BLASTX nr result

ID: Coptis21_contig00011479 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011479
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332784.1| BED finger-nbs-lrr resistance protein [Popul...   149   2e-34
ref|XP_002329502.1| BED finger-nbs-lrr resistance protein [Popul...   147   7e-34
ref|XP_002337280.1| BED finger-nbs-lrr resistance protein [Popul...   147   9e-34
ref|XP_002333416.1| BED finger-nbs-lrr resistance protein [Popul...   145   4e-33
ref|XP_002332020.1| BED finger-nbs-lrr resistance protein [Popul...   142   3e-32

>ref|XP_002332784.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222833193|gb|EEE71670.1| BED finger-nbs-lrr resistance
            protein [Populus trichocarpa]
          Length = 1012

 Score =  149 bits (377), Expect = 2e-34
 Identities = 80/183 (43%), Positives = 113/183 (61%), Gaps = 12/183 (6%)
 Frame = +3

Query: 3    PLAIITTGGAMRGKDGIQEWRFALKDLRDSTCWVMDVEKVFKCLKFSFDQLGNESIKKCF 182
            PL IIT  G++RG D + EWR  LK LR+S    MD EKVFK L+ S+D+LGN ++++C 
Sbjct: 541  PLGIITMAGSLRGVDDLHEWRNTLKKLRESEFRDMD-EKVFKLLRLSYDRLGNLALQQCL 599

Query: 183  LCCALYPEDFNIPEDELIDYWINEALIKERCRQEENDKGQFILNKLKNCCMLQSCHAAM- 359
            L CAL+PED+ I    LI Y I+E +IK R R +  DKG  +LN+L+N C+L+S      
Sbjct: 600  LYCALFPEDYRIKRKRLIGYLIDEGIIKRRSRGDAFDKGHTMLNRLENVCLLESAKMNYD 659

Query: 360  ---------VYYRS--YVQMHDLLRDLALKITATSQNVLVRAGTKLEEISDVSNWVENLE 506
                     +YY     V+MHDL+RD+A++I   +   +V+AG +L+E+ D   W ENL 
Sbjct: 660  DSRRVKMHDMYYDDCRRVKMHDLIRDMAIQILLENSQGMVKAGAQLKELPDAEEWTENLT 719

Query: 507  KAS 515
              S
Sbjct: 720  MVS 722


>ref|XP_002329502.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222870182|gb|EEF07313.1| BED finger-nbs-lrr
           resistance protein [Populus trichocarpa]
          Length = 979

 Score =  147 bits (372), Expect = 7e-34
 Identities = 73/172 (42%), Positives = 117/172 (68%), Gaps = 1/172 (0%)
 Frame = +3

Query: 3   PLAIITTGGAMRGKDGIQEWRFALKDLRDSTCWVMDVEKVFKCLKFSFDQLGNESIKKCF 182
           PL IIT  G++RG D I EWR  LK L++S    M+ ++VF+ L+FS+D+L + +++KC 
Sbjct: 346 PLGIITVAGSLRGVDDIHEWRNTLKRLKESKLRDME-DEVFRLLRFSYDRLDDLALQKCL 404

Query: 183 LCCALYPEDFNIPEDELIDYWINEALIKE-RCRQEENDKGQFILNKLKNCCMLQSCHAAM 359
           L C L+PED  I  +ELIDY I+E +++    RQEE+D+G  +LN+L++ C+L+     +
Sbjct: 405 LYCTLFPEDHKIEREELIDYLIDEGIVEGIGRRQEEHDEGHTMLNRLEDVCLLE--WGRL 462

Query: 360 VYYRSYVQMHDLLRDLALKITATSQNVLVRAGTKLEEISDVSNWVENLEKAS 515
              R +V+MHDL+RD+A++I   + +V+++AG +L E+ D   W ENL + S
Sbjct: 463 CNVRRFVKMHDLIRDMAIQILQENSHVIIQAGAQLRELPDAEEWTENLTRVS 514


>ref|XP_002337280.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222838678|gb|EEE77043.1| BED finger-nbs-lrr
           resistance protein [Populus trichocarpa]
          Length = 577

 Score =  147 bits (371), Expect = 9e-34
 Identities = 75/172 (43%), Positives = 114/172 (66%), Gaps = 1/172 (0%)
 Frame = +3

Query: 3   PLAIITTGGAMRGKDGIQEWRFALKDLRDSTCWVMDVEKVFKCLKFSFDQLGNESIKKCF 182
           PL IIT  G++R  D + EWR  LK L++S C  M  +KVF+ L+FS+DQL + ++++C 
Sbjct: 344 PLGIITIAGSLRRVDDLHEWRNTLKKLKESKCRDMG-DKVFRLLRFSYDQLHDLALQQCL 402

Query: 183 LCCALYPEDFNIPEDELIDYWINEALIKE-RCRQEENDKGQFILNKLKNCCMLQSCHAAM 359
           L CAL+PED+ I  ++LIDY I+E +I+    RQE  D+G  +LN+L++ C+L+   A  
Sbjct: 403 LYCALFPEDYEIVREKLIDYLIDEEVIERVESRQEAVDEGHTMLNRLESVCLLEG--ANN 460

Query: 360 VYYRSYVQMHDLLRDLALKITATSQNVLVRAGTKLEEISDVSNWVENLEKAS 515
           VY   Y +MHDL+RD+A++I   +   +V+AG +L E+ D   W ENL + S
Sbjct: 461 VYGDRYFKMHDLIRDMAIQILQENSQGMVKAGARLREVPDAEEWTENLTRVS 512


>ref|XP_002333416.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222836514|gb|EEE74921.1| BED finger-nbs-lrr
           resistance protein [Populus trichocarpa]
          Length = 900

 Score =  145 bits (365), Expect = 4e-33
 Identities = 78/173 (45%), Positives = 118/173 (68%), Gaps = 2/173 (1%)
 Frame = +3

Query: 3   PLAIITTGGAMRGKDGIQEWRFALKDLRDSTCWVMDVEKVFKCLKFSFDQLGNESIKKCF 182
           PL IIT  G++RG D + +WR  L  LR+S    +D EKVF+ L+FS+D+LG+ ++++C 
Sbjct: 276 PLGIITVAGSLRGVDDLHQWRNTLTKLRESEFRDID-EKVFRLLRFSYDRLGDLALQQCL 334

Query: 183 LCCALYPEDFNIPEDELIDYWINEALIK-ERCRQEENDKGQFILNKLKNCCMLQSCHAAM 359
           L CAL+PED +I  +ELI Y I+E +IK +R R +  D+G  +LNKL+N C+L+S  A M
Sbjct: 335 LYCALFPEDDHIKREELIGYLIDEGIIKRKRSRGDAFDEGHTMLNKLENVCLLES--AKM 392

Query: 360 VYYRS-YVQMHDLLRDLALKITATSQNVLVRAGTKLEEISDVSNWVENLEKAS 515
            Y  S   +MHDL+RD+A++I   +   +V+AG +L+E+ D   W+ENL + S
Sbjct: 393 DYDGSRCFKMHDLIRDMAIQILLENSQGMVKAGAQLKELPDAEEWMENLTRVS 445


>ref|XP_002332020.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222875245|gb|EEF12376.1| BED finger-nbs-lrr
           resistance protein [Populus trichocarpa]
          Length = 1093

 Score =  142 bits (358), Expect = 3e-32
 Identities = 76/172 (44%), Positives = 112/172 (65%), Gaps = 1/172 (0%)
 Frame = +3

Query: 3   PLAIITTGGAMRGKDGIQEWRFALKDLRDSTCWVMDVEKVFKCLKFSFDQLGNESIKKCF 182
           PL II   G++RG D + +WR  L  LR+S    MD EKVFK LKFS+D+LG+ ++K+C 
Sbjct: 472 PLGIIAVAGSLRGVDDLHDWRNTLNKLRESEFRDMD-EKVFKLLKFSYDRLGDLALKQCL 530

Query: 183 LCCALYPEDFNIPEDELIDYWINEALIK-ERCRQEENDKGQFILNKLKNCCMLQSCHAAM 359
           L CAL+PED  I    LI Y I+E +IK +R R +  D+G  +LN+L+N C+L+S   A 
Sbjct: 531 LYCALFPEDDRIKRKRLIGYLIDEGIIKGKRTRGDAFDEGHTMLNRLENVCLLES---AN 587

Query: 360 VYYRSYVQMHDLLRDLALKITATSQNVLVRAGTKLEEISDVSNWVENLEKAS 515
                 V+MHDL+RD+A++I   +   +V+AG +L+E+ D   W++NL + S
Sbjct: 588 CNNGRRVKMHDLIRDMAIQILLENSQGMVKAGAQLKELPDAEEWMKNLTRVS 639


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