BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011494
         (821 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264127.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...   275   1e-71
emb|CAN61277.1| hypothetical protein VITISV_002607 [Vitis vinifera]   272   7e-71
ref|XP_004136521.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...   258   9e-67
ref|XP_002309257.1| predicted protein [Populus trichocarpa] gi|2...   258   1e-66
ref|XP_002322776.1| predicted protein [Populus trichocarpa] gi|2...   256   4e-66

>ref|XP_002264127.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Vitis
           vinifera]
          Length = 311

 Score =  275 bits (702), Expect = 1e-71
 Identities = 136/169 (80%), Positives = 151/169 (89%)
 Frame = -2

Query: 523 EASRLYVGNLPYAMTSSELTDIFTEAGRVTSVEIVYDRVTDRSRGFGFVTMQTVDEAKEA 344
           EASRLYVGNLPY+MTSS+L D+F EAG V SVEIVYDRVTDRSRGF FVTM +V EAKEA
Sbjct: 101 EASRLYVGNLPYSMTSSQLGDVFNEAGSVISVEIVYDRVTDRSRGFAFVTMGSVQEAKEA 160

Query: 343 IRMFNGALVGGRTVKVNFPEVPRGGEREVMGPKIRSSYRGFVESPYKIYAGNLSWRLTSE 164
           IRMF+G+ VGGRTVKVNFPEVPRGGER VMGPKIRSSYRGFV+SPYKIYAGNLSWRLTSE
Sbjct: 161 IRMFDGSQVGGRTVKVNFPEVPRGGERAVMGPKIRSSYRGFVDSPYKIYAGNLSWRLTSE 220

Query: 163 GLRDAFDGQPGLLSARVIYERDSGRSRGFGFITFATMRDAQSALDRSEE 17
           GLRDAF   PGLL A+VIYER+SGRSRGFGF++FA+  +A+SAL+   E
Sbjct: 221 GLRDAFADHPGLLGAKVIYERESGRSRGFGFLSFASAENAESALNAMNE 269



 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 33/102 (32%), Positives = 55/102 (53%), Gaps = 8/102 (7%)
 Frame = -2

Query: 514 RLYVGNLPYAMTSSELTDIFTEAGRVTSVEIVYDRVTDRSRGFGFVTMQTVDEAKEAIRM 335
           ++Y GNL + +TS  L D F +   +   +++Y+R + RSRGFGF++  + + A+ A+  
Sbjct: 207 KIYAGNLSWRLTSEGLRDAFADHPGLLGAKVIYERESGRSRGFGFLSFASAENAESALNA 266

Query: 334 FNGALVGGRTVKVNF-----PEVPRGG---EREVMGPKIRSS 233
            N   V GR +++N      P  P  G   ER V   ++ SS
Sbjct: 267 MNEVEVEGRPLRLNLAAVRAPPAPSPGPGLERNVDNSELISS 308


>emb|CAN61277.1| hypothetical protein VITISV_002607 [Vitis vinifera]
          Length = 454

 Score =  272 bits (695), Expect = 7e-71
 Identities = 135/169 (79%), Positives = 151/169 (89%)
 Frame = -2

Query: 523 EASRLYVGNLPYAMTSSELTDIFTEAGRVTSVEIVYDRVTDRSRGFGFVTMQTVDEAKEA 344
           EASRLYVGNLPY+MTSS+L  +F EAG V SVEIVYDRVTDRSRGF FVTM +V EAKEA
Sbjct: 244 EASRLYVGNLPYSMTSSQLGXVFNEAGSVISVEIVYDRVTDRSRGFAFVTMGSVQEAKEA 303

Query: 343 IRMFNGALVGGRTVKVNFPEVPRGGEREVMGPKIRSSYRGFVESPYKIYAGNLSWRLTSE 164
           IRMF+G+ VGGRTVKVNFPEVPRGGER VMGPKIRSSYRGFV+SPYKIYAGNLSWRLTSE
Sbjct: 304 IRMFDGSQVGGRTVKVNFPEVPRGGERAVMGPKIRSSYRGFVDSPYKIYAGNLSWRLTSE 363

Query: 163 GLRDAFDGQPGLLSARVIYERDSGRSRGFGFITFATMRDAQSALDRSEE 17
           GLRDAF   PGLL A+VIYER+SGRSRGFGF++FA+  +A+SAL+  +E
Sbjct: 364 GLRDAFADXPGLLGAKVIYERESGRSRGFGFLSFASAENAESALNAMBE 412



 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 8/102 (7%)
 Frame = -2

Query: 514 RLYVGNLPYAMTSSELTDIFTEAGRVTSVEIVYDRVTDRSRGFGFVTMQTVDEAKEAIRM 335
           ++Y GNL + +TS  L D F +   +   +++Y+R + RSRGFGF++  + + A+ A+  
Sbjct: 350 KIYAGNLSWRLTSEGLRDAFADXPGLLGAKVIYERESGRSRGFGFLSFASAENAESALNA 409

Query: 334 FNGALVGGRTVKVNF-----PEVPRGG---EREVMGPKIRSS 233
            +   V GR +++N      P  P  G   ER V   ++ SS
Sbjct: 410 MBEVEVEGRPLRLNLAAVRAPPAPSPGPGLERNVDNSELISS 451


>ref|XP_004136521.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus] gi|449528229|ref|XP_004171108.1| PREDICTED: 33
           kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus]
          Length = 323

 Score =  258 bits (660), Expect = 9e-67
 Identities = 119/172 (69%), Positives = 152/172 (88%)
 Frame = -2

Query: 544 RKPVVAIEASRLYVGNLPYAMTSSELTDIFTEAGRVTSVEIVYDRVTDRSRGFGFVTMQT 365
           +K  V+ EA +LY+GNLPYAMTSS+L+++F EAG V SV+++YD+VTDRSRGF FVTM T
Sbjct: 106 QKVSVSREAGKLYIGNLPYAMTSSQLSEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMAT 165

Query: 364 VDEAKEAIRMFNGALVGGRTVKVNFPEVPRGGEREVMGPKIRSSYRGFVESPYKIYAGNL 185
           ++EAKEAIRMF+G+ +GGRTV+VNFPEVPRGGE+EVMGP+IRSSY  FV+SP+KIYAGNL
Sbjct: 166 LEEAKEAIRMFDGSQIGGRTVRVNFPEVPRGGEKEVMGPRIRSSYNKFVDSPHKIYAGNL 225

Query: 184 SWRLTSEGLRDAFDGQPGLLSARVIYERDSGRSRGFGFITFATMRDAQSALD 29
            W LTS+ LRDAF+ QPG+LSA++IY+R SG+SRGFGF++F T  DA+SAL+
Sbjct: 226 GWGLTSQSLRDAFENQPGILSAKIIYDRASGKSRGFGFVSFETAEDAESALE 277



 Score = 70.1 bits (170), Expect = 6e-10
 Identities = 30/74 (40%), Positives = 48/74 (64%)
 Frame = -2

Query: 514 RLYVGNLPYAMTSSELTDIFTEAGRVTSVEIVYDRVTDRSRGFGFVTMQTVDEAKEAIRM 335
           ++Y GNL + +TS  L D F     + S +I+YDR + +SRGFGFV+ +T ++A+ A+  
Sbjct: 219 KIYAGNLGWGLTSQSLRDAFENQPGILSAKIIYDRASGKSRGFGFVSFETAEDAESALES 278

Query: 334 FNGALVGGRTVKVN 293
            NG  V GR +++N
Sbjct: 279 MNGVEVEGRPLRLN 292


>ref|XP_002309257.1| predicted protein [Populus trichocarpa] gi|222855233|gb|EEE92780.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score =  258 bits (658), Expect = 1e-66
 Identities = 121/169 (71%), Positives = 149/169 (88%)
 Frame = -2

Query: 535 VVAIEASRLYVGNLPYAMTSSELTDIFTEAGRVTSVEIVYDRVTDRSRGFGFVTMQTVDE 356
           + A E  +LYVGNLPY+MTSSELT++F EAGRV S E++YDRVTDRSRGFGFVTM +V+E
Sbjct: 107 IKATEEGKLYVGNLPYSMTSSELTEVFEEAGRVFSAEVIYDRVTDRSRGFGFVTMGSVEE 166

Query: 355 AKEAIRMFNGALVGGRTVKVNFPEVPRGGEREVMGPKIRSSYRGFVESPYKIYAGNLSWR 176
           AK+AI+MFNG   GGR+V+VNFPEVPRGGEREVMGP+I+S Y+GF++S +KIYAGNL WR
Sbjct: 167 AKKAIQMFNGTQFGGRSVRVNFPEVPRGGEREVMGPRIQSGYKGFIDSEHKIYAGNLGWR 226

Query: 175 LTSEGLRDAFDGQPGLLSARVIYERDSGRSRGFGFITFATMRDAQSALD 29
           LTSEGLRDAF  QPG+LSA+VIYERDS RSRGFGF++F +  +A++AL+
Sbjct: 227 LTSEGLRDAFANQPGVLSAKVIYERDSRRSRGFGFVSFESAENAEAALE 275



 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 29/74 (39%), Positives = 47/74 (63%)
 Frame = -2

Query: 514 RLYVGNLPYAMTSSELTDIFTEAGRVTSVEIVYDRVTDRSRGFGFVTMQTVDEAKEAIRM 335
           ++Y GNL + +TS  L D F     V S +++Y+R + RSRGFGFV+ ++ + A+ A+  
Sbjct: 217 KIYAGNLGWRLTSEGLRDAFANQPGVLSAKVIYERDSRRSRGFGFVSFESAENAEAALEA 276

Query: 334 FNGALVGGRTVKVN 293
            NG  V GR +++N
Sbjct: 277 MNGEEVEGRPMRLN 290


>ref|XP_002322776.1| predicted protein [Populus trichocarpa] gi|222867406|gb|EEF04537.1|
           predicted protein [Populus trichocarpa]
          Length = 324

 Score =  256 bits (654), Expect = 4e-66
 Identities = 124/172 (72%), Positives = 151/172 (87%), Gaps = 3/172 (1%)
 Frame = -2

Query: 535 VVAIEA---SRLYVGNLPYAMTSSELTDIFTEAGRVTSVEIVYDRVTDRSRGFGFVTMQT 365
           VVAI+A    +LYVGNLPY+MTSSEL ++F EAGRV   E++ DRVTDRSRGFGFVTM++
Sbjct: 107 VVAIKAREEGKLYVGNLPYSMTSSELAEVFEEAGRVFGAEVICDRVTDRSRGFGFVTMES 166

Query: 364 VDEAKEAIRMFNGALVGGRTVKVNFPEVPRGGEREVMGPKIRSSYRGFVESPYKIYAGNL 185
           V+EAKEAIRMFNG+ VGGRT++VNFPEVPRGGEREVM P+IRS Y+GF++S +KIYAGNL
Sbjct: 167 VEEAKEAIRMFNGSQVGGRTLRVNFPEVPRGGEREVMEPRIRSGYKGFIDSEHKIYAGNL 226

Query: 184 SWRLTSEGLRDAFDGQPGLLSARVIYERDSGRSRGFGFITFATMRDAQSALD 29
            WRLTSEGL DAF  QPGLLSA+VIYERD+GRSRGFGF++F +  +A++AL+
Sbjct: 227 GWRLTSEGLGDAFANQPGLLSAKVIYERDTGRSRGFGFVSFDSAENAEAALE 278



 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 35/101 (34%), Positives = 55/101 (54%)
 Frame = -2

Query: 514 RLYVGNLPYAMTSSELTDIFTEAGRVTSVEIVYDRVTDRSRGFGFVTMQTVDEAKEAIRM 335
           ++Y GNL + +TS  L D F     + S +++Y+R T RSRGFGFV+  + + A+ A+  
Sbjct: 220 KIYAGNLGWRLTSEGLGDAFANQPGLLSAKVIYERDTGRSRGFGFVSFDSAENAEAALEA 279

Query: 334 FNGALVGGRTVKVNFPEVPRGGEREVMGPKIRSSYRGFVES 212
            NG  V GR +++N       GER    P   ++    +ES
Sbjct: 280 MNGEEVDGRPLRLNL-----AGERSYPPPAKENNTEDNLES 315