDHLKEMDCVKGHALLSHYYPACPEPELAMGTTKHSDPDFLTILLQDDI 257
Query: 182 GGLQVLHDGHWIDVHPIPGASVINI 256
GGLQ+ H HWIDV P+ GA V+NI
Sbjct: 258 GGLQIFHQNHWIDVPPVHGALVVNI 282
Score = 90.9 bits (224), Expect(2) = 9e-51
Identities = 42/77 (54%), Positives = 60/77 (77%), Gaps = 1/77 (1%)
Frame = +3
Query: 255 FKSIEHRVLANHVGPRVSVACFLTPRFDMATKPFGPIKELISDESHPVYREISMSEYLAQ 434
FKS+EHRV+ANH+GPRVSVA F TP +T+ +GPIKEL+S+E+ P+Y EI++ +++A
Sbjct: 294 FKSVEHRVVANHIGPRVSVASFFTPHLYPSTRLYGPIKELLSEENPPIYCEITVKDFIAY 353
Query: 435 FFSQGLDG-KCMSSFKL 482
+ S+GLDG + FKL
Sbjct: 354 YDSKGLDGNSALPHFKL 370
>ref|XP_002315711.1| predicted protein [Populus trichocarpa] gi|222864751|gb|EEF01882.1|
predicted protein [Populus trichocarpa]
Length = 374
Score = 135 bits (339), Expect(2) = 2e-50
Identities = 58/85 (68%), Positives = 72/85 (84%)
Frame = +2
Query: 2 FELLSEALGLKADHLKQMNCAESCALVSHYYPSCPEPELTLGTASHTDPTYLTVLLQDNI 181
FELLSEALGLK+DHLK+M+C + AL+SHYYP+CPEPEL +GT H+DP +LT+LLQD+I
Sbjct: 198 FELLSEALGLKSDHLKEMDCVKGHALLSHYYPACPEPELAMGTTKHSDPDFLTILLQDDI 257
Query: 182 GGLQVLHDGHWIDVHPIPGASVINI 256
GGLQ+ H HWIDV P+ GA V+NI
Sbjct: 258 GGLQIFHQNHWIDVPPVHGALVVNI 282
Score = 89.7 bits (221), Expect(2) = 2e-50
Identities = 39/68 (57%), Positives = 56/68 (82%)
Frame = +3
Query: 255 FKSIEHRVLANHVGPRVSVACFLTPRFDMATKPFGPIKELISDESHPVYREISMSEYLAQ 434
FKS+EHRV+ANH+GPRVSVA F TP +T+ +GPIKEL+S+E+ P+Y EI++ +++A
Sbjct: 298 FKSVEHRVVANHIGPRVSVASFFTPHLYPSTRLYGPIKELLSEENPPIYCEITVKDFIAY 357
Query: 435 FFSQGLDG 458
+ S+GLDG
Sbjct: 358 YDSKGLDG 365
>ref|XP_002284642.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1
[Vitis vinifera] gi|147807864|emb|CAN66433.1|
hypothetical protein VITISV_027452 [Vitis vinifera]
Length = 365
Score = 129 bits (324), Expect(2) = 4e-49
Identities = 57/85 (67%), Positives = 68/85 (80%)
Frame = +2
Query: 2 FELLSEALGLKADHLKQMNCAESCALVSHYYPSCPEPELTLGTASHTDPTYLTVLLQDNI 181
FEL+SEALGL +HLK M+C E +++ HYYPSCP+PELT+GT H D +LTVLLQD I
Sbjct: 193 FELISEALGLNPNHLKDMDCTEGLSILCHYYPSCPQPELTMGTTKHADNDFLTVLLQDQI 252
Query: 182 GGLQVLHDGHWIDVHPIPGASVINI 256
GGLQVLH G WIDV P+PGA VIN+
Sbjct: 253 GGLQVLHQGQWIDVPPMPGALVINV 277
Score = 91.3 bits (225), Expect(2) = 4e-49
Identities = 44/77 (57%), Positives = 60/77 (77%), Gaps = 3/77 (3%)
Frame = +3
Query: 237 VLQL*T---FKSIEHRVLANHVGPRVSVACFLTPRFDMATKPFGPIKELISDESHPVYRE 407
+LQL T FKS+EHRVLANH+GPRVSVACF + ++K +GPIKEL+S+E+ P Y+E
Sbjct: 280 LLQLITNDRFKSVEHRVLANHIGPRVSVACFFSTSIQPSSKLYGPIKELLSEENPPKYKE 339
Query: 408 ISMSEYLAQFFSQGLDG 458
++ +Y+A F S+GLDG
Sbjct: 340 TTVGDYVAYFNSKGLDG 356
>emb|CBI23591.3| unnamed protein product [Vitis vinifera]
Length = 206
Score = 129 bits (324), Expect(2) = 4e-49
Identities = 57/85 (67%), Positives = 68/85 (80%)
Frame = +2
Query: 2 FELLSEALGLKADHLKQMNCAESCALVSHYYPSCPEPELTLGTASHTDPTYLTVLLQDNI 181
FEL+SEALGL +HLK M+C E +++ HYYPSCP+PELT+GT H D +LTVLLQD I
Sbjct: 34 FELISEALGLNPNHLKDMDCTEGLSILCHYYPSCPQPELTMGTTKHADNDFLTVLLQDQI 93
Query: 182 GGLQVLHDGHWIDVHPIPGASVINI 256
GGLQVLH G WIDV P+PGA VIN+
Sbjct: 94 GGLQVLHQGQWIDVPPMPGALVINV 118
Score = 91.3 bits (225), Expect(2) = 4e-49
Identities = 44/77 (57%), Positives = 60/77 (77%), Gaps = 3/77 (3%)
Frame = +3
Query: 237 VLQL*T---FKSIEHRVLANHVGPRVSVACFLTPRFDMATKPFGPIKELISDESHPVYRE 407
+LQL T FKS+EHRVLANH+GPRVSVACF + ++K +GPIKEL+S+E+ P Y+E
Sbjct: 121 LLQLITNDRFKSVEHRVLANHIGPRVSVACFFSTSIQPSSKLYGPIKELLSEENPPKYKE 180
Query: 408 ISMSEYLAQFFSQGLDG 458
++ +Y+A F S+GLDG
Sbjct: 181 TTVGDYVAYFNSKGLDG 197