BLASTX nr result

ID: Coptis21_contig00011497 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011497
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_178744.3| prefoldin 1 [Arabidopsis thaliana] gi|330250953...    80   1e-19
ref|XP_002883761.1| hypothetical protein ARALYDRAFT_480234 [Arab...    81   2e-19
ref|NP_850990.1| prefoldin 1 [Arabidopsis thaliana] gi|15081640|...    79   6e-19
ref|XP_004172737.1| PREDICTED: probable prefoldin subunit 1-like...    76   2e-18
ref|XP_002264879.2| PREDICTED: probable prefoldin subunit 1 [Vit...    76   5e-18

>ref|NP_178744.3| prefoldin 1 [Arabidopsis thaliana] gi|330250953|gb|AEC06047.1|
           prefoldin 1 [Arabidopsis thaliana]
          Length = 127

 Score = 80.5 bits (197), Expect(2) = 1e-19
 Identities = 39/48 (81%), Positives = 43/48 (89%)
 Frame = +1

Query: 4   MIEATGKLKQVVAQMRNKETEKKRAFLTLEELRPLPEDTNTYKSVGFF 147
           MIE TGKLKQV  QMRNKE ++KRAFLTLEELRPLPE+TNTYKS+G F
Sbjct: 17  MIELTGKLKQVQNQMRNKEGDRKRAFLTLEELRPLPEETNTYKSIGKF 64



 Score = 40.8 bits (94), Expect(2) = 1e-19
 Identities = 21/34 (61%), Positives = 25/34 (73%)
 Frame = +3

Query: 123 YVQICWFLLEPKSVLVDEQEKKLMDSENVIASLQ 224
           Y  I  F+LEPK+VL  EQE+KL DSE  +ASLQ
Sbjct: 58  YKSIGKFVLEPKTVLEGEQEQKLKDSEAAVASLQ 91


>ref|XP_002883761.1| hypothetical protein ARALYDRAFT_480234 [Arabidopsis lyrata subsp.
           lyrata] gi|297329601|gb|EFH60020.1| hypothetical protein
           ARALYDRAFT_480234 [Arabidopsis lyrata subsp. lyrata]
          Length = 128

 Score = 80.9 bits (198), Expect(2) = 2e-19
 Identities = 39/46 (84%), Positives = 42/46 (91%)
 Frame = +1

Query: 4   MIEATGKLKQVVAQMRNKETEKKRAFLTLEELRPLPEDTNTYKSVG 141
           MIE TGKLKQV  QMRNKE ++KRAFLTLEELRPLPEDTNTYKS+G
Sbjct: 17  MIELTGKLKQVQNQMRNKEGDRKRAFLTLEELRPLPEDTNTYKSIG 62



 Score = 39.7 bits (91), Expect(2) = 2e-19
 Identities = 19/28 (67%), Positives = 23/28 (82%)
 Frame = +3

Query: 141 FLLEPKSVLVDEQEKKLMDSENVIASLQ 224
           F+LEPK+VL  EQE+KL DSE  +ASLQ
Sbjct: 65  FVLEPKTVLEGEQEQKLKDSEAAVASLQ 92


>ref|NP_850990.1| prefoldin 1 [Arabidopsis thaliana] gi|15081640|gb|AAK82475.1|
           At2g07350/T13E11.12 [Arabidopsis thaliana]
           gi|20334838|gb|AAM16175.1| At2g07350/T13E11.12
           [Arabidopsis thaliana] gi|21592911|gb|AAM64861.1|
           unknown [Arabidopsis thaliana]
           gi|330250954|gb|AEC06048.1| prefoldin 1 [Arabidopsis
           thaliana]
          Length = 128

 Score = 79.3 bits (194), Expect(2) = 6e-19
 Identities = 38/46 (82%), Positives = 42/46 (91%)
 Frame = +1

Query: 4   MIEATGKLKQVVAQMRNKETEKKRAFLTLEELRPLPEDTNTYKSVG 141
           MIE TGKLKQV  QMRNKE ++KRAFLTLEELRPLPE+TNTYKS+G
Sbjct: 17  MIELTGKLKQVQNQMRNKEGDRKRAFLTLEELRPLPEETNTYKSIG 62



 Score = 39.7 bits (91), Expect(2) = 6e-19
 Identities = 19/28 (67%), Positives = 23/28 (82%)
 Frame = +3

Query: 141 FLLEPKSVLVDEQEKKLMDSENVIASLQ 224
           F+LEPK+VL  EQE+KL DSE  +ASLQ
Sbjct: 65  FVLEPKTVLEGEQEQKLKDSEAAVASLQ 92


>ref|XP_004172737.1| PREDICTED: probable prefoldin subunit 1-like [Cucumis sativus]
          Length = 117

 Score = 75.9 bits (185), Expect(2) = 2e-18
 Identities = 37/47 (78%), Positives = 41/47 (87%)
 Frame = +1

Query: 1   RMIEATGKLKQVVAQMRNKETEKKRAFLTLEELRPLPEDTNTYKSVG 141
           RMIE TGKLKQ+  Q+RNKE EKKRAFLTLEEL+ L EDTNTYKS+G
Sbjct: 16  RMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLAEDTNTYKSIG 62



 Score = 41.2 bits (95), Expect(2) = 2e-18
 Identities = 26/50 (52%), Positives = 31/50 (62%)
 Frame = +3

Query: 141 FLLEPKSVLVDEQEKKLMDSENVIASLQVI*SDAVSGNQLKSTPSFLIVY 290
           F+LE KSVL++EQE+K  DSE  IASLQV    +       ST  F IVY
Sbjct: 65  FVLESKSVLMNEQEQKFKDSETAIASLQVHIKISFLCRDGTSTFLFPIVY 114


>ref|XP_002264879.2| PREDICTED: probable prefoldin subunit 1 [Vitis vinifera]
          Length = 129

 Score = 76.3 bits (186), Expect(2) = 5e-18
 Identities = 38/46 (82%), Positives = 40/46 (86%)
 Frame = +1

Query: 4   MIEATGKLKQVVAQMRNKETEKKRAFLTLEELRPLPEDTNTYKSVG 141
           MIE TGKLKQV  QMRNKE EKKRAFLTLEELR L +DTNTYKS+G
Sbjct: 17  MIETTGKLKQVQNQMRNKEGEKKRAFLTLEELRQLSDDTNTYKSIG 62



 Score = 39.7 bits (91), Expect(2) = 5e-18
 Identities = 19/28 (67%), Positives = 22/28 (78%)
 Frame = +3

Query: 141 FLLEPKSVLVDEQEKKLMDSENVIASLQ 224
           F+LEPKS L+ EQE+KL DSE  IA LQ
Sbjct: 65  FVLEPKSALMSEQEQKLKDSEAAIAGLQ 92


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